RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 DDI1Q8WTU0 396 aa17.85■□□□□ 0.45
CPSF4-203ENST00000430038 PLD4Q96BZ4 506 aa17.85■□□□□ 0.45
CPSF4-203ENST00000430038 ACP6Q9NPH0 428 aa17.85■□□□□ 0.45
CPSF4-203ENST00000430038 KIAA1257Q9ULG3 409 aa17.85■□□□□ 0.45
CPSF4-203ENST00000430038 STRIP2Q9ULQ0 834 aa17.85■□□□□ 0.45
CPSF4-203ENST00000430038 WASF3Q9UPY6 502 aa17.85■□□□□ 0.45
CPSF4-203ENST00000430038 WDFY3Q8IZQ1 3526 aa17.85■□□□□ 0.45
CPSF4-203ENST00000430038 IGLV3-27P01718 113 aa17.84■□□□□ 0.45
CPSF4-203ENST00000430038 SETSIPP0DME0 302 aa17.84■□□□□ 0.45
CPSF4-203ENST00000430038 MAOBP27338 520 aa17.84■□□□□ 0.45
CPSF4-203ENST00000430038 SLC6A4P31645 630 aa17.84■□□□□ 0.45
CPSF4-203ENST00000430038 MAPK8P45983 427 aa17.84■□□□□ 0.45
CPSF4-203ENST00000430038 NOVA1P51513 510 aaKnown RBP17.84■□□□□ 0.45
CPSF4-203ENST00000430038 COPAP53621 1224 aa17.84■□□□□ 0.45
CPSF4-203ENST00000430038 SLC8A3P57103 927 aa17.84■□□□□ 0.45
CPSF4-203ENST00000430038 YWHAEP62258 255 aaKnown RBP17.84■□□□□ 0.45
CPSF4-203ENST00000430038 UAP1L1Q3KQV9 507 aa17.84■□□□□ 0.45
CPSF4-203ENST00000430038 RFWD3Q6PCD5 774 aa17.84■□□□□ 0.45
CPSF4-203ENST00000430038 ZNF419Q96HQ0 510 aaPredicted RBP17.84■□□□□ 0.45
CPSF4-203ENST00000430038 IPO9Q96P70 1041 aaKnown RBP17.84■□□□□ 0.45
CPSF4-203ENST00000430038 SRRTQ9BXP5 876 aaKnown RBP17.84■□□□□ 0.45
CPSF4-203ENST00000430038 CAPN10Q9HC96 672 aa17.84■□□□□ 0.45
CPSF4-203ENST00000430038 CNGB3Q9NQW8 809 aa17.84■□□□□ 0.45
CPSF4-203ENST00000430038 ABCC13Q9NSE7 274 aa17.84■□□□□ 0.45
CPSF4-203ENST00000430038 CYTH4Q9UIA0 394 aa17.84■□□□□ 0.45
CPSF4-203ENST00000430038 HBS1LQ9Y450 684 aaKnown RBP17.84■□□□□ 0.45
CPSF4-203ENST00000430038 ZFHX4Q86UP3 3567 aa17.83■□□□□ 0.45
CPSF4-203ENST00000430038 M0QYV0 167 aa17.83■□□□□ 0.44
CPSF4-203ENST00000430038 AP5Z1O43299 807 aa17.83■□□□□ 0.44
CPSF4-203ENST00000430038 HLA-EP13747 358 aa17.83■□□□□ 0.44
CPSF4-203ENST00000430038 RPL34P49207 117 aaKnown RBP17.83■□□□□ 0.44
CPSF4-203ENST00000430038 MARSP56192 900 aaKnown RBP17.83■□□□□ 0.44
CPSF4-203ENST00000430038 STIM1Q13586 685 aa17.83■□□□□ 0.44
CPSF4-203ENST00000430038 BYSLQ13895 437 aaKnown RBP17.83■□□□□ 0.44
CPSF4-203ENST00000430038 FAM133BQ5BKY9 247 aaKnown RBP17.83■□□□□ 0.44
CPSF4-203ENST00000430038 NADSYN1Q6IA69 706 aa17.83■□□□□ 0.44
CPSF4-203ENST00000430038 MSANTD2Q6P1R3 559 aa17.83■□□□□ 0.44
CPSF4-203ENST00000430038 GJB7Q6PEY0 223 aa17.83■□□□□ 0.44
CPSF4-203ENST00000430038 FOXR2Q6PJQ5 311 aa17.83■□□□□ 0.44
CPSF4-203ENST00000430038 KIAA1324Q6UXG2 1013 aaKnown RBP17.83■□□□□ 0.44
CPSF4-203ENST00000430038 KIAA0907Q7Z7F0 614 aaPredicted RBP17.83■□□□□ 0.44
CPSF4-203ENST00000430038 ADIPOR2Q86V24 386 aa17.83■□□□□ 0.44
CPSF4-203ENST00000430038 SIX6OS1Q8N1H7 587 aa17.83■□□□□ 0.44
CPSF4-203ENST00000430038 ZNF366Q8N895 744 aa17.83■□□□□ 0.44
CPSF4-203ENST00000430038 TRIML1Q8N9V2 468 aa17.83■□□□□ 0.44
CPSF4-203ENST00000430038 RNF139Q8WU17 664 aa17.83■□□□□ 0.44
CPSF4-203ENST00000430038 HSPA12BQ96MM6 686 aa17.83■□□□□ 0.44
CPSF4-203ENST00000430038 GTPBP4Q9BZE4 634 aaKnown RBP17.83■□□□□ 0.44
CPSF4-203ENST00000430038 ITM2CQ9NQX7 267 aa17.83■□□□□ 0.44
CPSF4-203ENST00000430038 OLA1Q9NTK5 396 aaKnown RBP17.83■□□□□ 0.44
CPSF4-203ENST00000430038 HOOK1Q9UJC3 728 aaKnown RBP17.83■□□□□ 0.44
CPSF4-203ENST00000430038 CNTN6Q9UQ52 1028 aa17.83■□□□□ 0.44
CPSF4-203ENST00000430038 P4HA2O15460 535 aa17.82■□□□□ 0.44
CPSF4-203ENST00000430038 ZNF217O75362 1048 aa17.82■□□□□ 0.44
CPSF4-203ENST00000430038 NCAM1P13591 858 aa17.82■□□□□ 0.44
CPSF4-203ENST00000430038 SPINK2P20155 84 aa17.82■□□□□ 0.44
CPSF4-203ENST00000430038 GPD2P43304 727 aa17.82■□□□□ 0.44
CPSF4-203ENST00000430038 PTPRNQ16849 979 aa17.82■□□□□ 0.44
CPSF4-203ENST00000430038 ADGRF1Q5T601 910 aa17.82■□□□□ 0.44
CPSF4-203ENST00000430038 DAB2IPQ5VWQ8 1189 aa17.82■□□□□ 0.44
CPSF4-203ENST00000430038 DENND1BQ6P3S1 775 aa17.82■□□□□ 0.44
CPSF4-203ENST00000430038 SLC36A4Q6YBV0 504 aa17.82■□□□□ 0.44
CPSF4-203ENST00000430038 ANKS1BQ7Z6G8 1248 aa17.82■□□□□ 0.44
CPSF4-203ENST00000430038 IRF2BP1Q8IU81 584 aa17.82■□□□□ 0.44
CPSF4-203ENST00000430038 SCUBE3Q8IX30 993 aa17.82■□□□□ 0.44
CPSF4-203ENST00000430038 DEFB124Q8NES8 71 aa17.82■□□□□ 0.44
CPSF4-203ENST00000430038 CYB5D2Q8WUJ1 264 aa17.82■□□□□ 0.44
CPSF4-203ENST00000430038 LMLNQ96KR4 655 aa17.82■□□□□ 0.44
CPSF4-203ENST00000430038 MIS12Q9H081 205 aa17.82■□□□□ 0.44
CPSF4-203ENST00000430038 INTS2Q9H0H0 1204 aaKnown RBP17.82■□□□□ 0.44
CPSF4-203ENST00000430038 PRDM16Q9HAZ2 1276 aa17.82■□□□□ 0.44
CPSF4-203ENST00000430038 WSB2Q9NYS7 404 aaPredicted RBP17.82■□□□□ 0.44
CPSF4-203ENST00000430038 USP36Q9P275 1121 aaKnown RBP17.82■□□□□ 0.44
CPSF4-203ENST00000430038 TJP2Q9UDY2 1190 aa17.82■□□□□ 0.44
CPSF4-203ENST00000430038 LTFP02788 710 aa17.81■□□□□ 0.44
CPSF4-203ENST00000430038 CYBBP04839 570 aa17.81■□□□□ 0.44
CPSF4-203ENST00000430038 CFIP05156 583 aa17.81■□□□□ 0.44
CPSF4-203ENST00000430038 SERPINF2P08697 491 aa17.81■□□□□ 0.44
CPSF4-203ENST00000430038 CD70P32970 193 aa17.81■□□□□ 0.44
CPSF4-203ENST00000430038 HARS2P49590 506 aaKnown RBP17.81■□□□□ 0.44
CPSF4-203ENST00000430038 SHC2P98077 582 aa17.81■□□□□ 0.44
CPSF4-203ENST00000430038 GCNT1Q02742 428 aa17.81■□□□□ 0.44
CPSF4-203ENST00000430038 PAK1Q13153 545 aa17.81■□□□□ 0.44
CPSF4-203ENST00000430038 CAMK4Q16566 473 aa17.81■□□□□ 0.44
CPSF4-203ENST00000430038 DUOXA1Q1HG43 343 aa17.81■□□□□ 0.44
CPSF4-203ENST00000430038 MPPE1Q53F39 396 aa17.81■□□□□ 0.44
CPSF4-203ENST00000430038 SYPL2Q5VXT5 272 aa17.81■□□□□ 0.44
CPSF4-203ENST00000430038 METTL3Q86U44 580 aaKnown RBP17.81■□□□□ 0.44
CPSF4-203ENST00000430038 CACUL1Q86Y37 369 aa17.81■□□□□ 0.44
CPSF4-203ENST00000430038 TMPRSS6Q8IU80 811 aa17.81■□□□□ 0.44
CPSF4-203ENST00000430038 TMA16Q96EY4 203 aaKnown RBP17.81■□□□□ 0.44
CPSF4-203ENST00000430038 TOE1Q96GM8 510 aaKnown RBP17.81■□□□□ 0.44
CPSF4-203ENST00000430038 NUSAP1Q9BXS6 441 aaKnown RBP17.81■□□□□ 0.44
CPSF4-203ENST00000430038 SLC2A11Q9BYW1 496 aa17.81■□□□□ 0.44
CPSF4-203ENST00000430038 CIPCQ9C0C6 399 aa17.81■□□□□ 0.44
CPSF4-203ENST00000430038 MTG2Q9H4K7 406 aa17.81■□□□□ 0.44
CPSF4-203ENST00000430038 ABCB8Q9NUT2 735 aa17.81■□□□□ 0.44
CPSF4-203ENST00000430038 ANGPTL2Q9UKU9 493 aa17.81■□□□□ 0.44
CPSF4-203ENST00000430038 SLC6A14Q9UN76 642 aa17.81■□□□□ 0.44
CPSF4-203ENST00000430038 NAALADL1Q9UQQ1 740 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms