RNA–Protein interactions for RNA: ENST00000426431.2

SP1-202, Transcript of Sp1 transcription factor, humanhuman

TSL 1 (best) BASIC

Gene SP1, Length 7,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-202ENST00000426431 MRPL48Q96GC5 212 aaKnown RBP10.44□□□□□ -0.74
SP1-202ENST00000426431 PLEKHA8Q96JA3 519 aa10.44□□□□□ -0.74
SP1-202ENST00000426431 CPNE1Q99829 537 aa10.44□□□□□ -0.74
SP1-202ENST00000426431 CCDC134Q9H6E4 229 aa10.44□□□□□ -0.74
SP1-202ENST00000426431 SPASTQ9UBP0 616 aa10.44□□□□□ -0.74
SP1-202ENST00000426431 TBC1D4O60343 1298 aa10.44□□□□□ -0.74
SP1-202ENST00000426431 PTPN7P35236 360 aa10.44□□□□□ -0.74
SP1-202ENST00000426431 HALP42357 657 aa10.44□□□□□ -0.74
SP1-202ENST00000426431 SNRPD1P62314 119 aaKnown RBP10.44□□□□□ -0.74
SP1-202ENST00000426431 SULT2A1Q06520 285 aa10.44□□□□□ -0.74
SP1-202ENST00000426431 SLC39A12Q504Y0 691 aa10.44□□□□□ -0.74
SP1-202ENST00000426431 ARMC12Q5T9G4 340 aa10.44□□□□□ -0.74
SP1-202ENST00000426431 CXCL17Q6UXB2 119 aa10.44□□□□□ -0.74
SP1-202ENST00000426431 POLNQ7Z5Q5 900 aa10.44□□□□□ -0.74
SP1-202ENST00000426431 TRIM69Q86WT6 500 aa10.44□□□□□ -0.74
SP1-202ENST00000426431 HJURPQ8NCD3 748 aaPredicted RBP10.44□□□□□ -0.74
SP1-202ENST00000426431 SUSD6Q92537 303 aa10.44□□□□□ -0.74
SP1-202ENST00000426431 CASP10Q92851 521 aa10.44□□□□□ -0.74
SP1-202ENST00000426431 POP5Q969H6 163 aaKnown RBP10.44□□□□□ -0.74
SP1-202ENST00000426431 GFM2Q969S9 779 aaKnown RBP10.44□□□□□ -0.74
SP1-202ENST00000426431 PRRG3Q9BZD7 231 aa10.44□□□□□ -0.74
SP1-202ENST00000426431 TAS2R13Q9NYV9 303 aa10.44□□□□□ -0.74
SP1-202ENST00000426431 BRMS1LQ5PSV4 323 aa10.44□□□□□ -0.74
SP1-202ENST00000426431 TRPM4Q8TD43 1214 aa10.44□□□□□ -0.74
SP1-202ENST00000426431 YIPF2Q9BWQ6 316 aa10.44□□□□□ -0.74
SP1-202ENST00000426431 CNGB3Q9NQW8 809 aa10.44□□□□□ -0.74
SP1-202ENST00000426431 CTNNAL1Q9UBT7 734 aa10.44□□□□□ -0.74
SP1-202ENST00000426431 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.44□□□□□ -0.74
SP1-202ENST00000426431 C1QTNF3-AMACRE9PGA6 284 aa10.44□□□□□ -0.74
SP1-202ENST00000426431 KCNJ1P48048 391 aa10.44□□□□□ -0.74
SP1-202ENST00000426431 VSTM1Q6UX27 236 aa10.44□□□□□ -0.74
SP1-202ENST00000426431 HEXDCQ8WVB3 486 aa10.44□□□□□ -0.74
SP1-202ENST00000426431 UBE2E3Q969T4 207 aa10.44□□□□□ -0.74
SP1-202ENST00000426431 MAGEB18Q96M61 343 aa10.44□□□□□ -0.74
SP1-202ENST00000426431 CYLDQ9NQC7 956 aa10.44□□□□□ -0.74
SP1-202ENST00000426431 ARHGAP20Q9P2F6 1191 aa10.44□□□□□ -0.74
SP1-202ENST00000426431 ERVK-10P10266 1014 aa10.43□□□□□ -0.74
SP1-202ENST00000426431 MAPK9P45984 424 aa10.43□□□□□ -0.74
SP1-202ENST00000426431 ALDH18A1P54886 795 aaKnown RBP10.43□□□□□ -0.74
SP1-202ENST00000426431 PPIGQ13427 754 aaKnown RBP eCLIP10.43□□□□□ -0.74
SP1-202ENST00000426431 ANKS6Q68DC2 871 aa10.43□□□□□ -0.74
SP1-202ENST00000426431 ZNF662Q6ZS27 426 aa10.43□□□□□ -0.74
SP1-202ENST00000426431 ETNPPLQ8TBG4 499 aa10.43□□□□□ -0.74
SP1-202ENST00000426431 TATDN2Q93075 761 aa10.43□□□□□ -0.74
SP1-202ENST00000426431 CAVIN3Q969G5 261 aa10.43□□□□□ -0.74
SP1-202ENST00000426431 ST6GALNAC4Q9H4F1 302 aa10.43□□□□□ -0.74
SP1-202ENST00000426431 GOLGA8RI6L899 631 aa10.43□□□□□ -0.74
SP1-202ENST00000426431 PARP6Q2NL67 630 aa10.43□□□□□ -0.74
SP1-202ENST00000426431 FAM46CQ5VWP2 391 aa10.43□□□□□ -0.74
SP1-202ENST00000426431 PHACTR4Q8IZ21 702 aa10.43□□□□□ -0.74
SP1-202ENST00000426431 C4orf33Q8N1A6 199 aa10.43□□□□□ -0.74
SP1-202ENST00000426431 QRFPRQ96P65 431 aa10.43□□□□□ -0.74
SP1-202ENST00000426431 IRX2Q9BZI1 471 aaPredicted RBP10.43□□□□□ -0.74
SP1-202ENST00000426431 MLXIPLQ9NP71 852 aa10.43□□□□□ -0.74
SP1-202ENST00000426431 RPTORQ8N122 1335 aa10.43□□□□□ -0.74
SP1-202ENST00000426431 O00370 1275 aa10.43□□□□□ -0.74
SP1-202ENST00000426431 MARSP56192 900 aaKnown RBP10.43□□□□□ -0.74
SP1-202ENST00000426431 MROH9Q5TGP6 573 aa10.43□□□□□ -0.74
SP1-202ENST00000426431 SMYD5Q6GMV2 418 aa10.43□□□□□ -0.74
SP1-202ENST00000426431 MCOLN3Q8TDD5 553 aa10.43□□□□□ -0.74
SP1-202ENST00000426431 CCT8L2Q96SF2 557 aa10.43□□□□□ -0.74
SP1-202ENST00000426431 KATNA1O75449 491 aa10.43□□□□□ -0.74
SP1-202ENST00000426431 ZNF143P52747 638 aaPredicted RBP10.43□□□□□ -0.74
SP1-202ENST00000426431 TUSC3Q13454 348 aa10.43□□□□□ -0.74
SP1-202ENST00000426431 CHI3L2Q15782 390 aa10.43□□□□□ -0.74
SP1-202ENST00000426431 SPRYD7Q5W111 196 aa10.43□□□□□ -0.74
SP1-202ENST00000426431 DEFB106AQ8N104 65 aa10.43□□□□□ -0.74
SP1-202ENST00000426431 HAS1Q92839 578 aa10.43□□□□□ -0.74
SP1-202ENST00000426431 RAD21L1Q9H4I0 556 aa10.43□□□□□ -0.74
SP1-202ENST00000426431 PIK3C2AO00443 1686 aa10.43□□□□□ -0.74
SP1-202ENST00000426431 MLNP12872 115 aa10.43□□□□□ -0.74
SP1-202ENST00000426431 ITGB6P18564 788 aa10.43□□□□□ -0.74
SP1-202ENST00000426431 SCNN1BP51168 640 aa10.43□□□□□ -0.74
SP1-202ENST00000426431 PRKAA1Q13131 559 aa10.43□□□□□ -0.74
SP1-202ENST00000426431 NUP93Q8N1F7 819 aa10.43□□□□□ -0.74
SP1-202ENST00000426431 HIPK4Q8NE63 616 aa10.43□□□□□ -0.74
SP1-202ENST00000426431 DUSP9Q99956 384 aaKnown RBP10.43□□□□□ -0.74
SP1-202ENST00000426431 CDT1Q9H211 546 aa10.43□□□□□ -0.74
SP1-202ENST00000426431 ZCCHC17Q9NP64 241 aaKnown RBP10.43□□□□□ -0.74
SP1-202ENST00000426431 NPHS2Q9NP85 383 aa10.43□□□□□ -0.74
SP1-202ENST00000426431 H2AFY2Q9P0M6 372 aaPredicted RBP10.43□□□□□ -0.74
SP1-202ENST00000426431 TRIM10Q9UDY6 481 aa10.43□□□□□ -0.74
SP1-202ENST00000426431 TNPO3Q9Y5L0 923 aaKnown RBP10.43□□□□□ -0.74
SP1-202ENST00000426431 RASSF10A6NK89 507 aa10.43□□□□□ -0.74
SP1-202ENST00000426431 MTA2O94776 668 aa10.43□□□□□ -0.74
SP1-202ENST00000426431 SELPP16109 830 aa10.43□□□□□ -0.74
SP1-202ENST00000426431 HSD17B3P37058 310 aa10.43□□□□□ -0.74
SP1-202ENST00000426431 IRAK1BP1Q5VVH5 260 aa10.43□□□□□ -0.74
SP1-202ENST00000426431 PRMT9Q6P2P2 845 aa10.43□□□□□ -0.74
SP1-202ENST00000426431 KDM7AQ6ZMT4 941 aa10.43□□□□□ -0.74
SP1-202ENST00000426431 STRA8Q7Z7C7 330 aa10.43□□□□□ -0.74
SP1-202ENST00000426431 FAM162AQ96A26 154 aa10.43□□□□□ -0.74
SP1-202ENST00000426431 FUCA2Q9BTY2 467 aa10.43□□□□□ -0.74
SP1-202ENST00000426431 NIFKQ9BYG3 293 aaKnown RBP10.43□□□□□ -0.74
SP1-202ENST00000426431 IL22Q9GZX6 179 aa10.43□□□□□ -0.74
SP1-202ENST00000426431 WARS2Q9UGM6 360 aaKnown RBP10.43□□□□□ -0.74
SP1-202ENST00000426431 DNALI1O14645 258 aaPredicted RBP10.42□□□□□ -0.74
SP1-202ENST00000426431 MMP13P45452 471 aa10.42□□□□□ -0.74
SP1-202ENST00000426431 ZC3H12BQ5HYM0 836 aaKnown RBP10.42□□□□□ -0.74
SP1-202ENST00000426431 ZDHHC20Q5W0Z9 365 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms