RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 NOS1APO75052 506 aaPredicted RBP16.84■□□□□ 0.29
RIF1-204ENST00000430328 HSD3B1P14060 373 aa16.84■□□□□ 0.29
RIF1-204ENST00000430328 KCNA10Q16322 511 aa16.84■□□□□ 0.29
RIF1-204ENST00000430328 CBWD2Q8IUF1 395 aa16.84■□□□□ 0.29
RIF1-204ENST00000430328 PCF11O94913 1555 aaKnown RBP16.84■□□□□ 0.29
RIF1-204ENST00000430328 SLC16A3O15427 465 aaKnown RBP16.84■□□□□ 0.29
RIF1-204ENST00000430328 CD4P01730 458 aa16.84■□□□□ 0.29
RIF1-204ENST00000430328 GPD1P21695 349 aa16.84■□□□□ 0.29
RIF1-204ENST00000430328 ATP2C1P98194 919 aaPredicted RBP16.84■□□□□ 0.29
RIF1-204ENST00000430328 FASTKQ14296 549 aaKnown RBP16.84■□□□□ 0.29
RIF1-204ENST00000430328 PTGES3Q15185 160 aaKnown RBP16.84■□□□□ 0.29
RIF1-204ENST00000430328 FAM171BQ6P995 826 aa16.84■□□□□ 0.29
RIF1-204ENST00000430328 GIPC3Q8TF64 312 aa16.84■□□□□ 0.29
RIF1-204ENST00000430328 STARD8Q92502 1023 aa16.84■□□□□ 0.29
RIF1-204ENST00000430328 APBB2Q92870 758 aa16.84■□□□□ 0.29
RIF1-204ENST00000430328 DNAJC1Q96KC8 554 aaKnown RBP16.84■□□□□ 0.29
RIF1-204ENST00000430328 C7orf25Q9BPX7 421 aa16.84■□□□□ 0.29
RIF1-204ENST00000430328 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.84■□□□□ 0.29
RIF1-204ENST00000430328 MAP10Q9P2G4 905 aa16.84■□□□□ 0.29
RIF1-204ENST00000430328 GNPTGQ9UJJ9 305 aa16.84■□□□□ 0.29
RIF1-204ENST00000430328 AP3M1Q9Y2T2 418 aa16.84■□□□□ 0.29
RIF1-204ENST00000430328 ERVV-2B6SEH9 535 aa16.84■□□□□ 0.29
RIF1-204ENST00000430328 IFRD1O00458 451 aaPredicted RBP16.84■□□□□ 0.29
RIF1-204ENST00000430328 USP17L8P0C7I0 530 aa16.84■□□□□ 0.29
RIF1-204ENST00000430328 BHLHB9Q6PI77 547 aa16.84■□□□□ 0.29
RIF1-204ENST00000430328 UTS2BQ765I0 119 aa16.84■□□□□ 0.29
RIF1-204ENST00000430328 AIF1LQ9BQI0 150 aa16.84■□□□□ 0.29
RIF1-204ENST00000430328 EMILIN2Q9BXX0 1053 aa16.84■□□□□ 0.29
RIF1-204ENST00000430328 PRH1P02810 166 aa16.84■□□□□ 0.29
RIF1-204ENST00000430328 TXNRD1Q16881 649 aa16.84■□□□□ 0.29
RIF1-204ENST00000430328 PRR5LQ6MZQ0 368 aa16.84■□□□□ 0.29
RIF1-204ENST00000430328 CCDC54Q8NEL0 328 aa16.84■□□□□ 0.29
RIF1-204ENST00000430328 LENG1Q96BZ8 264 aaPredicted RBP16.84■□□□□ 0.29
RIF1-204ENST00000430328 EIF2AK1Q9BQI3 630 aaKnown RBP16.84■□□□□ 0.29
RIF1-204ENST00000430328 NT5C1AQ9BXI3 368 aa16.84■□□□□ 0.29
RIF1-204ENST00000430328 FAM49BQ9NUQ9 324 aa16.84■□□□□ 0.29
RIF1-204ENST00000430328 LOC110117498-PIK3R3F6TDL0 507 aa16.84■□□□□ 0.29
RIF1-204ENST00000430328 UBOX5O94941 541 aa16.84■□□□□ 0.29
RIF1-204ENST00000430328 STRA8Q7Z7C7 330 aa16.84■□□□□ 0.29
RIF1-204ENST00000430328 HIPK1Q86Z02 1210 aa16.84■□□□□ 0.29
RIF1-204ENST00000430328 CHP1Q99653 195 aa16.84■□□□□ 0.29
RIF1-204ENST00000430328 STK36Q9NRP7 1315 aa16.84■□□□□ 0.29
RIF1-204ENST00000430328 KIAA0232Q92628 1395 aa16.84■□□□□ 0.29
RIF1-204ENST00000430328 PDGFRBP09619 1106 aa16.84■□□□□ 0.29
RIF1-204ENST00000430328 CCR4P51679 360 aa16.84■□□□□ 0.29
RIF1-204ENST00000430328 SAMD4BQ5PRF9 694 aaKnown RBP16.84■□□□□ 0.29
RIF1-204ENST00000430328 PPP1R18Q6NYC8 613 aa16.84■□□□□ 0.29
RIF1-204ENST00000430328 PRCCQ92733 491 aaPredicted RBP16.84■□□□□ 0.29
RIF1-204ENST00000430328 GREM2Q9H772 168 aa16.84■□□□□ 0.29
RIF1-204ENST00000430328 COILP38432 576 aaPredicted RBP16.83■□□□□ 0.29
RIF1-204ENST00000430328 USP46P62068 366 aa16.83■□□□□ 0.29
RIF1-204ENST00000430328 IL18R1Q13478 541 aa16.83■□□□□ 0.29
RIF1-204ENST00000430328 SPAG16Q8N0X2 631 aa16.83■□□□□ 0.29
RIF1-204ENST00000430328 KLHL23Q8NBE8 558 aa16.83■□□□□ 0.29
RIF1-204ENST00000430328 ZHX1-C8orf76Q96EF9 292 aa16.83■□□□□ 0.29
RIF1-204ENST00000430328 WHRNQ9P202 907 aa16.83■□□□□ 0.29
RIF1-204ENST00000430328 COPZ1P61923 177 aa16.83■□□□□ 0.29
RIF1-204ENST00000430328 OLR1P78380 273 aa16.83■□□□□ 0.29
RIF1-204ENST00000430328 HPS3Q969F9 1004 aa16.83■□□□□ 0.29
RIF1-204ENST00000430328 ITCHQ96J02 903 aa16.83■□□□□ 0.29
RIF1-204ENST00000430328 AIFM3Q96NN9 605 aa16.83■□□□□ 0.29
RIF1-204ENST00000430328 SLITRK1Q96PX8 696 aa16.83■□□□□ 0.29
RIF1-204ENST00000430328 GANQ9H2C0 597 aa16.83■□□□□ 0.29
RIF1-204ENST00000430328 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.83■□□□□ 0.29
RIF1-204ENST00000430328 DRG1Q9Y295 367 aaKnown RBP16.83■□□□□ 0.29
RIF1-204ENST00000430328 TBC1D30Q9Y2I9 924 aa16.83■□□□□ 0.29
RIF1-204ENST00000430328 ASS1P00966 412 aaKnown RBP16.83■□□□□ 0.29
RIF1-204ENST00000430328 GPR15P49685 360 aa16.83■□□□□ 0.29
RIF1-204ENST00000430328 ACOX2Q99424 681 aa16.83■□□□□ 0.29
RIF1-204ENST00000430328 SEPT5Q99719 369 aaPredicted RBP16.83■□□□□ 0.29
RIF1-204ENST00000430328 AGAP1Q9UPQ3 857 aa16.83■□□□□ 0.29
RIF1-204ENST00000430328 INVSQ9Y283 1065 aa16.83■□□□□ 0.29
RIF1-204ENST00000430328 SPEF1Q9Y4P9 236 aa16.83■□□□□ 0.29
RIF1-204ENST00000430328 KRT33AO76009 404 aa16.83■□□□□ 0.28
RIF1-204ENST00000430328 RECQL5O94762 991 aaPredicted RBP16.83■□□□□ 0.28
RIF1-204ENST00000430328 EPN2O95208 641 aa16.83■□□□□ 0.28
RIF1-204ENST00000430328 GEMP55040 296 aa16.83■□□□□ 0.28
RIF1-204ENST00000430328 MYBPC1Q00872 1141 aa16.83■□□□□ 0.28
RIF1-204ENST00000430328 MTF1Q14872 753 aa16.83■□□□□ 0.28
RIF1-204ENST00000430328 PDCD4Q53EL6 469 aaKnown RBP16.83■□□□□ 0.28
RIF1-204ENST00000430328 LMBRD2Q68DH5 695 aaPredicted RBP16.83■□□□□ 0.28
RIF1-204ENST00000430328 IRGCQ6NXR0 463 aa16.83■□□□□ 0.28
RIF1-204ENST00000430328 GRPEL2Q8TAA5 225 aa16.83■□□□□ 0.28
RIF1-204ENST00000430328 TTYH1Q9H313 450 aaPredicted RBP16.83■□□□□ 0.28
RIF1-204ENST00000430328 RAPGEFL1Q9UHV5 662 aa16.83■□□□□ 0.28
RIF1-204ENST00000430328 VPS51Q9UID3 782 aa16.83■□□□□ 0.28
RIF1-204ENST00000430328 CARD8Q9Y2G2 431 aa16.83■□□□□ 0.28
RIF1-204ENST00000430328 TRAPPC8Q9Y2L5 1435 aa16.83■□□□□ 0.28
RIF1-204ENST00000430328 RGSL1A5PLK6 1076 aa16.83■□□□□ 0.28
RIF1-204ENST00000430328 KCNJ6P48051 423 aa16.83■□□□□ 0.28
RIF1-204ENST00000430328 SLC1A6P48664 564 aa16.83■□□□□ 0.28
RIF1-204ENST00000430328 XIAPP98170 497 aa16.83■□□□□ 0.28
RIF1-204ENST00000430328 PIN4Q9Y237 131 aaKnown RBP16.83■□□□□ 0.28
RIF1-204ENST00000430328 C15orf41Q9Y2V0 281 aa16.83■□□□□ 0.28
RIF1-204ENST00000430328 PBLDP30039 288 aaPredicted RBP16.83■□□□□ 0.28
RIF1-204ENST00000430328 IDH2P48735 452 aaKnown RBP16.83■□□□□ 0.28
RIF1-204ENST00000430328 NRF1Q16656 503 aa16.83■□□□□ 0.28
RIF1-204ENST00000430328 AGMOQ6ZNB7 445 aa16.83■□□□□ 0.28
RIF1-204ENST00000430328 WDCPQ9H6R7 721 aa16.83■□□□□ 0.28
RIF1-204ENST00000430328 RPH3AQ9Y2J0 694 aaPredicted RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms