RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 USP1O94782 785 aa2.47□□□□□ -2.01
CDC40-204ENST00000431461 OAZ2O95190 189 aa2.47□□□□□ -2.01
CDC40-204ENST00000431461 FESP07332 822 aa2.47□□□□□ -2.01
CDC40-204ENST00000431461 TMEM191BP0C7N4 346 aa2.47□□□□□ -2.01
CDC40-204ENST00000431461 SRGAP2BP0DMP2 458 aa2.47□□□□□ -2.01
CDC40-204ENST00000431461 DUSP1P28562 367 aa2.47□□□□□ -2.01
CDC40-204ENST00000431461 CYP2C18P33260 490 aa2.47□□□□□ -2.01
CDC40-204ENST00000431461 GSTM5P46439 218 aa2.47□□□□□ -2.01
CDC40-204ENST00000431461 FHL3Q13643 280 aa2.47□□□□□ -2.01
CDC40-204ENST00000431461 EFR3AQ14156 821 aa2.47□□□□□ -2.01
CDC40-204ENST00000431461 SPARCL1Q14515 664 aa2.47□□□□□ -2.01
CDC40-204ENST00000431461 ACOX1Q15067 660 aa2.47□□□□□ -2.01
CDC40-204ENST00000431461 ZIK1Q3SY52 487 aaPredicted RBP2.47□□□□□ -2.01
CDC40-204ENST00000431461 CCDC38Q502W7 563 aa2.47□□□□□ -2.01
CDC40-204ENST00000431461 PCID2Q5JVF3 399 aa2.47□□□□□ -2.01
CDC40-204ENST00000431461 KLHDC7AQ5VTJ3 777 aa2.47□□□□□ -2.01
CDC40-204ENST00000431461 ABLIM2Q6H8Q1 611 aa2.47□□□□□ -2.01
CDC40-204ENST00000431461 MIS18BP1Q6P0N0 1132 aa2.47□□□□□ -2.01
CDC40-204ENST00000431461 COL23A1Q86Y22 540 aaPredicted RBP2.47□□□□□ -2.01
CDC40-204ENST00000431461 ANKRD18AQ8IVF6 992 aa2.47□□□□□ -2.01
CDC40-204ENST00000431461 FAM71DQ8N9W8 422 aa2.47□□□□□ -2.01
CDC40-204ENST00000431461 SUN3Q8TAQ9 357 aa2.47□□□□□ -2.01
CDC40-204ENST00000431461 NOC3LQ8WTT2 800 aaKnown RBP2.47□□□□□ -2.01
CDC40-204ENST00000431461 POF1BQ8WVV4 589 aa2.47□□□□□ -2.01
CDC40-204ENST00000431461 CPT1BQ92523 772 aa2.47□□□□□ -2.01
CDC40-204ENST00000431461 HIC2Q96JB3 615 aa2.47□□□□□ -2.01
CDC40-204ENST00000431461 SCLT1Q96NL6 688 aa2.47□□□□□ -2.01
CDC40-204ENST00000431461 SNX18Q96RF0 628 aa2.47□□□□□ -2.01
CDC40-204ENST00000431461 PRPF18Q99633 342 aaKnown RBP2.47□□□□□ -2.01
CDC40-204ENST00000431461 GDF15Q99988 308 aa2.47□□□□□ -2.01
CDC40-204ENST00000431461 PAAF1Q9BRP4 392 aa2.47□□□□□ -2.01
CDC40-204ENST00000431461 CRB3Q9BUF7 120 aa2.47□□□□□ -2.01
CDC40-204ENST00000431461 MYLK2Q9H1R3 596 aa2.47□□□□□ -2.01
CDC40-204ENST00000431461 ERVK-5Q9HDB9 667 aa2.47□□□□□ -2.01
CDC40-204ENST00000431461 DUSP22Q9NRW4 184 aa2.47□□□□□ -2.01
CDC40-204ENST00000431461 FBXO28Q9NVF7 368 aa2.47□□□□□ -2.01
CDC40-204ENST00000431461 DACT1Q9NYF0 836 aa2.47□□□□□ -2.01
CDC40-204ENST00000431461 NDUFAF4Q9P032 175 aa2.47□□□□□ -2.01
CDC40-204ENST00000431461 MGAT4CQ9UBM8 478 aa2.47□□□□□ -2.01
CDC40-204ENST00000431461 ZMYND8Q9ULU4 1186 aaPredicted RBP2.47□□□□□ -2.01
CDC40-204ENST00000431461 SLC27A6Q9Y2P4 619 aa2.47□□□□□ -2.01
CDC40-204ENST00000431461 MRPS17Q9Y2R5 130 aaKnown RBP2.47□□□□□ -2.01
CDC40-204ENST00000431461 PCDHGB2Q9Y5G2 931 aa2.47□□□□□ -2.01
CDC40-204ENST00000431461 SNX14Q9Y5W7 946 aa2.47□□□□□ -2.01
CDC40-204ENST00000431461 PNMA6EA0A0J9YXQ4 647 aa2.46□□□□□ -2.02
CDC40-204ENST00000431461 GXYLT2A0PJZ3 443 aa2.46□□□□□ -2.02
CDC40-204ENST00000431461 POC1B-GALNT4F8VUJ3 575 aa2.46□□□□□ -2.02
CDC40-204ENST00000431461 FCHO1O14526 889 aa2.46□□□□□ -2.02
CDC40-204ENST00000431461 SEPT4O43236 478 aa2.46□□□□□ -2.02
CDC40-204ENST00000431461 GAS8-AS1O95177 125 aa2.46□□□□□ -2.02
CDC40-204ENST00000431461 ALPLP05186 524 aa2.46□□□□□ -2.02
CDC40-204ENST00000431461 TNNT1P13805 278 aa2.46□□□□□ -2.02
CDC40-204ENST00000431461 ATP5F1P24539 256 aaPredicted RBP2.46□□□□□ -2.02
CDC40-204ENST00000431461 SERPINF1P36955 418 aa2.46□□□□□ -2.02
CDC40-204ENST00000431461 HTR6P50406 440 aa2.46□□□□□ -2.02
CDC40-204ENST00000431461 CYP4F2P78329 520 aa2.46□□□□□ -2.02
CDC40-204ENST00000431461 CFHR3Q02985 330 aa2.46□□□□□ -2.02
CDC40-204ENST00000431461 CCDC15Q0P6D6 951 aa2.46□□□□□ -2.02
CDC40-204ENST00000431461 PRKG1Q13976 671 aa2.46□□□□□ -2.02
CDC40-204ENST00000431461 KCNJ12Q14500 433 aa2.46□□□□□ -2.02
CDC40-204ENST00000431461 PFKFB4Q16877 469 aa2.46□□□□□ -2.02
CDC40-204ENST00000431461 ADCK5Q3MIX3 580 aa2.46□□□□□ -2.02
CDC40-204ENST00000431461 TRIM60Q495X7 471 aa2.46□□□□□ -2.02
CDC40-204ENST00000431461 ARHGAP15Q53QZ3 475 aa2.46□□□□□ -2.02
CDC40-204ENST00000431461 ZNF569Q5MCW4 686 aa2.46□□□□□ -2.02
CDC40-204ENST00000431461 FAM83BQ5T0W9 1011 aa2.46□□□□□ -2.02
CDC40-204ENST00000431461 NAA35Q5VZE5 725 aa2.46□□□□□ -2.02
CDC40-204ENST00000431461 RRAGBQ5VZM2 374 aa2.46□□□□□ -2.02
CDC40-204ENST00000431461 TANGO2Q6ICL3 276 aa2.46□□□□□ -2.02
CDC40-204ENST00000431461 ANO7Q6IWH7 933 aa2.46□□□□□ -2.02
CDC40-204ENST00000431461 NFRKBQ6P4R8 1299 aa2.46□□□□□ -2.02
CDC40-204ENST00000431461 TMEM88Q6PEY1 159 aa2.46□□□□□ -2.02
CDC40-204ENST00000431461 SHC4Q6S5L8 630 aa2.46□□□□□ -2.02
CDC40-204ENST00000431461 KLHL17Q6TDP4 642 aa2.46□□□□□ -2.02
CDC40-204ENST00000431461 TRIM72Q6ZMU5 477 aa2.46□□□□□ -2.02
CDC40-204ENST00000431461 KRT27Q7Z3Y8 459 aa2.46□□□□□ -2.02
CDC40-204ENST00000431461 MAVSQ7Z434 540 aa2.46□□□□□ -2.02
CDC40-204ENST00000431461 P3H2Q8IVL5 708 aa2.46□□□□□ -2.02
CDC40-204ENST00000431461 CCDC117Q8IWD4 279 aaPredicted RBP2.46□□□□□ -2.02
CDC40-204ENST00000431461 SMAP1Q8IYB5 467 aaPredicted RBP2.46□□□□□ -2.02
CDC40-204ENST00000431461 C16orf71Q8IYS4 520 aaPredicted RBP2.46□□□□□ -2.02
CDC40-204ENST00000431461 CACNA2D3Q8IZS8 1091 aa2.46□□□□□ -2.02
CDC40-204ENST00000431461 GALNT15Q8N3T1 639 aa2.46□□□□□ -2.02
CDC40-204ENST00000431461 GALNT4Q8N4A0 578 aa2.46□□□□□ -2.02
CDC40-204ENST00000431461 GLIS1Q8NBF1 620 aa2.46□□□□□ -2.02
CDC40-204ENST00000431461 ADAMTS18Q8TE60 1221 aa2.46□□□□□ -2.02
CDC40-204ENST00000431461 TMEM171Q8WVE6 324 aa2.46□□□□□ -2.02
CDC40-204ENST00000431461 GLMPQ8WWB7 406 aa2.46□□□□□ -2.02
CDC40-204ENST00000431461 PPM1EQ8WY54 764 aa2.46□□□□□ -2.02
CDC40-204ENST00000431461 R3HDM4Q96D70 268 aa2.46□□□□□ -2.02
CDC40-204ENST00000431461 RITA1Q96K30 269 aa2.46□□□□□ -2.02
CDC40-204ENST00000431461 LYZL4Q96KX0 146 aa2.46□□□□□ -2.02
CDC40-204ENST00000431461 RTKNQ9BST9 563 aa2.46□□□□□ -2.02
CDC40-204ENST00000431461 KATNAL1Q9BW62 490 aa2.46□□□□□ -2.02
CDC40-204ENST00000431461 TMEM120AQ9BXJ8 343 aa2.46□□□□□ -2.02
CDC40-204ENST00000431461 SEPSECSQ9HD40 501 aaKnown RBP2.46□□□□□ -2.02
CDC40-204ENST00000431461 KCNK9Q9NPC2 374 aa2.46□□□□□ -2.02
CDC40-204ENST00000431461 LIN7CQ9NUP9 197 aaKnown RBP2.46□□□□□ -2.02
CDC40-204ENST00000431461 MRPS18AQ9NVS2 196 aaKnown RBP2.46□□□□□ -2.02
CDC40-204ENST00000431461 KLHL13Q9P2N7 655 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms