RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 HELQQ8TDG4 1101 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 TCP10LQ8TDR4 215 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 PDCD6IPQ8WUM4 868 aaKnown RBP5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 CAPSLQ8WWF8 208 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 IP6K1Q92551 441 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 VMP1Q96GC9 406 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 COG8Q96MW5 612 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 TWNKQ96RR1 684 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 SRPK1Q96SB4 655 aaKnown RBP5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 AGPAT1Q99943 283 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 TMEM79Q9BSE2 394 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 BRIP1Q9BX63 1249 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 ZC3H12CQ9C0D7 883 aaKnown RBP5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 SMYD3Q9H7B4 428 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 VRTNQ9H8Y1 702 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 PSTPIP2Q9H939 334 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 EHMT1Q9H9B1 1298 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 IFT122Q9HBG6 1241 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 ERVK-5Q9HDB9 667 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 ZC4H2Q9NQZ6 224 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 FBXO6Q9NRD1 293 aaPredicted RBP5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 LRRC4BQ9NT99 713 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 DNAJC17Q9NVM6 304 aaKnown RBP5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 KIF17Q9P2E2 1029 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 APEX2Q9UBZ4 518 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 ZNF229Q9UJW7 825 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 ZNF221Q9UK13 617 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 PSME2Q9UL46 239 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 GRID1Q9ULK0 1009 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 PCDHA12Q9UN75 941 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 NOSIPQ9Y314 301 aaKnown RBP5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 RTCBQ9Y3I0 505 aaKnown RBP5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 CDY2AQ9Y6F7 541 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 CDY1Q9Y6F8 540 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 NDUFB9Q9Y6M9 179 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 IVNS1ABPQ9Y6Y0 642 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 C5P01031 1676 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 DUOX1Q9NRD9 1551 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 A0A0G2JLW4 131 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 NPHP3-ACAD11A0A0J9YXS1 232 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 LOC105371267A0A1B0GV96 52 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 PABPN1LA6NDY0 278 aaKnown RBP5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 SMCO2A6NFE2 343 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 SLCO1B7G3V0H7 640 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 ANGPT2O15123 496 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 EIF3DO15371 548 aaKnown RBP eCLIP5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 CAPN5O15484 640 aaPredicted RBP5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 CLOCKO15516 846 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 CCNT1O60563 726 aaKnown RBP5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 ICMTO60725 284 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 MYO1DO94832 1006 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 TRIM16O95361 564 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 SERPINB2P05120 415 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 CYP1A2P05177 515 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 DLATP10515 647 aaKnown RBP5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 SLC5A1P13866 664 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 CREB1P16220 341 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 EIF2AK2P19525 551 aaKnown RBP5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 ITGAXP20702 1163 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 ABCB4P21439 1286 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 TCEA1P23193 301 aaKnown RBP5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 ME2P23368 584 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 CPOXP36551 454 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 PHKA1P46020 1223 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 ETV1P50549 477 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 BMXP51813 675 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 AP3M2P53677 418 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 AP2S1P53680 142 aaPredicted RBP5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 ALDH18A1P54886 795 aaKnown RBP5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 AQP5P55064 265 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 CASP7P55210 303 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 TPTEP56180 551 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 MCCD1P59942 119 aaPredicted RBP5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 DSTNP60981 165 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 FOXO4P98177 505 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 SLC18A2Q05940 514 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 FAAP100Q0VG06 881 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 TROAPQ12815 778 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 OVGP1Q12889 678 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 EPS8Q12929 822 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 NFX1Q12986 1120 aaKnown RBP5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 PDIA2Q13087 525 aaKnown RBP5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 NFE2L1Q14494 772 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 COG2Q14746 738 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 PSMD6Q15008 389 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 PUM3Q15397 648 aaKnown RBP5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 MAPRE1Q15691 268 aaKnown RBP5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 PKN2Q16513 984 aaKnown RBP5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 IL17AQ16552 155 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 DGUOKQ16854 277 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 KNOP1Q1ED39 458 aaKnown RBP5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 SPATS1Q496A3 300 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 CDONQ4KMG0 1287 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 TMEM119Q4V9L6 283 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 DCAF17Q5H9S7 520 aaPredicted RBP5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 TTC39BQ5VTQ0 682 aaPredicted RBP5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 ELMSAN1Q6PJG2 1045 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 KIF6Q6ZMV9 814 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 C15orf52Q6ZUT6 534 aaKnown RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms