RNA–Protein interactions for RNA: ENST00000424225.1

TOP2B-203, Transcript of DNA topoisomerase II beta, humanhuman

TSL 1 (best)

Gene TOP2B, Length 3,525 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-203ENST00000424225 NDST2P52849 883 aa13.31□□□□□ -0.28
TOP2B-203ENST00000424225 PKNOX1P55347 436 aa13.31□□□□□ -0.28
TOP2B-203ENST00000424225 IRF9Q00978 393 aa13.31□□□□□ -0.28
TOP2B-203ENST00000424225 CES3Q6UWW8 571 aa13.31□□□□□ -0.28
TOP2B-203ENST00000424225 RFX6Q8HWS3 928 aa13.31□□□□□ -0.28
TOP2B-203ENST00000424225 ARHGAP18Q8N392 663 aa13.31□□□□□ -0.28
TOP2B-203ENST00000424225 TMEM151AQ8N4L1 468 aa13.31□□□□□ -0.28
TOP2B-203ENST00000424225 HMGCLL1Q8TB92 370 aa13.31□□□□□ -0.28
TOP2B-203ENST00000424225 ARNTL2Q8WYA1 636 aa13.31□□□□□ -0.28
TOP2B-203ENST00000424225 CLMNQ96JQ2 1002 aa13.31□□□□□ -0.28
TOP2B-203ENST00000424225 MARK4Q96L34 752 aa13.31□□□□□ -0.28
TOP2B-203ENST00000424225 CCDC28BQ9BUN5 200 aa13.31□□□□□ -0.28
TOP2B-203ENST00000424225 CALN1Q9BXU9 219 aa13.31□□□□□ -0.28
TOP2B-203ENST00000424225 IMPG2Q9BZV3 1241 aa13.31□□□□□ -0.28
TOP2B-203ENST00000424225 CXCL16Q9H2A7 254 aa13.31□□□□□ -0.28
TOP2B-203ENST00000424225 WDR55Q9H6Y2 383 aaPredicted RBP13.31□□□□□ -0.28
TOP2B-203ENST00000424225 COPS7BQ9H9Q2 264 aaPredicted RBP13.31□□□□□ -0.28
TOP2B-203ENST00000424225 PRDM16Q9HAZ2 1276 aa13.31□□□□□ -0.28
TOP2B-203ENST00000424225 ZNF180Q9UJW8 692 aa13.31□□□□□ -0.28
TOP2B-203ENST00000424225 AGTPBP1Q9UPW5 1226 aa13.31□□□□□ -0.28
TOP2B-203ENST00000424225 GNEQ9Y223 722 aaKnown RBP13.31□□□□□ -0.28
TOP2B-203ENST00000424225 MRPL11Q9Y3B7 192 aaKnown RBP13.31□□□□□ -0.28
TOP2B-203ENST00000424225 APOEP02649 317 aa13.3□□□□□ -0.28
TOP2B-203ENST00000424225 PDGFRBP09619 1106 aa13.3□□□□□ -0.28
TOP2B-203ENST00000424225 SBK3P0C264 359 aa13.3□□□□□ -0.28
TOP2B-203ENST00000424225 THRAP10827 490 aa13.3□□□□□ -0.28
TOP2B-203ENST00000424225 DLG2Q15700 870 aa13.3□□□□□ -0.28
TOP2B-203ENST00000424225 PCGF5Q86SE9 256 aa13.3□□□□□ -0.28
TOP2B-203ENST00000424225 WDR75Q8IWA0 830 aaKnown RBP13.3□□□□□ -0.28
TOP2B-203ENST00000424225 TP53INP2Q8IXH6 220 aa13.3□□□□□ -0.28
TOP2B-203ENST00000424225 PCDH19Q8TAB3 1148 aa13.3□□□□□ -0.28
TOP2B-203ENST00000424225 ZNF232Q9UNY5 417 aa13.3□□□□□ -0.28
TOP2B-203ENST00000424225 PLIN3O60664 434 aa13.3□□□□□ -0.28
TOP2B-203ENST00000424225 LTFP02788 710 aa13.3□□□□□ -0.28
TOP2B-203ENST00000424225 CDH15P55291 814 aa13.3□□□□□ -0.28
TOP2B-203ENST00000424225 PFKPQ01813 784 aa13.3□□□□□ -0.28
TOP2B-203ENST00000424225 PIGHQ14442 188 aaPredicted RBP13.3□□□□□ -0.28
TOP2B-203ENST00000424225 GRAMD1BQ3KR37 738 aa13.3□□□□□ -0.28
TOP2B-203ENST00000424225 PDPK2PQ6A1A2 396 aa13.3□□□□□ -0.28
TOP2B-203ENST00000424225 B3GNT6Q6ZMB0 384 aa13.3□□□□□ -0.28
TOP2B-203ENST00000424225 KRT27Q7Z3Y8 459 aa13.3□□□□□ -0.28
TOP2B-203ENST00000424225 CMC1Q7Z7K0 106 aa13.3□□□□□ -0.28
TOP2B-203ENST00000424225 TANKQ92844 425 aa13.3□□□□□ -0.28
TOP2B-203ENST00000424225 SLCO4A1Q96BD0 722 aa13.3□□□□□ -0.28
TOP2B-203ENST00000424225 FAF2Q96CS3 445 aa13.3□□□□□ -0.28
TOP2B-203ENST00000424225 PDCD2LQ9BRP1 358 aa13.3□□□□□ -0.28
TOP2B-203ENST00000424225 COG4Q9H9E3 785 aa13.3□□□□□ -0.28
TOP2B-203ENST00000424225 THAP1Q9NVV9 213 aa13.3□□□□□ -0.28
TOP2B-203ENST00000424225 CHRNGP07510 517 aa13.3□□□□□ -0.28
TOP2B-203ENST00000424225 APRTP07741 180 aa13.3□□□□□ -0.28
TOP2B-203ENST00000424225 CD247P20963 164 aa13.3□□□□□ -0.28
TOP2B-203ENST00000424225 COPAP53621 1224 aa13.3□□□□□ -0.28
TOP2B-203ENST00000424225 PQLC1Q8N2U9 271 aa13.3□□□□□ -0.28
TOP2B-203ENST00000424225 USP13Q92995 863 aaPredicted RBP13.3□□□□□ -0.28
TOP2B-203ENST00000424225 SLC29A1Q99808 456 aa13.3□□□□□ -0.28
TOP2B-203ENST00000424225 VCX3BQ9H321 246 aa13.3□□□□□ -0.28
TOP2B-203ENST00000424225 VCX3AQ9NNX9 186 aa13.3□□□□□ -0.28
TOP2B-203ENST00000424225 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.3□□□□□ -0.28
TOP2B-203ENST00000424225 USP18Q9UMW8 372 aa13.3□□□□□ -0.28
TOP2B-203ENST00000424225 NME7Q9Y5B8 376 aa13.3□□□□□ -0.28
TOP2B-203ENST00000424225 GOLGA8QA0A0J9YX86 632 aa13.29□□□□□ -0.28
TOP2B-203ENST00000424225 SMIM31A0A1B0GVY4 71 aa13.29□□□□□ -0.28
TOP2B-203ENST00000424225 TESPA1A2RU30 521 aaPredicted RBP13.29□□□□□ -0.28
TOP2B-203ENST00000424225 GOLGA8OA6NCC3 632 aa13.29□□□□□ -0.28
TOP2B-203ENST00000424225 GOLGA8NF8WBI6 632 aa13.29□□□□□ -0.28
TOP2B-203ENST00000424225 ATP2A1O14983 1001 aa13.29□□□□□ -0.28
TOP2B-203ENST00000424225 KCNN4O15554 427 aa13.29□□□□□ -0.28
TOP2B-203ENST00000424225 CIB2O75838 187 aa13.29□□□□□ -0.28
TOP2B-203ENST00000424225 CLPTM1O96005 669 aa13.29□□□□□ -0.28
TOP2B-203ENST00000424225 KRT3P12035 628 aa13.29□□□□□ -0.28
TOP2B-203ENST00000424225 RPL5P46777 297 aaKnown RBP13.29□□□□□ -0.28
TOP2B-203ENST00000424225 NUMBP49757 651 aa13.29□□□□□ -0.28
TOP2B-203ENST00000424225 NIPAL4Q0D2K0 466 aa13.29□□□□□ -0.28
TOP2B-203ENST00000424225 WDR44Q5JSH3 913 aa13.29□□□□□ -0.28
TOP2B-203ENST00000424225 MAP1SQ66K74 1059 aaPredicted RBP13.29□□□□□ -0.28
TOP2B-203ENST00000424225 CXorf38Q8TB03 319 aa13.29□□□□□ -0.28
TOP2B-203ENST00000424225 ANKEF1Q9NU02 776 aa13.29□□□□□ -0.28
TOP2B-203ENST00000424225 ITGA11Q9UKX5 1188 aa13.29□□□□□ -0.28
TOP2B-203ENST00000424225 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.29□□□□□ -0.28
TOP2B-203ENST00000424225 DGKIO75912 1065 aa13.29□□□□□ -0.28
TOP2B-203ENST00000424225 PFKMP08237 780 aa13.29□□□□□ -0.28
TOP2B-203ENST00000424225 COX4I1P13073 169 aa13.29□□□□□ -0.28
TOP2B-203ENST00000424225 SERPINB6P35237 376 aa13.29□□□□□ -0.28
TOP2B-203ENST00000424225 GHRHRQ02643 423 aa13.29□□□□□ -0.28
TOP2B-203ENST00000424225 PRKG1Q13976 671 aa13.29□□□□□ -0.28
TOP2B-203ENST00000424225 STYK1Q6J9G0 422 aa13.29□□□□□ -0.28
TOP2B-203ENST00000424225 CRLF3Q8IUI8 442 aa13.29□□□□□ -0.28
TOP2B-203ENST00000424225 GALNT4Q8N4A0 578 aa13.29□□□□□ -0.28
TOP2B-203ENST00000424225 LZTR1Q8N653 840 aa13.29□□□□□ -0.28
TOP2B-203ENST00000424225 KCTD6Q8NC69 237 aa13.29□□□□□ -0.28
TOP2B-203ENST00000424225 DTNBP1Q96EV8 351 aa13.29□□□□□ -0.28
TOP2B-203ENST00000424225 ZNF668Q96K58 619 aaPredicted RBP13.29□□□□□ -0.28
TOP2B-203ENST00000424225 NLRP4Q96MN2 994 aa13.29□□□□□ -0.28
TOP2B-203ENST00000424225 CGRRF1Q99675 332 aa13.29□□□□□ -0.28
TOP2B-203ENST00000424225 LPIN3Q9BQK8 851 aa13.29□□□□□ -0.28
TOP2B-203ENST00000424225 PXMP2Q9NR77 195 aa13.29□□□□□ -0.28
TOP2B-203ENST00000424225 EBF1Q9UH73 591 aa13.29□□□□□ -0.28
TOP2B-203ENST00000424225 TMEM221A6NGB7 291 aa13.29□□□□□ -0.28
TOP2B-203ENST00000424225 G3V2L1 256 aa13.29□□□□□ -0.28
TOP2B-203ENST00000424225 DLGAP1O14490 977 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms