RNA–Protein interactions for RNA: ENST00000430705.5

PTPRA-206, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 733 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-206ENST00000430705 SH3PXD2AQ5TCZ1 1133 aa16.99■□□□□ 0.31
PTPRA-206ENST00000430705 SDE2Q6IQ49 451 aa16.99■□□□□ 0.31
PTPRA-206ENST00000430705 SLC36A4Q6YBV0 504 aa16.99■□□□□ 0.31
PTPRA-206ENST00000430705 SIX6OS1Q8N1H7 587 aa16.99■□□□□ 0.31
PTPRA-206ENST00000430705 WFDC5Q8TCV5 224 aa16.99■□□□□ 0.31
PTPRA-206ENST00000430705 HSPA12BQ96MM6 686 aa16.99■□□□□ 0.31
PTPRA-206ENST00000430705 IPO9Q96P70 1041 aaKnown RBP16.99■□□□□ 0.31
PTPRA-206ENST00000430705 CNGB3Q9NQW8 809 aa16.99■□□□□ 0.31
PTPRA-206ENST00000430705 OLA1Q9NTK5 396 aaKnown RBP16.99■□□□□ 0.31
PTPRA-206ENST00000430705 USP36Q9P275 1121 aaKnown RBP16.99■□□□□ 0.31
PTPRA-206ENST00000430705 HOOK1Q9UJC3 728 aaKnown RBP16.99■□□□□ 0.31
PTPRA-206ENST00000430705 KIAA1257Q9ULG3 409 aa16.99■□□□□ 0.31
PTPRA-206ENST00000430705 ASCC3Q8N3C0 2202 aaKnown RBP16.98■□□□□ 0.31
PTPRA-206ENST00000430705 P4HA2O15460 535 aa16.98■□□□□ 0.31
PTPRA-206ENST00000430705 ZNF217O75362 1048 aa16.98■□□□□ 0.31
PTPRA-206ENST00000430705 KRT37O76014 449 aa16.98■□□□□ 0.31
PTPRA-206ENST00000430705 FYNP06241 537 aa16.98■□□□□ 0.31
PTPRA-206ENST00000430705 HLA-FP30511 346 aa16.98■□□□□ 0.31
PTPRA-206ENST00000430705 HOXD12P35452 270 aa16.98■□□□□ 0.31
PTPRA-206ENST00000430705 PI4KAP42356 2102 aa16.98■□□□□ 0.31
PTPRA-206ENST00000430705 MAPK8P45983 427 aa16.98■□□□□ 0.31
PTPRA-206ENST00000430705 MARSP56192 900 aaKnown RBP16.98■□□□□ 0.31
PTPRA-206ENST00000430705 CNGA2Q16280 664 aa16.98■□□□□ 0.31
PTPRA-206ENST00000430705 DAB2IPQ5VWQ8 1189 aa16.98■□□□□ 0.31
PTPRA-206ENST00000430705 KIAA1324Q6UXG2 1013 aaKnown RBP16.98■□□□□ 0.31
PTPRA-206ENST00000430705 OR2I1PQ8NGU4 316 aa16.98■□□□□ 0.31
PTPRA-206ENST00000430705 DDI1Q8WTU0 396 aa16.98■□□□□ 0.31
PTPRA-206ENST00000430705 MYEOVQ96EZ4 313 aa16.98■□□□□ 0.31
PTPRA-206ENST00000430705 MED15Q96RN5 788 aa16.98■□□□□ 0.31
PTPRA-206ENST00000430705 ABCC13Q9NSE7 274 aa16.98■□□□□ 0.31
PTPRA-206ENST00000430705 ELOVL2Q9NXB9 296 aa16.98■□□□□ 0.31
PTPRA-206ENST00000430705 ANGPTL2Q9UKU9 493 aa16.98■□□□□ 0.31
PTPRA-206ENST00000430705 CACNA1BQ00975 2339 aa16.97■□□□□ 0.31
PTPRA-206ENST00000430705 TOP3BO95985 862 aaKnown RBP16.97■□□□□ 0.31
PTPRA-206ENST00000430705 NCAM1P13591 858 aa16.97■□□□□ 0.31
PTPRA-206ENST00000430705 CSRP1P21291 193 aaKnown RBP16.97■□□□□ 0.31
PTPRA-206ENST00000430705 SLC6A4P31645 630 aa16.97■□□□□ 0.31
PTPRA-206ENST00000430705 PPP1R2P41236 205 aa16.97■□□□□ 0.31
PTPRA-206ENST00000430705 RPL34P49207 117 aaKnown RBP16.97■□□□□ 0.31
PTPRA-206ENST00000430705 GCNT1Q02742 428 aa16.97■□□□□ 0.31
PTPRA-206ENST00000430705 ZNF252P-AS1Q0IIN9 211 aa16.97■□□□□ 0.31
PTPRA-206ENST00000430705 KCNH2Q12809 1159 aa16.97■□□□□ 0.31
PTPRA-206ENST00000430705 LMAN2Q12907 356 aa16.97■□□□□ 0.31
PTPRA-206ENST00000430705 UAP1L1Q3KQV9 507 aa16.97■□□□□ 0.31
PTPRA-206ENST00000430705 FAM133BQ5BKY9 247 aaKnown RBP16.97■□□□□ 0.31
PTPRA-206ENST00000430705 NADSYN1Q6IA69 706 aa16.97■□□□□ 0.31
PTPRA-206ENST00000430705 KIAA0907Q7Z7F0 614 aaPredicted RBP16.97■□□□□ 0.31
PTPRA-206ENST00000430705 TRIML1Q8N9V2 468 aa16.97■□□□□ 0.31
PTPRA-206ENST00000430705 EHBP1Q8NDI1 1231 aa16.97■□□□□ 0.31
PTPRA-206ENST00000430705 DEFB124Q8NES8 71 aa16.97■□□□□ 0.31
PTPRA-206ENST00000430705 ZNF419Q96HQ0 510 aaPredicted RBP16.97■□□□□ 0.31
PTPRA-206ENST00000430705 PRICKLE1Q96MT3 831 aaPredicted RBP16.97■□□□□ 0.31
PTPRA-206ENST00000430705 NUSAP1Q9BXS6 441 aaKnown RBP16.97■□□□□ 0.31
PTPRA-206ENST00000430705 SLC2A11Q9BYW1 496 aa16.97■□□□□ 0.31
PTPRA-206ENST00000430705 INTS2Q9H0H0 1204 aaKnown RBP16.97■□□□□ 0.31
PTPRA-206ENST00000430705 CNTN6Q9UQ52 1028 aa16.97■□□□□ 0.31
PTPRA-206ENST00000430705 GOLGA6L7A0A1B0GV03 622 aa16.96■□□□□ 0.31
PTPRA-206ENST00000430705 LATS1O95835 1130 aa16.96■□□□□ 0.31
PTPRA-206ENST00000430705 CYBBP04839 570 aa16.96■□□□□ 0.31
PTPRA-206ENST00000430705 CFIP05156 583 aa16.96■□□□□ 0.31
PTPRA-206ENST00000430705 SERPINF2P08697 491 aa16.96■□□□□ 0.31
PTPRA-206ENST00000430705 HLA-EP13747 358 aa16.96■□□□□ 0.31
PTPRA-206ENST00000430705 HARS2P49590 506 aaKnown RBP16.96■□□□□ 0.31
PTPRA-206ENST00000430705 PAK1Q13153 545 aa16.96■□□□□ 0.31
PTPRA-206ENST00000430705 EIF4HQ15056 248 aaKnown RBP16.96■□□□□ 0.31
PTPRA-206ENST00000430705 PTPRNQ16849 979 aa16.96■□□□□ 0.31
PTPRA-206ENST00000430705 DUOXA1Q1HG43 343 aa16.96■□□□□ 0.31
PTPRA-206ENST00000430705 MPPE1Q53F39 396 aa16.96■□□□□ 0.31
PTPRA-206ENST00000430705 PIP4P1Q86T03 277 aa16.96■□□□□ 0.31
PTPRA-206ENST00000430705 METTL3Q86U44 580 aaKnown RBP16.96■□□□□ 0.31
PTPRA-206ENST00000430705 ADIPOR2Q86V24 386 aa16.96■□□□□ 0.31
PTPRA-206ENST00000430705 CACUL1Q86Y37 369 aa16.96■□□□□ 0.31
PTPRA-206ENST00000430705 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.96■□□□□ 0.31
PTPRA-206ENST00000430705 RNF139Q8WU17 664 aa16.96■□□□□ 0.31
PTPRA-206ENST00000430705 IRGQQ8WZA9 623 aa16.96■□□□□ 0.31
PTPRA-206ENST00000430705 LMLNQ96KR4 655 aa16.96■□□□□ 0.31
PTPRA-206ENST00000430705 CIPCQ9C0C6 399 aa16.96■□□□□ 0.31
PTPRA-206ENST00000430705 PRDM16Q9HAZ2 1276 aa16.96■□□□□ 0.31
PTPRA-206ENST00000430705 WSB2Q9NYS7 404 aaPredicted RBP16.96■□□□□ 0.31
PTPRA-206ENST00000430705 CYTH4Q9UIA0 394 aa16.96■□□□□ 0.31
PTPRA-206ENST00000430705 SLC6A14Q9UN76 642 aa16.96■□□□□ 0.31
PTPRA-206ENST00000430705 GON4LQ3T8J9 2241 aa16.96■□□□□ 0.3
PTPRA-206ENST00000430705 NYNRINQ9P2P1 1898 aaKnown RBP16.95■□□□□ 0.3
PTPRA-206ENST00000430705 BICDL2A1A5D9 508 aa16.95■□□□□ 0.3
PTPRA-206ENST00000430705 NPC1O15118 1278 aa16.95■□□□□ 0.3
PTPRA-206ENST00000430705 AFPP02771 609 aaKnown RBP16.95■□□□□ 0.3
PTPRA-206ENST00000430705 LTFP02788 710 aa16.95■□□□□ 0.3
PTPRA-206ENST00000430705 CD6P30203 668 aa16.95■□□□□ 0.3
PTPRA-206ENST00000430705 DPP6P42658 865 aa16.95■□□□□ 0.3
PTPRA-206ENST00000430705 GPD2P43304 727 aa16.95■□□□□ 0.3
PTPRA-206ENST00000430705 APBA1Q02410 837 aa16.95■□□□□ 0.3
PTPRA-206ENST00000430705 SEMA3BQ13214 749 aa16.95■□□□□ 0.3
PTPRA-206ENST00000430705 STARD3Q14849 445 aa16.95■□□□□ 0.3
PTPRA-206ENST00000430705 ADGRF1Q5T601 910 aa16.95■□□□□ 0.3
PTPRA-206ENST00000430705 DENND1BQ6P3S1 775 aa16.95■□□□□ 0.3
PTPRA-206ENST00000430705 RFWD3Q6PCD5 774 aa16.95■□□□□ 0.3
PTPRA-206ENST00000430705 ZNF366Q8N895 744 aa16.95■□□□□ 0.3
PTPRA-206ENST00000430705 CYB5D2Q8WUJ1 264 aa16.95■□□□□ 0.3
PTPRA-206ENST00000430705 TOE1Q96GM8 510 aaKnown RBP16.95■□□□□ 0.3
PTPRA-206ENST00000430705 FCRL2Q96LA5 508 aaPredicted RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms