RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 SUSD6Q92537 303 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 A0A1B0GTH6 734 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 CCNT2O60583 730 aaKnown RBP9.16□□□□□ -0.94
CTNND1-208ENST00000428599 VTNP04004 478 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 IFNGR2P38484 337 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 PSMC6P62333 389 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 BIKQ13323 160 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 SEZ6Q53EL9 994 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 CBWD3Q5JTY5 395 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 CBWD5Q5RIA9 395 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 RASGRP2Q7LDG7 609 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 ZFPM1Q8IX07 1006 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 CPB2Q96IY4 423 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 ACOX2Q99424 681 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 PDCD2LQ9BRP1 358 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 SHCBP1LQ9BZQ2 653 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 CNTNAP2Q9UHC6 1331 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 WTIPA6NIX2 430 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-208ENST00000428599 CENPXA8MT69 81 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 RTN3O95197 1032 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-208ENST00000428599 POLR2EP19388 210 aaKnown RBP9.16□□□□□ -0.94
CTNND1-208ENST00000428599 PAICSP22234 425 aaKnown RBP9.16□□□□□ -0.94
CTNND1-208ENST00000428599 PEX5P50542 639 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 HNRNPH2P55795 449 aaKnown RBP9.16□□□□□ -0.94
CTNND1-208ENST00000428599 CYP2A13Q16696 494 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 NECAB2Q7Z6G3 386 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 GATAD2AQ86YP4 633 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 DNERQ8NFT8 737 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 FAM172AQ8WUF8 416 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 RMND5BQ96G75 393 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-208ENST00000428599 EFCAB1Q9HAE3 211 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 GPAMQ9HCL2 828 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 PRKAG3Q9UGI9 489 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-208ENST00000428599 NCAM2O15394 837 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 ATP5BP06576 529 aaKnown RBP9.16□□□□□ -0.94
CTNND1-208ENST00000428599 TPBGLP0DKB5 382 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 AMD1P17707 334 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 TFE3P19532 575 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-208ENST00000428599 ATP6V1B2P21281 511 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 CCR4P51679 360 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 BST2Q10589 180 aaKnown RBP9.16□□□□□ -0.94
CTNND1-208ENST00000428599 TCEA2Q15560 299 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 DOK6Q6PKX4 331 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 CASP12Q6UXS9 341 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 KCNB2Q92953 911 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 GLMNQ92990 594 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 NACC2Q96BF6 587 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 NAT9Q9BTE0 207 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 ZNF518BQ9C0D4 1074 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 RAD21L1Q9H4I0 556 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 AGO4Q9HCK5 861 aaKnown RBP9.16□□□□□ -0.94
CTNND1-208ENST00000428599 ENOPH1Q9UHY7 261 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 AP4S1Q9Y587 144 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 N6AMT1Q9Y5N5 214 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 CASTOR2A6NHX0 329 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 SLCO1B7G3V0H7 640 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 RAD51BO15315 384 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 FGRP09769 529 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 ZNF286BP0CG31 522 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 VAV1P15498 845 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 ZNF7P17097 686 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-208ENST00000428599 CCR1P32246 355 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 COILP38432 576 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-208ENST00000428599 Q4G0T1 1027 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 TMEM154Q6P9G4 183 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 ZNF786Q8N393 782 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 OMDQ99983 421 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 SIKE1Q9BRV8 207 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 DCLK3Q9C098 648 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 GPRC5DQ9NZD1 345 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 SH3BP4Q9P0V3 963 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 ENTPD4Q9Y227 616 aa9.16□□□□□ -0.94
CTNND1-208ENST00000428599 TRIM24O15164 1050 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 PPP1R37O75864 691 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 ECDO95905 644 aaPredicted RBP9.15□□□□□ -0.94
CTNND1-208ENST00000428599 SERPINF2P08697 491 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 VIL1P09327 827 aaKnown RBP9.15□□□□□ -0.94
CTNND1-208ENST00000428599 CNTFP26441 200 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 TBX4P57082 545 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 POLR2LP62875 67 aaKnown RBP9.15□□□□□ -0.94
CTNND1-208ENST00000428599 PGM5Q15124 567 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 ATG16L2Q8NAA4 619 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 P2RX7Q99572 595 aaKnown RBP9.15□□□□□ -0.94
CTNND1-208ENST00000428599 MTMR12Q9C0I1 747 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 ZFYVE1Q9HBF4 777 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 AGPAT3Q9NRZ7 376 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 KLHL3Q9UH77 587 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 TMEM120BA0PK00 339 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 HIST1H2ABP04908 130 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 MPOP05164 745 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 SLC2A4P14672 509 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 KLRC1P26715 233 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 COPZ1P61923 177 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 MTF1Q14872 753 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 ZNHIT3Q15649 155 aaPredicted RBP9.15□□□□□ -0.94
CTNND1-208ENST00000428599 LY6KQ17RY6 165 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 SETMARQ53H47 684 aaPredicted RBP9.15□□□□□ -0.94
CTNND1-208ENST00000428599 OVOS1Q6IE37 1185 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 ILDR2Q71H61 639 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms