RNA–Protein interactions for RNA: ENST00000425887.2

AC008268.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC008268.1, Length 1,119 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008268.1-201ENST00000425887 TFE3P19532 575 aaPredicted RBP11.84□□□□□ -0.51
AC008268.1-201ENST00000425887 ITIH2P19823 946 aa11.84□□□□□ -0.51
AC008268.1-201ENST00000425887 HOXC13P31276 330 aa11.84□□□□□ -0.51
AC008268.1-201ENST00000425887 CCR1P32246 355 aa11.84□□□□□ -0.51
AC008268.1-201ENST00000425887 OR1D2P34982 312 aa11.84□□□□□ -0.51
AC008268.1-201ENST00000425887 GJC1P36383 396 aa11.84□□□□□ -0.51
AC008268.1-201ENST00000425887 ZNF33AQ06730 810 aa11.84□□□□□ -0.51
AC008268.1-201ENST00000425887 DUSP4Q13115 394 aa11.84□□□□□ -0.51
AC008268.1-201ENST00000425887 MGAT5BQ3V5L5 792 aa11.84□□□□□ -0.51
AC008268.1-201ENST00000425887 PDE12Q6L8Q7 609 aaKnown RBP11.84□□□□□ -0.51
AC008268.1-201ENST00000425887 PRSS55Q6UWB4 352 aaPredicted RBP11.84□□□□□ -0.51
AC008268.1-201ENST00000425887 CEP128Q6ZU80 1094 aa11.84□□□□□ -0.51
AC008268.1-201ENST00000425887 TAC4Q86UU9 113 aa11.84□□□□□ -0.51
AC008268.1-201ENST00000425887 VPS52Q8N1B4 723 aa11.84□□□□□ -0.51
AC008268.1-201ENST00000425887 ALLCQ8N6M5 410 aa11.84□□□□□ -0.51
AC008268.1-201ENST00000425887 PLD5Q8N7P1 536 aa11.84□□□□□ -0.51
AC008268.1-201ENST00000425887 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.84□□□□□ -0.51
AC008268.1-201ENST00000425887 RNF139Q8WU17 664 aa11.84□□□□□ -0.51
AC008268.1-201ENST00000425887 HAUS1Q96CS2 278 aa11.84□□□□□ -0.51
AC008268.1-201ENST00000425887 C1orf74Q96LT6 269 aa11.84□□□□□ -0.51
AC008268.1-201ENST00000425887 CSPG4P5Q96PW8 444 aa11.84□□□□□ -0.51
AC008268.1-201ENST00000425887 PHACTR1Q9C0D0 580 aa11.84□□□□□ -0.51
AC008268.1-201ENST00000425887 BRD8Q9H0E9 1235 aa11.84□□□□□ -0.51
AC008268.1-201ENST00000425887 EPC1Q9H2F5 836 aa11.84□□□□□ -0.51
AC008268.1-201ENST00000425887 WDCPQ9H6R7 721 aa11.84□□□□□ -0.51
AC008268.1-201ENST00000425887 FAM204AQ9H8W3 233 aa11.84□□□□□ -0.51
AC008268.1-201ENST00000425887 DONSONQ9NYP3 566 aa11.84□□□□□ -0.51
AC008268.1-201ENST00000425887 UXTQ9UBK9 157 aaPredicted RBP11.84□□□□□ -0.51
AC008268.1-201ENST00000425887 R3HDM2Q9Y2K5 976 aaKnown RBP11.84□□□□□ -0.51
AC008268.1-201ENST00000425887 YBX2Q9Y2T7 364 aaKnown RBP11.84□□□□□ -0.51
AC008268.1-201ENST00000425887 CLUHO75153 1309 aa11.84□□□□□ -0.51
AC008268.1-201ENST00000425887 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.83□□□□□ -0.52
AC008268.1-201ENST00000425887 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.83□□□□□ -0.52
AC008268.1-201ENST00000425887 KCNU1A8MYU2 1149 aa11.83□□□□□ -0.52
AC008268.1-201ENST00000425887 MAP2K7O14733 419 aa11.83□□□□□ -0.52
AC008268.1-201ENST00000425887 MCF2LO15068 1137 aa11.83□□□□□ -0.52
AC008268.1-201ENST00000425887 NCAM2O15394 837 aa11.83□□□□□ -0.52
AC008268.1-201ENST00000425887 ARHGEF15O94989 841 aa11.83□□□□□ -0.52
AC008268.1-201ENST00000425887 CA3P07451 260 aa11.83□□□□□ -0.52
AC008268.1-201ENST00000425887 CD48P09326 243 aa11.83□□□□□ -0.52
AC008268.1-201ENST00000425887 KRT10P13645 584 aa11.83□□□□□ -0.52
AC008268.1-201ENST00000425887 PFKLP17858 780 aa11.83□□□□□ -0.52
AC008268.1-201ENST00000425887 ATF6P18850 670 aa11.83□□□□□ -0.52
AC008268.1-201ENST00000425887 ECHS1P30084 290 aa11.83□□□□□ -0.52
AC008268.1-201ENST00000425887 BMPR1AP36894 532 aa11.83□□□□□ -0.52
AC008268.1-201ENST00000425887 SLC7A5Q01650 507 aa11.83□□□□□ -0.52
AC008268.1-201ENST00000425887 ADCY2Q08462 1091 aa11.83□□□□□ -0.52
AC008268.1-201ENST00000425887 CBLBQ13191 982 aa11.83□□□□□ -0.52
AC008268.1-201ENST00000425887 DPYSQ14117 519 aa11.83□□□□□ -0.52
AC008268.1-201ENST00000425887 DDR2Q16832 855 aa11.83□□□□□ -0.52
AC008268.1-201ENST00000425887 PROX2Q3B8N5 592 aa11.83□□□□□ -0.52
AC008268.1-201ENST00000425887 PDZD4Q76G19 769 aaPredicted RBP11.83□□□□□ -0.52
AC008268.1-201ENST00000425887 HDXQ7Z353 690 aa11.83□□□□□ -0.52
AC008268.1-201ENST00000425887 ADAT2Q7Z6V5 191 aaKnown RBP11.83□□□□□ -0.52
AC008268.1-201ENST00000425887 FAM131BQ86XD5 332 aa11.83□□□□□ -0.52
AC008268.1-201ENST00000425887 RFX6Q8HWS3 928 aa11.83□□□□□ -0.52
AC008268.1-201ENST00000425887 CCDC185Q8N715 623 aa11.83□□□□□ -0.52
AC008268.1-201ENST00000425887 PQLC3Q8N755 202 aa11.83□□□□□ -0.52
AC008268.1-201ENST00000425887 PCDH19Q8TAB3 1148 aa11.83□□□□□ -0.52
AC008268.1-201ENST00000425887 ACTL9Q8TC94 416 aa11.83□□□□□ -0.52
AC008268.1-201ENST00000425887 C1orf54Q8WWF1 131 aa11.83□□□□□ -0.52
AC008268.1-201ENST00000425887 CASKIN2Q8WXE0 1202 aa11.83□□□□□ -0.52
AC008268.1-201ENST00000425887 NDRG1Q92597 394 aaKnown RBP11.83□□□□□ -0.52
AC008268.1-201ENST00000425887 P3H4Q92791 437 aa11.83□□□□□ -0.52
AC008268.1-201ENST00000425887 FBXO32Q969P5 355 aa11.83□□□□□ -0.52
AC008268.1-201ENST00000425887 SLC39A13Q96H72 371 aa11.83□□□□□ -0.52
AC008268.1-201ENST00000425887 B3GALT6Q96L58 329 aa11.83□□□□□ -0.52
AC008268.1-201ENST00000425887 PGLYRP2Q96PD5 576 aa11.83□□□□□ -0.52
AC008268.1-201ENST00000425887 PBX4Q9BYU1 374 aa11.83□□□□□ -0.52
AC008268.1-201ENST00000425887 CRISPLD1Q9H336 500 aa11.83□□□□□ -0.52
AC008268.1-201ENST00000425887 DHX35Q9H5Z1 703 aaKnown RBP11.83□□□□□ -0.52
AC008268.1-201ENST00000425887 PCDH9Q9HC56 1237 aa11.83□□□□□ -0.52
AC008268.1-201ENST00000425887 KLHL11Q9NVR0 708 aa11.83□□□□□ -0.52
AC008268.1-201ENST00000425887 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.83□□□□□ -0.52
AC008268.1-201ENST00000425887 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.83□□□□□ -0.52
AC008268.1-201ENST00000425887 RABGEF1Q9UJ41 708 aa11.83□□□□□ -0.52
AC008268.1-201ENST00000425887 HBS1LQ9Y450 684 aaKnown RBP11.83□□□□□ -0.52
AC008268.1-201ENST00000425887 PCDHA11Q9Y5I1 949 aa11.83□□□□□ -0.52
AC008268.1-201ENST00000425887 LAMA3Q16787 3333 aa11.83□□□□□ -0.52
AC008268.1-201ENST00000425887 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.82□□□□□ -0.52
AC008268.1-201ENST00000425887 A0A1W2PQH9 124 aa11.82□□□□□ -0.52
AC008268.1-201ENST00000425887 BCLAF3A2AJT9 711 aaKnown RBP11.82□□□□□ -0.52
AC008268.1-201ENST00000425887 LINC01553A4QN01 128 aa11.82□□□□□ -0.52
AC008268.1-201ENST00000425887 SLC38A8A6NNN8 435 aa11.82□□□□□ -0.52
AC008268.1-201ENST00000425887 FGF10O15520 208 aaPredicted RBP11.82□□□□□ -0.52
AC008268.1-201ENST00000425887 ADAM12O43184 909 aa11.82□□□□□ -0.52
AC008268.1-201ENST00000425887 IGLV3-27P01718 113 aa11.82□□□□□ -0.52
AC008268.1-201ENST00000425887 ADH1AP07327 375 aa11.82□□□□□ -0.52
AC008268.1-201ENST00000425887 POU2F2P09086 479 aa11.82□□□□□ -0.52
AC008268.1-201ENST00000425887 IVDP26440 423 aa11.82□□□□□ -0.52
AC008268.1-201ENST00000425887 KLRC2P26717 231 aa11.82□□□□□ -0.52
AC008268.1-201ENST00000425887 ALDH1A3P47895 512 aa11.82□□□□□ -0.52
AC008268.1-201ENST00000425887 PITX1P78337 314 aaPredicted RBP11.82□□□□□ -0.52
AC008268.1-201ENST00000425887 OTUD4Q01804 1114 aaKnown RBP11.82□□□□□ -0.52
AC008268.1-201ENST00000425887 NME3Q13232 169 aa11.82□□□□□ -0.52
AC008268.1-201ENST00000425887 VEPH1Q14D04 833 aa11.82□□□□□ -0.52
AC008268.1-201ENST00000425887 PAFAH1B3Q15102 231 aaKnown RBP11.82□□□□□ -0.52
AC008268.1-201ENST00000425887 PPP1R7Q15435 360 aa11.82□□□□□ -0.52
AC008268.1-201ENST00000425887 RAB6CQ53S08 254 aa11.82□□□□□ -0.52
AC008268.1-201ENST00000425887 ZC3H12AQ5D1E8 599 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms