RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 ITGAVP06756 1048 aa13.81□□□□□ -0.2
USP42-203ENST00000426246 SMPD1P17405 629 aa13.81□□□□□ -0.2
USP42-203ENST00000426246 NELFEP18615 380 aaKnown RBP13.81□□□□□ -0.2
USP42-203ENST00000426246 CYP2F1P24903 491 aa13.81□□□□□ -0.2
USP42-203ENST00000426246 ASPAP45381 313 aa13.81□□□□□ -0.2
USP42-203ENST00000426246 ENPEPQ07075 957 aa13.81□□□□□ -0.2
USP42-203ENST00000426246 FASTKD1Q53R41 847 aaKnown RBP13.81□□□□□ -0.2
USP42-203ENST00000426246 SLC26A11Q86WA9 606 aa13.81□□□□□ -0.2
USP42-203ENST00000426246 TREML1Q86YW5 311 aa13.81□□□□□ -0.2
USP42-203ENST00000426246 SLC4A11Q8NBS3 891 aa13.81□□□□□ -0.2
USP42-203ENST00000426246 MRPL45Q9BRJ2 306 aaKnown RBP13.81□□□□□ -0.2
USP42-203ENST00000426246 DPP3Q9NY33 737 aa13.81□□□□□ -0.2
USP42-203ENST00000426246 FLRT1Q9NZU1 646 aa13.81□□□□□ -0.2
USP42-203ENST00000426246 LGALS13Q9UHV8 139 aa13.81□□□□□ -0.2
USP42-203ENST00000426246 APOBEC2Q9Y235 224 aaKnown RBP13.81□□□□□ -0.2
USP42-203ENST00000426246 RPS6KL1Q9Y6S9 549 aa13.81□□□□□ -0.2
USP42-203ENST00000426246 DCAF8L1A6NGE4 600 aa13.81□□□□□ -0.2
USP42-203ENST00000426246 APOC4-APOC2K7ER74 178 aa13.81□□□□□ -0.2
USP42-203ENST00000426246 ABLIM1O14639 778 aa13.81□□□□□ -0.2
USP42-203ENST00000426246 HSPA4LO95757 839 aa13.81□□□□□ -0.2
USP42-203ENST00000426246 APOC2P02655 101 aa13.81□□□□□ -0.2
USP42-203ENST00000426246 P4HA1P13674 534 aa13.81□□□□□ -0.2
USP42-203ENST00000426246 TRIP10Q15642 601 aa13.81□□□□□ -0.2
USP42-203ENST00000426246 GEN1Q17RS7 908 aa13.81□□□□□ -0.2
USP42-203ENST00000426246 C15orf39Q6ZRI6 1047 aa13.81□□□□□ -0.2
USP42-203ENST00000426246 BBS12Q6ZW61 710 aa13.81□□□□□ -0.2
USP42-203ENST00000426246 OSMRQ99650 979 aa13.81□□□□□ -0.2
USP42-203ENST00000426246 SYT15Q9BQS2 421 aa13.81□□□□□ -0.2
USP42-203ENST00000426246 WDR83Q9BRX9 315 aaKnown RBP13.81□□□□□ -0.2
USP42-203ENST00000426246 TINF2Q9BSI4 451 aa13.81□□□□□ -0.2
USP42-203ENST00000426246 NT5C1AQ9BXI3 368 aa13.81□□□□□ -0.2
USP42-203ENST00000426246 SMARCAD1Q9H4L7 1026 aa13.81□□□□□ -0.2
USP42-203ENST00000426246 CCDC134Q9H6E4 229 aa13.81□□□□□ -0.2
USP42-203ENST00000426246 EBF2Q9HAK2 575 aa13.81□□□□□ -0.2
USP42-203ENST00000426246 SLC24A2Q9UI40 661 aa13.81□□□□□ -0.2
USP42-203ENST00000426246 PAPSS1O43252 624 aaPredicted RBP13.8□□□□□ -0.2
USP42-203ENST00000426246 OAS1P00973 400 aaKnown RBP13.8□□□□□ -0.2
USP42-203ENST00000426246 LGALS2P05162 132 aa13.8□□□□□ -0.2
USP42-203ENST00000426246 ABCD1P33897 745 aa13.8□□□□□ -0.2
USP42-203ENST00000426246 ARL4AP40617 200 aa13.8□□□□□ -0.2
USP42-203ENST00000426246 ZNF157P51786 506 aaPredicted RBP13.8□□□□□ -0.2
USP42-203ENST00000426246 EFNA5P52803 228 aa13.8□□□□□ -0.2
USP42-203ENST00000426246 MCL1Q07820 350 aa13.8□□□□□ -0.2
USP42-203ENST00000426246 LAMC2Q13753 1193 aa13.8□□□□□ -0.2
USP42-203ENST00000426246 C17orf99Q6UX52 265 aa13.8□□□□□ -0.2
USP42-203ENST00000426246 C4orf50Q6ZRC1 276 aa13.8□□□□□ -0.2
USP42-203ENST00000426246 RASSF3Q86WH2 238 aa13.8□□□□□ -0.2
USP42-203ENST00000426246 SLC35B2Q8TB61 432 aa13.8□□□□□ -0.2
USP42-203ENST00000426246 DCAKDQ8WVC6 231 aa13.8□□□□□ -0.2
USP42-203ENST00000426246 ZNF669Q96BR6 464 aaPredicted RBP13.8□□□□□ -0.2
USP42-203ENST00000426246 LRMDAQ9H2I8 198 aa13.8□□□□□ -0.2
USP42-203ENST00000426246 VCXQ9H320 206 aa13.8□□□□□ -0.2
USP42-203ENST00000426246 SETD4Q9NVD3 440 aa13.8□□□□□ -0.2
USP42-203ENST00000426246 SLC15A5A6NIM6 579 aa13.8□□□□□ -0.2
USP42-203ENST00000426246 ITM2AO43736 263 aa13.8□□□□□ -0.2
USP42-203ENST00000426246 TYROBPO43914 113 aa13.8□□□□□ -0.2
USP42-203ENST00000426246 ATP5HO75947 161 aa13.8□□□□□ -0.2
USP42-203ENST00000426246 C22orf31O95567 290 aa13.8□□□□□ -0.2
USP42-203ENST00000426246 SLC10A3P09131 477 aa13.8□□□□□ -0.2
USP42-203ENST00000426246 HOXC6P09630 235 aa13.8□□□□□ -0.2
USP42-203ENST00000426246 GNL1P36915 607 aaPredicted RBP13.8□□□□□ -0.2
USP42-203ENST00000426246 POU5F1BQ06416 359 aa13.8□□□□□ -0.2
USP42-203ENST00000426246 ASPHQ12797 758 aa13.8□□□□□ -0.2
USP42-203ENST00000426246 LRRC74BQ6ZQY2 392 aa13.8□□□□□ -0.2
USP42-203ENST00000426246 WDR75Q8IWA0 830 aaKnown RBP13.8□□□□□ -0.2
USP42-203ENST00000426246 RYBPQ8N488 228 aaPredicted RBP13.8□□□□□ -0.2
USP42-203ENST00000426246 NAT8LQ8N9F0 302 aa13.8□□□□□ -0.2
USP42-203ENST00000426246 HASPINQ8TF76 798 aa13.8□□□□□ -0.2
USP42-203ENST00000426246 EDEM1Q92611 657 aa13.8□□□□□ -0.2
USP42-203ENST00000426246 LENG1Q96BZ8 264 aaPredicted RBP13.8□□□□□ -0.2
USP42-203ENST00000426246 APOPT1Q96IL0 206 aa13.8□□□□□ -0.2
USP42-203ENST00000426246 DCLRE1BQ9H816 532 aa13.8□□□□□ -0.2
USP42-203ENST00000426246 PTPRHQ9HD43 1115 aa13.8□□□□□ -0.2
USP42-203ENST00000426246 SNX10Q9Y5X0 201 aa13.8□□□□□ -0.2
USP42-203ENST00000426246 MAP3K13O43283 966 aa13.79□□□□□ -0.2
USP42-203ENST00000426246 ENO3P13929 434 aaPredicted RBP13.79□□□□□ -0.2
USP42-203ENST00000426246 CCR10P46092 362 aa13.79□□□□□ -0.2
USP42-203ENST00000426246 YWHAZP63104 245 aaKnown RBP13.79□□□□□ -0.2
USP42-203ENST00000426246 PITX1P78337 314 aaPredicted RBP13.79□□□□□ -0.2
USP42-203ENST00000426246 CDK16Q00536 496 aa13.79□□□□□ -0.2
USP42-203ENST00000426246 SEPT6Q14141 434 aa13.79□□□□□ -0.2
USP42-203ENST00000426246 ZNF618Q5T7W0 954 aa13.79□□□□□ -0.2
USP42-203ENST00000426246 TTC39BQ5VTQ0 682 aaPredicted RBP13.79□□□□□ -0.2
USP42-203ENST00000426246 IER5Q5VY09 327 aa13.79□□□□□ -0.2
USP42-203ENST00000426246 ARMC3Q5W041 872 aa13.79□□□□□ -0.2
USP42-203ENST00000426246 ANO7Q6IWH7 933 aa13.79□□□□□ -0.2
USP42-203ENST00000426246 RIBC1Q8N443 379 aaPredicted RBP13.79□□□□□ -0.2
USP42-203ENST00000426246 ATP2A3Q93084 1043 aa13.79□□□□□ -0.2
USP42-203ENST00000426246 VCPIP1Q96JH7 1222 aa13.79□□□□□ -0.2
USP42-203ENST00000426246 NDE1Q9NXR1 346 aa13.79□□□□□ -0.2
USP42-203ENST00000426246 LUC7L3O95232 432 aaKnown RBP13.79□□□□□ -0.2
USP42-203ENST00000426246 MOCS2O96007 188 aaPredicted RBP13.79□□□□□ -0.2
USP42-203ENST00000426246 EIF4BP23588 611 aaKnown RBP13.79□□□□□ -0.2
USP42-203ENST00000426246 PKNOX1P55347 436 aa13.79□□□□□ -0.2
USP42-203ENST00000426246 EFHC2Q5JST6 749 aa13.79□□□□□ -0.2
USP42-203ENST00000426246 FAM219BQ5XKK7 198 aa13.79□□□□□ -0.2
USP42-203ENST00000426246 UNC5AQ6ZN44 842 aa13.79□□□□□ -0.2
USP42-203ENST00000426246 RIPOR1Q6ZS17 1223 aa13.79□□□□□ -0.2
USP42-203ENST00000426246 SCUBE1Q8IWY4 988 aa13.79□□□□□ -0.2
USP42-203ENST00000426246 PAF1Q8N7H5 531 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms