RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 VN1R3Q9BXE9 311 aa11.83□□□□□ -0.52
CECR3-201ENST00000428828 NKX2-4Q9H2Z4 354 aa11.83□□□□□ -0.52
CECR3-201ENST00000428828 SYNCQ9H7C4 482 aa11.83□□□□□ -0.52
CECR3-201ENST00000428828 ACP6Q9NPH0 428 aa11.83□□□□□ -0.52
CECR3-201ENST00000428828 TMEM98Q9Y2Y6 226 aa11.83□□□□□ -0.52
CECR3-201ENST00000428828 PCDHA11Q9Y5I1 949 aa11.83□□□□□ -0.52
CECR3-201ENST00000428828 MYO9BQ13459 2157 aa11.83□□□□□ -0.52
CECR3-201ENST00000428828 A0A0J9YVX5 310 aa11.82□□□□□ -0.52
CECR3-201ENST00000428828 TMEM120BA0PK00 339 aa11.82□□□□□ -0.52
CECR3-201ENST00000428828 FAM170AA1A519 330 aa11.82□□□□□ -0.52
CECR3-201ENST00000428828 C2CD2LO14523 706 aa11.82□□□□□ -0.52
CECR3-201ENST00000428828 CYP26A1O43174 497 aa11.82□□□□□ -0.52
CECR3-201ENST00000428828 RIPK2O43353 540 aa11.82□□□□□ -0.52
CECR3-201ENST00000428828 FGF18O76093 207 aa11.82□□□□□ -0.52
CECR3-201ENST00000428828 T-ENOLP0DO92 83 aa11.82□□□□□ -0.52
CECR3-201ENST00000428828 VAV1P15498 845 aa11.82□□□□□ -0.52
CECR3-201ENST00000428828 DNAJB2P25686 324 aa11.82□□□□□ -0.52
CECR3-201ENST00000428828 SOX5P35711 763 aa11.82□□□□□ -0.52
CECR3-201ENST00000428828 RAB15P59190 212 aa11.82□□□□□ -0.52
CECR3-201ENST00000428828 VSTM1Q6UX27 236 aa11.82□□□□□ -0.52
CECR3-201ENST00000428828 ZDHHC24Q6UX98 284 aa11.82□□□□□ -0.52
CECR3-201ENST00000428828 METTL23Q86XA0 190 aa11.82□□□□□ -0.52
CECR3-201ENST00000428828 UBR7Q8N806 425 aa11.82□□□□□ -0.52
CECR3-201ENST00000428828 PIP4K2CQ8TBX8 421 aa11.82□□□□□ -0.52
CECR3-201ENST00000428828 ZNF398Q8TD17 642 aa11.82□□□□□ -0.52
CECR3-201ENST00000428828 CLP1Q92989 425 aaKnown RBP11.82□□□□□ -0.52
CECR3-201ENST00000428828 TUBGCP5Q96RT8 1024 aa11.82□□□□□ -0.52
CECR3-201ENST00000428828 CORO1BQ9BR76 489 aa11.82□□□□□ -0.52
CECR3-201ENST00000428828 AP1M1Q9BXS5 423 aa11.82□□□□□ -0.52
CECR3-201ENST00000428828 DPEP3Q9H4B8 488 aa11.82□□□□□ -0.52
CECR3-201ENST00000428828 CYP3A43Q9HB55 503 aa11.82□□□□□ -0.52
CECR3-201ENST00000428828 ALG13Q9NP73 1137 aaKnown RBP11.82□□□□□ -0.52
CECR3-201ENST00000428828 TUBA8Q9NY65 449 aaPredicted RBP11.82□□□□□ -0.52
CECR3-201ENST00000428828 MSRAQ9UJ68 235 aa11.82□□□□□ -0.52
CECR3-201ENST00000428828 PCDHB8Q9UN66 801 aa11.82□□□□□ -0.52
CECR3-201ENST00000428828 NME7Q9Y5B8 376 aa11.82□□□□□ -0.52
CECR3-201ENST00000428828 CDH23Q9H251 3354 aa11.82□□□□□ -0.52
CECR3-201ENST00000428828 TLDC2A0PJX2 215 aa11.82□□□□□ -0.52
CECR3-201ENST00000428828 CILPO75339 1184 aa11.82□□□□□ -0.52
CECR3-201ENST00000428828 ZWINTO95229 277 aa11.82□□□□□ -0.52
CECR3-201ENST00000428828 LMO2P25791 158 aa11.82□□□□□ -0.52
CECR3-201ENST00000428828 SSTR3P32745 418 aaPredicted RBP11.82□□□□□ -0.52
CECR3-201ENST00000428828 PPM1AP35813 382 aa11.82□□□□□ -0.52
CECR3-201ENST00000428828 GNL1P36915 607 aaPredicted RBP11.82□□□□□ -0.52
CECR3-201ENST00000428828 OXCT1P55809 520 aa11.82□□□□□ -0.52
CECR3-201ENST00000428828 PSMC1P62191 440 aaKnown RBP11.82□□□□□ -0.52
CECR3-201ENST00000428828 DR1Q01658 176 aa11.82□□□□□ -0.52
CECR3-201ENST00000428828 YWHAHQ04917 246 aaPredicted RBP11.82□□□□□ -0.52
CECR3-201ENST00000428828 ASIC2Q16515 512 aa11.82□□□□□ -0.52
CECR3-201ENST00000428828 RTP2Q5QGT7 225 aa11.82□□□□□ -0.52
CECR3-201ENST00000428828 PPP2R2DQ66LE6 453 aa11.82□□□□□ -0.52
CECR3-201ENST00000428828 OVOS1Q6IE37 1185 aa11.82□□□□□ -0.52
CECR3-201ENST00000428828 ARMCX6Q7L4S7 300 aa11.82□□□□□ -0.52
CECR3-201ENST00000428828 SPATA24Q86W54 205 aa11.82□□□□□ -0.52
CECR3-201ENST00000428828 TTC8Q8TAM2 541 aa11.82□□□□□ -0.52
CECR3-201ENST00000428828 NRG4Q8WWG1 115 aa11.82□□□□□ -0.52
CECR3-201ENST00000428828 HAUS1Q96CS2 278 aa11.82□□□□□ -0.52
CECR3-201ENST00000428828 HES6Q96HZ4 224 aa11.82□□□□□ -0.52
CECR3-201ENST00000428828 TGS1Q96RS0 853 aaKnown RBP11.82□□□□□ -0.52
CECR3-201ENST00000428828 LPIN3Q9BQK8 851 aa11.82□□□□□ -0.52
CECR3-201ENST00000428828 OXCT2Q9BYC2 517 aaPredicted RBP11.82□□□□□ -0.52
CECR3-201ENST00000428828 PACSIN2Q9UNF0 486 aaPredicted RBP11.82□□□□□ -0.52
CECR3-201ENST00000428828 PLXNA3P51805 1871 aa11.81□□□□□ -0.52
CECR3-201ENST00000428828 TRANK1O15050 2925 aa11.81□□□□□ -0.52
CECR3-201ENST00000428828 HNRNPRO43390 633 aaKnown RBP11.81□□□□□ -0.52
CECR3-201ENST00000428828 ENTPD5O75356 428 aa11.81□□□□□ -0.52
CECR3-201ENST00000428828 TROVE2P10155 538 aaKnown RBP eCLIP11.81□□□□□ -0.52
CECR3-201ENST00000428828 CD19P15391 556 aa11.81□□□□□ -0.52
CECR3-201ENST00000428828 WARSP23381 471 aaKnown RBP11.81□□□□□ -0.52
CECR3-201ENST00000428828 SLC18A1P54219 525 aa11.81□□□□□ -0.52
CECR3-201ENST00000428828 RNASE9P60153 205 aaKnown RBP11.81□□□□□ -0.52
CECR3-201ENST00000428828 PPARDQ03181 441 aa11.81□□□□□ -0.52
CECR3-201ENST00000428828 INCA1Q0VD86 236 aa11.81□□□□□ -0.52
CECR3-201ENST00000428828 ELAVL2Q12926 359 aaKnown RBP11.81□□□□□ -0.52
CECR3-201ENST00000428828 HNRNPDQ14103 355 aaKnown RBP11.81□□□□□ -0.52
CECR3-201ENST00000428828 GRM2Q14416 872 aa11.81□□□□□ -0.52
CECR3-201ENST00000428828 CCDC142Q17RM4 750 aa11.81□□□□□ -0.52
CECR3-201ENST00000428828 KHDC1Q4VXA5 237 aaKnown RBP11.81□□□□□ -0.52
CECR3-201ENST00000428828 SLC45A4Q5BKX6 768 aa11.81□□□□□ -0.52
CECR3-201ENST00000428828 VARS2Q5ST30 1063 aaKnown RBP11.81□□□□□ -0.52
CECR3-201ENST00000428828 KIAA1841Q6NSI8 718 aa11.81□□□□□ -0.52
CECR3-201ENST00000428828 PRSS55Q6UWB4 352 aaPredicted RBP11.81□□□□□ -0.52
CECR3-201ENST00000428828 ACOT1Q86TX2 421 aa11.81□□□□□ -0.52
CECR3-201ENST00000428828 SLC47A2Q86VL8 602 aa11.81□□□□□ -0.52
CECR3-201ENST00000428828 PASD1Q8IV76 773 aa11.81□□□□□ -0.52
CECR3-201ENST00000428828 GLYCTKQ8IVS8 523 aa11.81□□□□□ -0.52
CECR3-201ENST00000428828 TMEM86AQ8N2M4 240 aa11.81□□□□□ -0.52
CECR3-201ENST00000428828 TPCN2Q8NHX9 752 aa11.81□□□□□ -0.52
CECR3-201ENST00000428828 ERP27Q96DN0 273 aa11.81□□□□□ -0.52
CECR3-201ENST00000428828 ELOVL4Q9GZR5 314 aa11.81□□□□□ -0.52
CECR3-201ENST00000428828 DSEQ9UL01 958 aa11.81□□□□□ -0.52
CECR3-201ENST00000428828 CHKBQ9Y259 395 aa11.81□□□□□ -0.52
CECR3-201ENST00000428828 ARHGEF37A1IGU5 675 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 F8W8V4 182 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 SYN3O14994 580 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 PSMG1O95456 288 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 FGFR3P22607 806 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 GNA15P30679 374 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 BMPR1AP36894 532 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 TAP1Q03518 808 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms