RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 IFNAR2P48551 515 aa11.42□□□□□ -0.58
CHD4-202ENST00000430771 KCNQ1P51787 676 aa11.42□□□□□ -0.58
CHD4-202ENST00000430771 SCAPQ12770 1279 aa11.42□□□□□ -0.58
CHD4-202ENST00000430771 ZC3H12AQ5D1E8 599 aaKnown RBP11.42□□□□□ -0.58
CHD4-202ENST00000430771 SCYL2Q6P3W7 929 aa11.42□□□□□ -0.58
CHD4-202ENST00000430771 Q6ZNB5 142 aa11.42□□□□□ -0.58
CHD4-202ENST00000430771 CCAR2Q8N163 923 aaKnown RBP11.42□□□□□ -0.58
CHD4-202ENST00000430771 TRIM58Q8NG06 486 aa11.42□□□□□ -0.58
CHD4-202ENST00000430771 FGF14Q92915 247 aa11.42□□□□□ -0.58
CHD4-202ENST00000430771 AZIN2Q96A70 460 aa11.42□□□□□ -0.58
CHD4-202ENST00000430771 KXD1Q9BQD3 176 aa11.42□□□□□ -0.58
CHD4-202ENST00000430771 ADAM33Q9BZ11 813 aa11.42□□□□□ -0.58
CHD4-202ENST00000430771 TKTL2Q9H0I9 626 aa11.42□□□□□ -0.58
CHD4-202ENST00000430771 GKN1Q9NS71 199 aa11.42□□□□□ -0.58
CHD4-202ENST00000430771 CALCOCO1Q9P1Z2 691 aa11.42□□□□□ -0.58
CHD4-202ENST00000430771 USP18Q9UMW8 372 aa11.42□□□□□ -0.58
CHD4-202ENST00000430771 CAPN6Q9Y6Q1 641 aa11.42□□□□□ -0.58
CHD4-202ENST00000430771 NUMBLQ9Y6R0 609 aa11.42□□□□□ -0.58
CHD4-202ENST00000430771 A0A0U1RQJ8 604 aa11.41□□□□□ -0.58
CHD4-202ENST00000430771 GRID2IPA4D2P6 1211 aa11.41□□□□□ -0.58
CHD4-202ENST00000430771 KCNU1A8MYU2 1149 aa11.41□□□□□ -0.58
CHD4-202ENST00000430771 LOC730098B7Z3J9 87 aa11.41□□□□□ -0.58
CHD4-202ENST00000430771 ANHXE9PGG2 379 aa11.41□□□□□ -0.58
CHD4-202ENST00000430771 KIF5CO60282 957 aa11.41□□□□□ -0.58
CHD4-202ENST00000430771 ACSL4O60488 711 aa11.41□□□□□ -0.58
CHD4-202ENST00000430771 NFATC1O95644 943 aa11.41□□□□□ -0.58
CHD4-202ENST00000430771 KRT7P08729 469 aa11.41□□□□□ -0.58
CHD4-202ENST00000430771 CHKAP35790 457 aa11.41□□□□□ -0.58
CHD4-202ENST00000430771 GJC1P36383 396 aa11.41□□□□□ -0.58
CHD4-202ENST00000430771 VIPR2P41587 438 aa11.41□□□□□ -0.58
CHD4-202ENST00000430771 ATXN1P54253 815 aaKnown RBP11.41□□□□□ -0.58
CHD4-202ENST00000430771 SLC25A11Q02978 314 aaKnown RBP11.41□□□□□ -0.58
CHD4-202ENST00000430771 ZP2Q05996 745 aa11.41□□□□□ -0.58
CHD4-202ENST00000430771 FCHO2Q0JRZ9 810 aa11.41□□□□□ -0.58
CHD4-202ENST00000430771 PDGFRLQ15198 375 aa11.41□□□□□ -0.58
CHD4-202ENST00000430771 SH3PXD2AQ5TCZ1 1133 aa11.41□□□□□ -0.58
CHD4-202ENST00000430771 TANGO2Q6ICL3 276 aa11.41□□□□□ -0.58
CHD4-202ENST00000430771 POTEHQ6S545 545 aa11.41□□□□□ -0.58
CHD4-202ENST00000430771 PARM1Q6UWI2 310 aa11.41□□□□□ -0.58
CHD4-202ENST00000430771 VITQ6UXI7 678 aa11.41□□□□□ -0.58
CHD4-202ENST00000430771 HTR3DQ70Z44 454 aa11.41□□□□□ -0.58
CHD4-202ENST00000430771 POLNQ7Z5Q5 900 aa11.41□□□□□ -0.58
CHD4-202ENST00000430771 SLFN11Q7Z7L1 901 aa11.41□□□□□ -0.58
CHD4-202ENST00000430771 CHSY1Q86X52 802 aa11.41□□□□□ -0.58
CHD4-202ENST00000430771 PSTKQ8IV42 348 aaKnown RBP11.41□□□□□ -0.58
CHD4-202ENST00000430771 DENND1CQ8IV53 801 aa11.41□□□□□ -0.58
CHD4-202ENST00000430771 MFSD6LQ8IWD5 586 aa11.41□□□□□ -0.58
CHD4-202ENST00000430771 CCDC185Q8N715 623 aa11.41□□□□□ -0.58
CHD4-202ENST00000430771 ADAMTS19Q8TE59 1207 aa11.41□□□□□ -0.58
CHD4-202ENST00000430771 OSCP1Q8WVF1 389 aa11.41□□□□□ -0.58
CHD4-202ENST00000430771 UBE2Q2Q8WVN8 375 aa11.41□□□□□ -0.58
CHD4-202ENST00000430771 TEKT4Q8WW24 435 aa11.41□□□□□ -0.58
CHD4-202ENST00000430771 ATRIPQ8WXE1 791 aa11.41□□□□□ -0.58
CHD4-202ENST00000430771 HAPLN3Q96S86 360 aa11.41□□□□□ -0.58
CHD4-202ENST00000430771 IRX2Q9BZI1 471 aaPredicted RBP11.41□□□□□ -0.58
CHD4-202ENST00000430771 KCND1Q9NSA2 647 aa11.41□□□□□ -0.58
CHD4-202ENST00000430771 TRMT1Q9NXH9 659 aaKnown RBP11.41□□□□□ -0.58
CHD4-202ENST00000430771 SALL4Q9UJQ4 1053 aa11.41□□□□□ -0.58
CHD4-202ENST00000430771 STOML2Q9UJZ1 356 aa11.41□□□□□ -0.58
CHD4-202ENST00000430771 AP4E1Q9UPM8 1137 aa11.41□□□□□ -0.58
CHD4-202ENST00000430771 ZKSCAN5Q9Y2L8 839 aa11.41□□□□□ -0.58
CHD4-202ENST00000430771 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.41□□□□□ -0.58
CHD4-202ENST00000430771 DUSP10Q9Y6W6 482 aa11.41□□□□□ -0.58
CHD4-202ENST00000430771 COL4A3Q01955 1670 aa11.4□□□□□ -0.58
CHD4-202ENST00000430771 F5H5T6 163 aa11.4□□□□□ -0.58
CHD4-202ENST00000430771 PAGE1O75459 146 aa11.4□□□□□ -0.58
CHD4-202ENST00000430771 PALMO75781 387 aa11.4□□□□□ -0.58
CHD4-202ENST00000430771 COMTP21964 271 aa11.4□□□□□ -0.58
CHD4-202ENST00000430771 ZNF135P52742 658 aaPredicted RBP11.4□□□□□ -0.58
CHD4-202ENST00000430771 ZXDBP98169 803 aa11.4□□□□□ -0.58
CHD4-202ENST00000430771 BOLA3Q53S33 107 aa11.4□□□□□ -0.58
CHD4-202ENST00000430771 ODF2Q5BJF6 829 aa11.4□□□□□ -0.58
CHD4-202ENST00000430771 ZFYVE27Q5T4F4 411 aa11.4□□□□□ -0.58
CHD4-202ENST00000430771 LRRC38Q5VT99 294 aa11.4□□□□□ -0.58
CHD4-202ENST00000430771 TTC39BQ5VTQ0 682 aaPredicted RBP11.4□□□□□ -0.58
CHD4-202ENST00000430771 PEX26Q7Z412 305 aa11.4□□□□□ -0.58
CHD4-202ENST00000430771 BBS7Q8IWZ6 715 aa11.4□□□□□ -0.58
CHD4-202ENST00000430771 REXO1L1PQ8IX06 675 aa11.4□□□□□ -0.58
CHD4-202ENST00000430771 RHOT1Q8IXI2 618 aa11.4□□□□□ -0.58
CHD4-202ENST00000430771 CPXM2Q8N436 756 aa11.4□□□□□ -0.58
CHD4-202ENST00000430771 LRRC57Q8N9N7 239 aa11.4□□□□□ -0.58
CHD4-202ENST00000430771 RIN3Q8TB24 985 aa11.4□□□□□ -0.58
CHD4-202ENST00000430771 KIAA1524Q8TCG1 905 aa11.4□□□□□ -0.58
CHD4-202ENST00000430771 ATP2A3Q93084 1043 aa11.4□□□□□ -0.58
CHD4-202ENST00000430771 RSPRY1Q96DX4 576 aa11.4□□□□□ -0.58
CHD4-202ENST00000430771 ASB2Q96Q27 587 aa11.4□□□□□ -0.58
CHD4-202ENST00000430771 EPAS1Q99814 870 aa11.4□□□□□ -0.58
CHD4-202ENST00000430771 SNRNP25Q9BV90 132 aaKnown RBP11.4□□□□□ -0.58
CHD4-202ENST00000430771 TRMT61BQ9BVS5 477 aaKnown RBP11.4□□□□□ -0.58
CHD4-202ENST00000430771 DUS2Q9NX74 493 aaKnown RBP11.4□□□□□ -0.58
CHD4-202ENST00000430771 PCSK1NQ9UHG2 260 aa11.4□□□□□ -0.58
CHD4-202ENST00000430771 AMFRQ9UKV5 643 aa11.4□□□□□ -0.58
CHD4-202ENST00000430771 AGO1Q9UL18 857 aaKnown RBP11.4□□□□□ -0.58
CHD4-202ENST00000430771 FZD10Q9ULW2 581 aa11.4□□□□□ -0.58
CHD4-202ENST00000430771 CCDC66A2RUB6 948 aa11.39□□□□□ -0.59
CHD4-202ENST00000430771 MIF4GDA9UHW6 222 aaKnown RBP11.39□□□□□ -0.59
CHD4-202ENST00000430771 CHADO15335 359 aa11.39□□□□□ -0.59
CHD4-202ENST00000430771 GREM1O60565 184 aa11.39□□□□□ -0.59
CHD4-202ENST00000430771 ADH1CP00326 375 aa11.39□□□□□ -0.59
CHD4-202ENST00000430771 KLKB1P03952 638 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms