RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 RAP1GAP2Q684P5 730 aa13.95□□□□□ -0.18
PRPF39-202ENST00000424478 ARCQ7LC44 396 aa13.95□□□□□ -0.18
PRPF39-202ENST00000424478 RSPRY1Q96DX4 576 aa13.95□□□□□ -0.18
PRPF39-202ENST00000424478 P2RY11Q96G91 374 aa13.95□□□□□ -0.18
PRPF39-202ENST00000424478 S1PR5Q9H228 398 aa13.95□□□□□ -0.18
PRPF39-202ENST00000424478 CFAP97Q9P2B7 532 aa13.95□□□□□ -0.18
PRPF39-202ENST00000424478 PCDHA3Q9Y5H8 950 aa13.95□□□□□ -0.18
PRPF39-202ENST00000424478 TSPAN3O60637 253 aa13.94□□□□□ -0.18
PRPF39-202ENST00000424478 STC2O76061 302 aa13.94□□□□□ -0.18
PRPF39-202ENST00000424478 GOT1P17174 413 aa13.94□□□□□ -0.18
PRPF39-202ENST00000424478 ADRA1BP35368 520 aa13.94□□□□□ -0.18
PRPF39-202ENST00000424478 EPHA5P54756 1037 aa13.94□□□□□ -0.18
PRPF39-202ENST00000424478 MRPS25P82663 173 aaKnown RBP13.94□□□□□ -0.18
PRPF39-202ENST00000424478 EIF4EBP2Q13542 120 aaPredicted RBP13.94□□□□□ -0.18
PRPF39-202ENST00000424478 PIK3R6Q5UE93 754 aa13.94□□□□□ -0.18
PRPF39-202ENST00000424478 MSANTD2Q6P1R3 559 aa13.94□□□□□ -0.18
PRPF39-202ENST00000424478 ARID3BQ8IVW6 561 aaPredicted RBP13.94□□□□□ -0.18
PRPF39-202ENST00000424478 NPAS3Q8IXF0 933 aa13.94□□□□□ -0.18
PRPF39-202ENST00000424478 CFAP52Q8N1V2 620 aa13.94□□□□□ -0.18
PRPF39-202ENST00000424478 KCTD6Q8NC69 237 aa13.94□□□□□ -0.18
PRPF39-202ENST00000424478 LRRN4CLQ8ND94 238 aa13.94□□□□□ -0.18
PRPF39-202ENST00000424478 ZSCAN18Q8TBC5 510 aaPredicted RBP13.94□□□□□ -0.18
PRPF39-202ENST00000424478 SERPINB11Q96P15 392 aa13.94□□□□□ -0.18
PRPF39-202ENST00000424478 MTMR10Q9NXD2 777 aa13.94□□□□□ -0.18
PRPF39-202ENST00000424478 SNX12Q9UMY4 172 aa13.94□□□□□ -0.18
PRPF39-202ENST00000424478 NR2E1Q9Y466 385 aa13.94□□□□□ -0.18
PRPF39-202ENST00000424478 FSHRP23945 695 aa13.94□□□□□ -0.18
PRPF39-202ENST00000424478 CORO1AP31146 461 aaKnown RBP13.94□□□□□ -0.18
PRPF39-202ENST00000424478 MAN1A1P33908 653 aa13.94□□□□□ -0.18
PRPF39-202ENST00000424478 AVPR1AP37288 418 aa13.94□□□□□ -0.18
PRPF39-202ENST00000424478 SLC1A1P43005 524 aa13.94□□□□□ -0.18
PRPF39-202ENST00000424478 SNX30Q5VWJ9 437 aa13.94□□□□□ -0.18
PRPF39-202ENST00000424478 CMTM8Q8IZV2 173 aa13.94□□□□□ -0.18
PRPF39-202ENST00000424478 USP13Q92995 863 aaPredicted RBP13.94□□□□□ -0.18
PRPF39-202ENST00000424478 ZFYVE19Q96K21 471 aa13.94□□□□□ -0.18
PRPF39-202ENST00000424478 COMMD8Q9NX08 183 aa13.94□□□□□ -0.18
PRPF39-202ENST00000424478 DPP7Q9UHL4 492 aa13.94□□□□□ -0.18
PRPF39-202ENST00000424478 VANGL2Q9ULK5 521 aa13.94□□□□□ -0.18
PRPF39-202ENST00000424478 FZD10Q9ULW2 581 aa13.94□□□□□ -0.18
PRPF39-202ENST00000424478 NUP205Q92621 2012 aa13.94□□□□□ -0.18
PRPF39-202ENST00000424478 TMEM265A0A087WTH1 108 aa13.93□□□□□ -0.18
PRPF39-202ENST00000424478 PDE2AO00408 941 aaPredicted RBP13.93□□□□□ -0.18
PRPF39-202ENST00000424478 ENDOD1O94919 500 aa13.93□□□□□ -0.18
PRPF39-202ENST00000424478 CCR1P32246 355 aa13.93□□□□□ -0.18
PRPF39-202ENST00000424478 SGSHP51688 502 aa13.93□□□□□ -0.18
PRPF39-202ENST00000424478 AMPD2Q01433 879 aa13.93□□□□□ -0.18
PRPF39-202ENST00000424478 HADHQ16836 314 aaKnown RBP13.93□□□□□ -0.18
PRPF39-202ENST00000424478 ERMARDQ5T6L9 678 aa13.93□□□□□ -0.18
PRPF39-202ENST00000424478 NADSYN1Q6IA69 706 aa13.93□□□□□ -0.18
PRPF39-202ENST00000424478 SND1Q7KZF4 910 aaKnown RBP eCLIP13.93□□□□□ -0.18
PRPF39-202ENST00000424478 TP53INP2Q8IXH6 220 aa13.93□□□□□ -0.18
PRPF39-202ENST00000424478 SLC39A13Q96H72 371 aa13.93□□□□□ -0.18
PRPF39-202ENST00000424478 MYADMQ96S97 322 aa13.93□□□□□ -0.18
PRPF39-202ENST00000424478 KLF16Q9BXK1 252 aaPredicted RBP13.93□□□□□ -0.18
PRPF39-202ENST00000424478 ETNK2Q9NVF9 386 aa13.93□□□□□ -0.18
PRPF39-202ENST00000424478 MPP6Q9NZW5 540 aa13.93□□□□□ -0.18
PRPF39-202ENST00000424478 TLR6Q9Y2C9 796 aa13.93□□□□□ -0.18
PRPF39-202ENST00000424478 TRAV19A0A0A6YYK7 116 aa13.93□□□□□ -0.18
PRPF39-202ENST00000424478 GBP1P32455 592 aa13.93□□□□□ -0.18
PRPF39-202ENST00000424478 PCK1P35558 622 aa13.93□□□□□ -0.18
PRPF39-202ENST00000424478 KRT81Q14533 505 aa13.93□□□□□ -0.18
PRPF39-202ENST00000424478 TMEM184AQ6ZMB5 413 aa13.93□□□□□ -0.18
PRPF39-202ENST00000424478 SH3RF2Q8TEC5 729 aa13.93□□□□□ -0.18
PRPF39-202ENST00000424478 HDAC7Q8WUI4 952 aa13.93□□□□□ -0.18
PRPF39-202ENST00000424478 OVCA2Q8WZ82 227 aa13.93□□□□□ -0.18
PRPF39-202ENST00000424478 CEP295NLQ96MC4 621 aa13.93□□□□□ -0.18
PRPF39-202ENST00000424478 AP1M1Q9BXS5 423 aa13.93□□□□□ -0.18
PRPF39-202ENST00000424478 DZANK1Q9NVP4 752 aa13.93□□□□□ -0.18
PRPF39-202ENST00000424478 PLK2Q9NYY3 685 aa13.93□□□□□ -0.18
PRPF39-202ENST00000424478 HS3ST4Q9Y661 456 aa13.93□□□□□ -0.18
PRPF39-202ENST00000424478 SLC6A4P31645 630 aa13.93□□□□□ -0.18
PRPF39-202ENST00000424478 RWDD2BP57060 319 aa13.93□□□□□ -0.18
PRPF39-202ENST00000424478 TRIP4Q15650 581 aaPredicted RBP13.93□□□□□ -0.18
PRPF39-202ENST00000424478 ZDHHC14Q8IZN3 488 aa13.93□□□□□ -0.18
PRPF39-202ENST00000424478 KIF18AQ8NI77 898 aa13.93□□□□□ -0.18
PRPF39-202ENST00000424478 PABPC5Q96DU9 382 aaKnown RBP13.93□□□□□ -0.18
PRPF39-202ENST00000424478 MSLNLQ96KJ4 702 aa13.93□□□□□ -0.18
PRPF39-202ENST00000424478 C10orf88Q9H8K7 445 aa13.93□□□□□ -0.18
PRPF39-202ENST00000424478 PCDH18Q9HCL0 1135 aa13.93□□□□□ -0.18
PRPF39-202ENST00000424478 LMCD1Q9NZU5 365 aa13.93□□□□□ -0.18
PRPF39-202ENST00000424478 USP15Q9Y4E8 981 aaPredicted RBP13.93□□□□□ -0.18
PRPF39-202ENST00000424478 SAR1BQ9Y6B6 198 aa13.93□□□□□ -0.18
PRPF39-202ENST00000424478 CLUHO75153 1309 aa13.92□□□□□ -0.18
PRPF39-202ENST00000424478 C3orf70A6NLC5 250 aaPredicted RBP13.92□□□□□ -0.18
PRPF39-202ENST00000424478 LEFTY2O00292 366 aa13.92□□□□□ -0.18
PRPF39-202ENST00000424478 L1CAMP32004 1257 aa13.92□□□□□ -0.18
PRPF39-202ENST00000424478 GBP2P32456 591 aaPredicted RBP13.92□□□□□ -0.18
PRPF39-202ENST00000424478 ODF2Q5BJF6 829 aa13.92□□□□□ -0.18
PRPF39-202ENST00000424478 FAM78AQ5JUQ0 283 aa13.92□□□□□ -0.18
PRPF39-202ENST00000424478 CES5AQ6NT32 575 aa13.92□□□□□ -0.18
PRPF39-202ENST00000424478 RWDD4Q6NW29 188 aaKnown RBP13.92□□□□□ -0.18
PRPF39-202ENST00000424478 ELMSAN1Q6PJG2 1045 aa13.92□□□□□ -0.18
PRPF39-202ENST00000424478 NPNTQ6UXI9 565 aa13.92□□□□□ -0.18
PRPF39-202ENST00000424478 BBS7Q8IWZ6 715 aa13.92□□□□□ -0.18
PRPF39-202ENST00000424478 UBL4BQ8N7F7 174 aa13.92□□□□□ -0.18
PRPF39-202ENST00000424478 TTC8Q8TAM2 541 aa13.92□□□□□ -0.18
PRPF39-202ENST00000424478 RPP25Q9BUL9 199 aaKnown RBP13.92□□□□□ -0.18
PRPF39-202ENST00000424478 CWC15Q9P013 229 aaKnown RBP13.92□□□□□ -0.18
PRPF39-202ENST00000424478 OR12D3Q9UGF7 316 aa13.92□□□□□ -0.18
PRPF39-202ENST00000424478 CCDC66A2RUB6 948 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms