RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 CCDC33Q8N5R6 958 aa9.21□□□□□ -0.94
SMC6-204ENST00000428868 PLD5Q8N7P1 536 aa9.21□□□□□ -0.94
SMC6-204ENST00000428868 C12orf50Q8NA57 414 aaPredicted RBP9.21□□□□□ -0.94
SMC6-204ENST00000428868 VN1R2Q8NFZ6 395 aa9.21□□□□□ -0.94
SMC6-204ENST00000428868 RNF139Q8WU17 664 aa9.21□□□□□ -0.94
SMC6-204ENST00000428868 UBE2Q2Q8WVN8 375 aa9.21□□□□□ -0.94
SMC6-204ENST00000428868 FAF2Q96CS3 445 aa9.21□□□□□ -0.94
SMC6-204ENST00000428868 MYEOVQ96EZ4 313 aa9.21□□□□□ -0.94
SMC6-204ENST00000428868 TRMT2BQ96GJ1 504 aaKnown RBP9.21□□□□□ -0.94
SMC6-204ENST00000428868 ZNF512Q96ME7 567 aaPredicted RBP9.21□□□□□ -0.94
SMC6-204ENST00000428868 SAMD11Q96NU1 681 aa9.21□□□□□ -0.94
SMC6-204ENST00000428868 CSPG4P5Q96PW8 444 aa9.21□□□□□ -0.94
SMC6-204ENST00000428868 RNF157Q96PX1 679 aa9.21□□□□□ -0.94
SMC6-204ENST00000428868 RNF38Q9H0F5 515 aa9.21□□□□□ -0.94
SMC6-204ENST00000428868 ARHGEF38Q9NXL2 777 aa9.21□□□□□ -0.94
SMC6-204ENST00000428868 CLIC5Q9NZA1 410 aa9.21□□□□□ -0.94
SMC6-204ENST00000428868 AMACRQ9UHK6 382 aa9.21□□□□□ -0.94
SMC6-204ENST00000428868 KIAA1549LQ6ZVL6 1849 aa9.2□□□□□ -0.94
SMC6-204ENST00000428868 KCNU1A8MYU2 1149 aa9.2□□□□□ -0.94
SMC6-204ENST00000428868 CCDC188H7C350 402 aa9.2□□□□□ -0.94
SMC6-204ENST00000428868 TTI1O43156 1089 aa9.2□□□□□ -0.94
SMC6-204ENST00000428868 CREB3O43889 395 aa9.2□□□□□ -0.94
SMC6-204ENST00000428868 MFSD11O43934 449 aa9.2□□□□□ -0.94
SMC6-204ENST00000428868 PAGE1O75459 146 aa9.2□□□□□ -0.94
SMC6-204ENST00000428868 OAS1P00973 400 aaKnown RBP9.2□□□□□ -0.94
SMC6-204ENST00000428868 IGLV3-27P01718 113 aa9.2□□□□□ -0.94
SMC6-204ENST00000428868 LRG1P02750 347 aa9.2□□□□□ -0.94
SMC6-204ENST00000428868 GABRR2P28476 465 aa9.2□□□□□ -0.94
SMC6-204ENST00000428868 BMP8BP34820 402 aa9.2□□□□□ -0.94
SMC6-204ENST00000428868 COILP38432 576 aaPredicted RBP9.2□□□□□ -0.94
SMC6-204ENST00000428868 PSEN1P49768 467 aa9.2□□□□□ -0.94
SMC6-204ENST00000428868 KCNQ1P51787 676 aa9.2□□□□□ -0.94
SMC6-204ENST00000428868 TBX4P57082 545 aa9.2□□□□□ -0.94
SMC6-204ENST00000428868 NTHL1P78549 312 aa9.2□□□□□ -0.94
SMC6-204ENST00000428868 ZXDBP98169 803 aa9.2□□□□□ -0.94
SMC6-204ENST00000428868 OTUD4Q01804 1114 aaKnown RBP9.2□□□□□ -0.94
SMC6-204ENST00000428868 SLC10A2Q12908 348 aaPredicted RBP9.2□□□□□ -0.94
SMC6-204ENST00000428868 DPYSQ14117 519 aa9.2□□□□□ -0.94
SMC6-204ENST00000428868 VEPH1Q14D04 833 aa9.2□□□□□ -0.94
SMC6-204ENST00000428868 PDK2Q15119 407 aa9.2□□□□□ -0.94
SMC6-204ENST00000428868 TRIP4Q15650 581 aaPredicted RBP9.2□□□□□ -0.94
SMC6-204ENST00000428868 RAB30Q15771 203 aa9.2□□□□□ -0.94
SMC6-204ENST00000428868 ODF2Q5BJF6 829 aa9.2□□□□□ -0.94
SMC6-204ENST00000428868 EFHC2Q5JST6 749 aa9.2□□□□□ -0.94
SMC6-204ENST00000428868 PIK3R6Q5UE93 754 aa9.2□□□□□ -0.94
SMC6-204ENST00000428868 SNX30Q5VWJ9 437 aa9.2□□□□□ -0.94
SMC6-204ENST00000428868 NCBP2-AS2Q69YL0 99 aa9.2□□□□□ -0.94
SMC6-204ENST00000428868 SLC9A4Q6AI14 798 aa9.2□□□□□ -0.94
SMC6-204ENST00000428868 C8orf74Q6P047 294 aa9.2□□□□□ -0.94
SMC6-204ENST00000428868 C1orf228Q6PIY5 440 aa9.2□□□□□ -0.94
SMC6-204ENST00000428868 POTEHQ6S545 545 aa9.2□□□□□ -0.94
SMC6-204ENST00000428868 BBS12Q6ZW61 710 aa9.2□□□□□ -0.94
SMC6-204ENST00000428868 ARHGAP18Q8N392 663 aa9.2□□□□□ -0.94
SMC6-204ENST00000428868 GLIS1Q8NBF1 620 aa9.2□□□□□ -0.94
SMC6-204ENST00000428868 ACTL9Q8TC94 416 aa9.2□□□□□ -0.94
SMC6-204ENST00000428868 OVCA2Q8WZ82 227 aa9.2□□□□□ -0.94
SMC6-204ENST00000428868 UBXN4Q92575 508 aa9.2□□□□□ -0.94
SMC6-204ENST00000428868 RNF34Q969K3 372 aa9.2□□□□□ -0.94
SMC6-204ENST00000428868 MAGOHBQ96A72 148 aaKnown RBP9.2□□□□□ -0.94
SMC6-204ENST00000428868 TCEAL4Q96EI5 215 aa9.2□□□□□ -0.94
SMC6-204ENST00000428868 RPGRIP1Q96KN7 1286 aa9.2□□□□□ -0.94
SMC6-204ENST00000428868 CEP295NLQ96MC4 621 aa9.2□□□□□ -0.94
SMC6-204ENST00000428868 SERPINB11Q96P15 392 aa9.2□□□□□ -0.94
SMC6-204ENST00000428868 NCAPGQ9BPX3 1015 aa9.2□□□□□ -0.94
SMC6-204ENST00000428868 ZNF670Q9BS34 389 aa9.2□□□□□ -0.94
SMC6-204ENST00000428868 TRIM62Q9BVG3 475 aa9.2□□□□□ -0.94
SMC6-204ENST00000428868 COL25A1Q9BXS0 654 aaPredicted RBP9.2□□□□□ -0.94
SMC6-204ENST00000428868 WDCPQ9H6R7 721 aa9.2□□□□□ -0.94
SMC6-204ENST00000428868 ARHGEF4Q9NR80 690 aa9.2□□□□□ -0.94
SMC6-204ENST00000428868 GKN1Q9NS71 199 aa9.2□□□□□ -0.94
SMC6-204ENST00000428868 TRPM5Q9NZQ8 1165 aa9.2□□□□□ -0.94
SMC6-204ENST00000428868 MARCH2Q9P0N8 246 aa9.2□□□□□ -0.94
SMC6-204ENST00000428868 MSRAQ9UJ68 235 aa9.2□□□□□ -0.94
SMC6-204ENST00000428868 CDH22Q9UJ99 828 aa9.2□□□□□ -0.94
SMC6-204ENST00000428868 DNPEPQ9ULA0 475 aa9.2□□□□□ -0.94
SMC6-204ENST00000428868 HCFC2Q9Y5Z7 792 aa9.2□□□□□ -0.94
SMC6-204ENST00000428868 CUL9Q8IWT3 2517 aa9.2□□□□□ -0.94
SMC6-204ENST00000428868 GOLGA6L7A0A1B0GV03 622 aa9.19□□□□□ -0.94
SMC6-204ENST00000428868 ESYT3A0FGR9 886 aa9.19□□□□□ -0.94
SMC6-204ENST00000428868 BHMG1C9JSJ3 638 aaPredicted RBP9.19□□□□□ -0.94
SMC6-204ENST00000428868 EEF2KO00418 725 aaKnown RBP9.19□□□□□ -0.94
SMC6-204ENST00000428868 SCAMP3O14828 347 aaKnown RBP9.19□□□□□ -0.94
SMC6-204ENST00000428868 DCLK1O15075 740 aa9.19□□□□□ -0.94
SMC6-204ENST00000428868 MOSPD3O75425 235 aa9.19□□□□□ -0.94
SMC6-204ENST00000428868 LRIG2O94898 1065 aa9.19□□□□□ -0.94
SMC6-204ENST00000428868 HEXIM1O94992 359 aaKnown RBP9.19□□□□□ -0.94
SMC6-204ENST00000428868 MYBL2P10244 700 aa9.19□□□□□ -0.94
SMC6-204ENST00000428868 IRF1P10914 325 aa9.19□□□□□ -0.94
SMC6-204ENST00000428868 MYL4P12829 197 aa9.19□□□□□ -0.94
SMC6-204ENST00000428868 ETS1P14921 441 aa9.19□□□□□ -0.94
SMC6-204ENST00000428868 DESP17661 470 aa9.19□□□□□ -0.94
SMC6-204ENST00000428868 GBP1P32455 592 aa9.19□□□□□ -0.94
SMC6-204ENST00000428868 NRIP1P48552 1158 aa9.19□□□□□ -0.94
SMC6-204ENST00000428868 TERF1P54274 439 aa9.19□□□□□ -0.94
SMC6-204ENST00000428868 NRLP54845 237 aa9.19□□□□□ -0.94
SMC6-204ENST00000428868 VSNL1P62760 191 aa9.19□□□□□ -0.94
SMC6-204ENST00000428868 GBE1Q04446 702 aa9.19□□□□□ -0.94
SMC6-204ENST00000428868 PPP2R5DQ14738 602 aa9.19□□□□□ -0.94
SMC6-204ENST00000428868 TAF12Q16514 161 aa9.19□□□□□ -0.94
SMC6-204ENST00000428868 SLC5A9Q2M3M2 681 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms