RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 FSBPO95073 299 aa12.82□□□□□ -0.36
HLA-DQB3-203ENST00000425319 MOCS3O95396 460 aa12.82□□□□□ -0.36
HLA-DQB3-203ENST00000425319 ZBED1O96006 694 aa12.82□□□□□ -0.36
HLA-DQB3-203ENST00000425319 HNF1BP35680 557 aa12.82□□□□□ -0.36
HLA-DQB3-203ENST00000425319 NNMTP40261 264 aa12.82□□□□□ -0.36
HLA-DQB3-203ENST00000425319 GRIA4P48058 902 aa12.82□□□□□ -0.36
HLA-DQB3-203ENST00000425319 GCLMP48507 274 aa12.82□□□□□ -0.36
HLA-DQB3-203ENST00000425319 SLC11A2P49281 568 aa12.82□□□□□ -0.36
HLA-DQB3-203ENST00000425319 CCT8P50990 548 aa12.82□□□□□ -0.36
HLA-DQB3-203ENST00000425319 TKTL1P51854 596 aa12.82□□□□□ -0.36
HLA-DQB3-203ENST00000425319 FOXD4L6Q3SYB3 417 aaPredicted RBP12.82□□□□□ -0.36
HLA-DQB3-203ENST00000425319 CCDC157Q569K6 752 aa12.82□□□□□ -0.36
HLA-DQB3-203ENST00000425319 FOXD4L5Q5VV16 416 aaPredicted RBP12.82□□□□□ -0.36
HLA-DQB3-203ENST00000425319 FOXD4L3Q6VB84 417 aaPredicted RBP12.82□□□□□ -0.36
HLA-DQB3-203ENST00000425319 DBX2Q6ZNG2 339 aa12.82□□□□□ -0.36
HLA-DQB3-203ENST00000425319 CHST9Q7L1S5 443 aa12.82□□□□□ -0.36
HLA-DQB3-203ENST00000425319 GPRIN1Q7Z2K8 1008 aa12.82□□□□□ -0.36
HLA-DQB3-203ENST00000425319 SCD5Q86SK9 330 aa12.82□□□□□ -0.36
HLA-DQB3-203ENST00000425319 SLCO6A1Q86UG4 719 aa12.82□□□□□ -0.36
HLA-DQB3-203ENST00000425319 SIX6OS1Q8N1H7 587 aa12.82□□□□□ -0.36
HLA-DQB3-203ENST00000425319 ANKRD52Q8NB46 1076 aa12.82□□□□□ -0.36
HLA-DQB3-203ENST00000425319 FOXD4L4Q8WXT5 416 aaPredicted RBP12.82□□□□□ -0.36
HLA-DQB3-203ENST00000425319 IGSF8Q969P0 613 aa12.82□□□□□ -0.36
HLA-DQB3-203ENST00000425319 PAGE5Q96GU1 130 aa12.82□□□□□ -0.36
HLA-DQB3-203ENST00000425319 PIWIL1Q96J94 861 aaKnown RBP12.82□□□□□ -0.36
HLA-DQB3-203ENST00000425319 GZF1Q9H116 711 aaPredicted RBP12.82□□□□□ -0.36
HLA-DQB3-203ENST00000425319 ABCC13Q9NSE7 274 aa12.82□□□□□ -0.36
HLA-DQB3-203ENST00000425319 DKK4Q9UBT3 224 aa12.82□□□□□ -0.36
HLA-DQB3-203ENST00000425319 HMGXB4Q9UGU5 601 aa12.82□□□□□ -0.36
HLA-DQB3-203ENST00000425319 KIAA1257Q9ULG3 409 aa12.82□□□□□ -0.36
HLA-DQB3-203ENST00000425319 ANKRD6Q9Y2G4 727 aa12.82□□□□□ -0.36
HLA-DQB3-203ENST00000425319 OBSL1O75147 1896 aa12.82□□□□□ -0.36
HLA-DQB3-203ENST00000425319 TRABD2BA6NFA1 517 aa12.81□□□□□ -0.36
HLA-DQB3-203ENST00000425319 KCNJ18B7U540 433 aa12.81□□□□□ -0.36
HLA-DQB3-203ENST00000425319 RRP8O43159 456 aaKnown RBP12.81□□□□□ -0.36
HLA-DQB3-203ENST00000425319 CBFA2T3O75081 653 aa12.81□□□□□ -0.36
HLA-DQB3-203ENST00000425319 SEMA4FO95754 770 aa12.81□□□□□ -0.36
HLA-DQB3-203ENST00000425319 LATS1O95835 1130 aa12.81□□□□□ -0.36
HLA-DQB3-203ENST00000425319 KLKB1P03952 638 aa12.81□□□□□ -0.36
HLA-DQB3-203ENST00000425319 ZSCAN22P10073 491 aaPredicted RBP12.81□□□□□ -0.36
HLA-DQB3-203ENST00000425319 JUPP14923 745 aa12.81□□□□□ -0.36
HLA-DQB3-203ENST00000425319 CD27P26842 260 aa12.81□□□□□ -0.36
HLA-DQB3-203ENST00000425319 PGFP49763 221 aa12.81□□□□□ -0.36
HLA-DQB3-203ENST00000425319 NUCB2P80303 420 aa12.81□□□□□ -0.36
HLA-DQB3-203ENST00000425319 CAMK2GQ13555 558 aaPredicted RBP12.81□□□□□ -0.36
HLA-DQB3-203ENST00000425319 C6orf118Q5T5N4 469 aa12.81□□□□□ -0.36
HLA-DQB3-203ENST00000425319 ADGRF1Q5T601 910 aa12.81□□□□□ -0.36
HLA-DQB3-203ENST00000425319 TMPRSS12Q86WS5 348 aa12.81□□□□□ -0.36
HLA-DQB3-203ENST00000425319 HSCBQ8IWL3 235 aa12.81□□□□□ -0.36
HLA-DQB3-203ENST00000425319 MDM1Q8TC05 714 aa12.81□□□□□ -0.36
HLA-DQB3-203ENST00000425319 ELMO3Q96BJ8 720 aa12.81□□□□□ -0.36
HLA-DQB3-203ENST00000425319 LRIG1Q96JA1 1093 aa12.81□□□□□ -0.36
HLA-DQB3-203ENST00000425319 ARID3AQ99856 593 aa12.81□□□□□ -0.36
HLA-DQB3-203ENST00000425319 KCTD10Q9H3F6 313 aa12.81□□□□□ -0.36
HLA-DQB3-203ENST00000425319 RAB20Q9NX57 234 aa12.81□□□□□ -0.36
HLA-DQB3-203ENST00000425319 FTSJ1Q9UET6 329 aa12.81□□□□□ -0.36
HLA-DQB3-203ENST00000425319 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.81□□□□□ -0.36
HLA-DQB3-203ENST00000425319 ANAPC1Q9H1A4 1944 aa12.81□□□□□ -0.36
HLA-DQB3-203ENST00000425319 LRRC72A6NJI9 287 aa12.8□□□□□ -0.36
HLA-DQB3-203ENST00000425319 CETN3O15182 167 aa12.8□□□□□ -0.36
HLA-DQB3-203ENST00000425319 YKT6O15498 198 aa12.8□□□□□ -0.36
HLA-DQB3-203ENST00000425319 IRAK2O43187 625 aa12.8□□□□□ -0.36
HLA-DQB3-203ENST00000425319 PCDHGA12O60330 932 aa12.8□□□□□ -0.36
HLA-DQB3-203ENST00000425319 TSPAN3O60637 253 aa12.8□□□□□ -0.36
HLA-DQB3-203ENST00000425319 F13A1P00488 732 aa12.8□□□□□ -0.36
HLA-DQB3-203ENST00000425319 DLDP09622 509 aaKnown RBP12.8□□□□□ -0.36
HLA-DQB3-203ENST00000425319 C1SP09871 688 aa12.8□□□□□ -0.36
HLA-DQB3-203ENST00000425319 ATXN1LP0C7T5 689 aaKnown RBP12.8□□□□□ -0.36
HLA-DQB3-203ENST00000425319 EPB41P11171 864 aaKnown RBP12.8□□□□□ -0.36
HLA-DQB3-203ENST00000425319 HLA-EP13747 358 aa12.8□□□□□ -0.36
HLA-DQB3-203ENST00000425319 HOXB3P14651 431 aaPredicted RBP12.8□□□□□ -0.36
HLA-DQB3-203ENST00000425319 ABCB4P21439 1286 aa12.8□□□□□ -0.36
HLA-DQB3-203ENST00000425319 COPAP53621 1224 aa12.8□□□□□ -0.36
HLA-DQB3-203ENST00000425319 CYP4F3Q08477 520 aa12.8□□□□□ -0.36
HLA-DQB3-203ENST00000425319 TRIP4Q15650 581 aaPredicted RBP12.8□□□□□ -0.36
HLA-DQB3-203ENST00000425319 NFIL3Q16649 462 aa12.8□□□□□ -0.36
HLA-DQB3-203ENST00000425319 KIF19Q2TAC6 998 aa12.8□□□□□ -0.36
HLA-DQB3-203ENST00000425319 HS1BP3Q53T59 392 aa12.8□□□□□ -0.36
HLA-DQB3-203ENST00000425319 SGO2Q562F6 1265 aa12.8□□□□□ -0.36
HLA-DQB3-203ENST00000425319 MPP7Q5T2T1 576 aa12.8□□□□□ -0.36
HLA-DQB3-203ENST00000425319 ZNF776Q68DI1 518 aaPredicted RBP12.8□□□□□ -0.36
HLA-DQB3-203ENST00000425319 PIGZQ86VD9 579 aa12.8□□□□□ -0.36
HLA-DQB3-203ENST00000425319 CACUL1Q86Y37 369 aa12.8□□□□□ -0.36
HLA-DQB3-203ENST00000425319 FMNL3Q8IVF7 1028 aa12.8□□□□□ -0.36
HLA-DQB3-203ENST00000425319 SCUBE3Q8IX30 993 aa12.8□□□□□ -0.36
HLA-DQB3-203ENST00000425319 FBXL13Q8NEE6 735 aa12.8□□□□□ -0.36
HLA-DQB3-203ENST00000425319 IL21RQ9HBE5 538 aa12.8□□□□□ -0.36
HLA-DQB3-203ENST00000425319 CISHQ9NSE2 258 aa12.8□□□□□ -0.36
HLA-DQB3-203ENST00000425319 RAXQ9Y2V3 346 aa12.8□□□□□ -0.36
HLA-DQB3-203ENST00000425319 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.8□□□□□ -0.36
HLA-DQB3-203ENST00000425319 SNX11Q9Y5W9 270 aa12.8□□□□□ -0.36
HLA-DQB3-203ENST00000425319 FAM47DPA6NHR8 397 aa12.79□□□□□ -0.36
HLA-DQB3-203ENST00000425319 XPO1O14980 1071 aaKnown RBP12.79□□□□□ -0.36
HLA-DQB3-203ENST00000425319 MAGEC1O60732 1142 aa12.79□□□□□ -0.36
HLA-DQB3-203ENST00000425319 ASLP04424 464 aa12.79□□□□□ -0.36
HLA-DQB3-203ENST00000425319 ITGAVP06756 1048 aa12.79□□□□□ -0.36
HLA-DQB3-203ENST00000425319 PABPC1P11940 636 aaKnown RBP12.79□□□□□ -0.36
HLA-DQB3-203ENST00000425319 CD19P15391 556 aa12.79□□□□□ -0.36
HLA-DQB3-203ENST00000425319 CMA1P23946 247 aa12.79□□□□□ -0.36
HLA-DQB3-203ENST00000425319 PRKCHP24723 683 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms