RNA–Protein interactions for RNA: ENST00000423653.5

CCDC78-203, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC78, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-203ENST00000423653 HOXD9P28356 352 aaPredicted RBP17.5■□□□□ 0.39
CCDC78-203ENST00000423653 SLC11A2P49281 568 aa17.5■□□□□ 0.39
CCDC78-203ENST00000423653 IRX4P78413 519 aa17.5■□□□□ 0.39
CCDC78-203ENST00000423653 ENPP2Q13822 863 aa17.5■□□□□ 0.39
CCDC78-203ENST00000423653 WFIKKN2Q8TEU8 576 aa17.5■□□□□ 0.39
CCDC78-203ENST00000423653 P2RY11Q96G91 374 aa17.5■□□□□ 0.39
CCDC78-203ENST00000423653 IRX2Q9BZI1 471 aaPredicted RBP17.5■□□□□ 0.39
CCDC78-203ENST00000423653 ELOVL2Q9NXB9 296 aa17.5■□□□□ 0.39
CCDC78-203ENST00000423653 KIAA1468Q9P260 1216 aa17.5■□□□□ 0.39
CCDC78-203ENST00000423653 RWDD2AQ9UIY3 292 aa17.5■□□□□ 0.39
CCDC78-203ENST00000423653 PILRBQ9UKJ0 227 aa17.5■□□□□ 0.39
CCDC78-203ENST00000423653 LAMA1P25391 3075 aa17.5■□□□□ 0.39
CCDC78-203ENST00000423653 TYW5A2RUC4 315 aaKnown RBP17.49■□□□□ 0.39
CCDC78-203ENST00000423653 RNF225M0QZC1 329 aaPredicted RBP17.49■□□□□ 0.39
CCDC78-203ENST00000423653 IRAK2O43187 625 aa17.49■□□□□ 0.39
CCDC78-203ENST00000423653 IGLV3-27P01718 113 aa17.49■□□□□ 0.39
CCDC78-203ENST00000423653 CFIP05156 583 aa17.49■□□□□ 0.39
CCDC78-203ENST00000423653 ITPKAP23677 461 aa17.49■□□□□ 0.39
CCDC78-203ENST00000423653 IL12RB1P42701 662 aa17.49■□□□□ 0.39
CCDC78-203ENST00000423653 ACADSBP45954 432 aa17.49■□□□□ 0.39
CCDC78-203ENST00000423653 RING1Q06587 406 aa17.49■□□□□ 0.39
CCDC78-203ENST00000423653 ZNF33AQ06730 810 aa17.49■□□□□ 0.39
CCDC78-203ENST00000423653 ZNF234Q14588 700 aa17.49■□□□□ 0.39
CCDC78-203ENST00000423653 DUOXA1Q1HG43 343 aa17.49■□□□□ 0.39
CCDC78-203ENST00000423653 FUT11Q495W5 492 aa17.49■□□□□ 0.39
CCDC78-203ENST00000423653 SLC23A3Q6PIS1 610 aa17.49■□□□□ 0.39
CCDC78-203ENST00000423653 SERPINA13PQ6UXR4 307 aa17.49■□□□□ 0.39
CCDC78-203ENST00000423653 FAM149B1Q96BN6 582 aa17.49■□□□□ 0.39
CCDC78-203ENST00000423653 ERLEC1Q96DZ1 483 aa17.49■□□□□ 0.39
CCDC78-203ENST00000423653 TMA16Q96EY4 203 aaKnown RBP17.49■□□□□ 0.39
CCDC78-203ENST00000423653 HSPA12BQ96MM6 686 aa17.49■□□□□ 0.39
CCDC78-203ENST00000423653 KREMEN1Q96MU8 473 aa17.49■□□□□ 0.39
CCDC78-203ENST00000423653 SERPINB11Q96P15 392 aa17.49■□□□□ 0.39
CCDC78-203ENST00000423653 ZSWIM1Q9BR11 485 aa17.49■□□□□ 0.39
CCDC78-203ENST00000423653 PRDM16Q9HAZ2 1276 aa17.49■□□□□ 0.39
CCDC78-203ENST00000423653 ST7Q9NRC1 585 aa17.49■□□□□ 0.39
CCDC78-203ENST00000423653 CNTN6Q9UQ52 1028 aa17.49■□□□□ 0.39
CCDC78-203ENST00000423653 CEP192Q8TEP8 1941 aa17.49■□□□□ 0.39
CCDC78-203ENST00000423653 WASH3PC4AMC7 463 aa17.48■□□□□ 0.39
CCDC78-203ENST00000423653 PIK3R2O00459 728 aa17.48■□□□□ 0.39
CCDC78-203ENST00000423653 TSPAN3O60637 253 aa17.48■□□□□ 0.39
CCDC78-203ENST00000423653 KCNK5O95279 499 aa17.48■□□□□ 0.39
CCDC78-203ENST00000423653 NOVA1P51513 510 aaKnown RBP17.48■□□□□ 0.39
CCDC78-203ENST00000423653 ATXN3P54252 364 aaPredicted RBP17.48■□□□□ 0.39
CCDC78-203ENST00000423653 NNTQ13423 1086 aa17.48■□□□□ 0.39
CCDC78-203ENST00000423653 MPP7Q5T2T1 576 aa17.48■□□□□ 0.39
CCDC78-203ENST00000423653 SYCP2LQ5T4T6 812 aa17.48■□□□□ 0.39
CCDC78-203ENST00000423653 PSAPL1Q6NUJ1 521 aa17.48■□□□□ 0.39
CCDC78-203ENST00000423653 METTL3Q86U44 580 aaKnown RBP17.48■□□□□ 0.39
CCDC78-203ENST00000423653 AHI1Q8N157 1196 aa17.48■□□□□ 0.39
CCDC78-203ENST00000423653 FOXJ1Q92949 421 aa17.48■□□□□ 0.39
CCDC78-203ENST00000423653 DDX50Q9BQ39 737 aaKnown RBP17.48■□□□□ 0.39
CCDC78-203ENST00000423653 MIS12Q9H081 205 aa17.48■□□□□ 0.39
CCDC78-203ENST00000423653 UBE2TQ9NPD8 197 aaPredicted RBP17.48■□□□□ 0.39
CCDC78-203ENST00000423653 SUSD2Q9UGT4 822 aa17.48■□□□□ 0.39
CCDC78-203ENST00000423653 CKAP5Q14008 2032 aa17.48■□□□□ 0.39
CCDC78-203ENST00000423653 CNOT1A5YKK6 2376 aaKnown RBP17.47■□□□□ 0.39
CCDC78-203ENST00000423653 CDX4O14627 284 aaPredicted RBP17.47■□□□□ 0.39
CCDC78-203ENST00000423653 NCAM1P13591 858 aa17.47■□□□□ 0.39
CCDC78-203ENST00000423653 ENGP17813 658 aa17.47■□□□□ 0.39
CCDC78-203ENST00000423653 CD6P30203 668 aa17.47■□□□□ 0.39
CCDC78-203ENST00000423653 HLA-FP30511 346 aa17.47■□□□□ 0.39
CCDC78-203ENST00000423653 GNA15P30679 374 aa17.47■□□□□ 0.39
CCDC78-203ENST00000423653 TBX4P57082 545 aa17.47■□□□□ 0.39
CCDC78-203ENST00000423653 GFPT1Q06210 699 aaPredicted RBP17.47■□□□□ 0.39
CCDC78-203ENST00000423653 CAMK4Q16566 473 aa17.47■□□□□ 0.39
CCDC78-203ENST00000423653 TRIM65Q6PJ69 517 aa17.47■□□□□ 0.39
CCDC78-203ENST00000423653 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.47■□□□□ 0.39
CCDC78-203ENST00000423653 CLEC4CQ8WTT0 213 aa17.47■□□□□ 0.39
CCDC78-203ENST00000423653 STK32AQ8WU08 396 aa17.47■□□□□ 0.39
CCDC78-203ENST00000423653 PRCCQ92733 491 aaPredicted RBP17.47■□□□□ 0.39
CCDC78-203ENST00000423653 CNTNAP3BQ96NU0 1288 aa17.47■□□□□ 0.39
CCDC78-203ENST00000423653 CNTNAP3Q9BZ76 1288 aa17.47■□□□□ 0.39
CCDC78-203ENST00000423653 SLC6A17Q9H1V8 727 aa17.47■□□□□ 0.39
CCDC78-203ENST00000423653 TMEM74BQ9NUR3 256 aa17.47■□□□□ 0.39
CCDC78-203ENST00000423653 USP36Q9P275 1121 aaKnown RBP17.47■□□□□ 0.39
CCDC78-203ENST00000423653 GGA2Q9UJY4 613 aa17.47■□□□□ 0.39
CCDC78-203ENST00000423653 ANGPTL2Q9UKU9 493 aa17.47■□□□□ 0.39
CCDC78-203ENST00000423653 CLEC4EQ9ULY5 219 aa17.47■□□□□ 0.39
CCDC78-203ENST00000423653 SLC6A14Q9UN76 642 aa17.47■□□□□ 0.39
CCDC78-203ENST00000423653 MUC22E2RYF6 1773 aaPredicted RBP17.46■□□□□ 0.39
CCDC78-203ENST00000423653 THAP12O43422 761 aa17.46■□□□□ 0.39
CCDC78-203ENST00000423653 GABBR2O75899 941 aa17.46■□□□□ 0.39
CCDC78-203ENST00000423653 LETM1O95202 739 aaPredicted RBP17.46■□□□□ 0.39
CCDC78-203ENST00000423653 CALCAP01258 141 aa17.46■□□□□ 0.39
CCDC78-203ENST00000423653 EPHX1P07099 455 aa17.46■□□□□ 0.39
CCDC78-203ENST00000423653 SERPINF2P08697 491 aa17.46■□□□□ 0.39
CCDC78-203ENST00000423653 ACADMP11310 421 aa17.46■□□□□ 0.39
CCDC78-203ENST00000423653 PABPC1P11940 636 aaKnown RBP17.46■□□□□ 0.39
CCDC78-203ENST00000423653 CSRP1P21291 193 aaKnown RBP17.46■□□□□ 0.39
CCDC78-203ENST00000423653 PRKCHP24723 683 aa17.46■□□□□ 0.39
CCDC78-203ENST00000423653 GPD2P43304 727 aa17.46■□□□□ 0.39
CCDC78-203ENST00000423653 MAPK8P45983 427 aa17.46■□□□□ 0.39
CCDC78-203ENST00000423653 TPD52L1Q16890 204 aaPredicted RBP17.46■□□□□ 0.39
CCDC78-203ENST00000423653 UAP1L1Q3KQV9 507 aa17.46■□□□□ 0.39
CCDC78-203ENST00000423653 FNDC3BQ53EP0 1204 aaKnown RBP17.46■□□□□ 0.39
CCDC78-203ENST00000423653 WDR45BQ5MNZ6 344 aa17.46■□□□□ 0.39
CCDC78-203ENST00000423653 N4BP2L1Q5TBK1 243 aaPredicted RBP17.46■□□□□ 0.39
CCDC78-203ENST00000423653 GBP6Q6ZN66 633 aa17.46■□□□□ 0.39
CCDC78-203ENST00000423653 TMPRSS6Q8IU80 811 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms