RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 FERP16591 822 aa10.06□□□□□ -0.8
HERC3-204ENST00000422770 GBP1P32455 592 aa10.06□□□□□ -0.8
HERC3-204ENST00000422770 NSFP46459 744 aaKnown RBP10.06□□□□□ -0.8
HERC3-204ENST00000422770 RPL34P49207 117 aaKnown RBP10.06□□□□□ -0.8
HERC3-204ENST00000422770 DGKGP49619 791 aa10.06□□□□□ -0.8
HERC3-204ENST00000422770 SULT1E1P49888 294 aa10.06□□□□□ -0.8
HERC3-204ENST00000422770 NOMO3P69849 1222 aa10.06□□□□□ -0.8
HERC3-204ENST00000422770 SLC6A3Q01959 620 aa10.06□□□□□ -0.8
HERC3-204ENST00000422770 GAB4Q2WGN9 574 aa10.06□□□□□ -0.8
HERC3-204ENST00000422770 ZC3H12AQ5D1E8 599 aaKnown RBP10.06□□□□□ -0.8
HERC3-204ENST00000422770 PKN3Q6P5Z2 889 aa10.06□□□□□ -0.8
HERC3-204ENST00000422770 RFWD3Q6PCD5 774 aa10.06□□□□□ -0.8
HERC3-204ENST00000422770 ZC3H14Q6PJT7 736 aaKnown RBP10.06□□□□□ -0.8
HERC3-204ENST00000422770 SFTPA1Q8IWL2 248 aa10.06□□□□□ -0.8
HERC3-204ENST00000422770 ZNF687Q8N1G0 1237 aa10.06□□□□□ -0.8
HERC3-204ENST00000422770 SYNPOQ8N3V7 929 aa10.06□□□□□ -0.8
HERC3-204ENST00000422770 CCDC26Q8TAB7 109 aa10.06□□□□□ -0.8
HERC3-204ENST00000422770 ATRIPQ8WXE1 791 aa10.06□□□□□ -0.8
HERC3-204ENST00000422770 DDX1Q92499 740 aaKnown RBP10.06□□□□□ -0.8
HERC3-204ENST00000422770 ACDQ96AP0 544 aa10.06□□□□□ -0.8
HERC3-204ENST00000422770 C18orf8Q96DM3 657 aa10.06□□□□□ -0.8
HERC3-204ENST00000422770 ERLEC1Q96DZ1 483 aa10.06□□□□□ -0.8
HERC3-204ENST00000422770 PHOX2BQ99453 314 aa10.06□□□□□ -0.8
HERC3-204ENST00000422770 DNAJC7Q99615 494 aa10.06□□□□□ -0.8
HERC3-204ENST00000422770 EDEM3Q9BZQ6 932 aa10.06□□□□□ -0.8
HERC3-204ENST00000422770 NUCKS1Q9H1E3 243 aaKnown RBP10.06□□□□□ -0.8
HERC3-204ENST00000422770 KCNF1Q9H3M0 494 aa10.06□□□□□ -0.8
HERC3-204ENST00000422770 POLR3BQ9NW08 1133 aaPredicted RBP10.06□□□□□ -0.8
HERC3-204ENST00000422770 STIM2Q9P246 746 aa10.06□□□□□ -0.8
HERC3-204ENST00000422770 NOCTQ9UK39 431 aaKnown RBP10.06□□□□□ -0.8
HERC3-204ENST00000422770 TLR6Q9Y2C9 796 aa10.06□□□□□ -0.8
HERC3-204ENST00000422770 EML5Q05BV3 1969 aa10.05□□□□□ -0.8
HERC3-204ENST00000422770 GOLGA6L7A0A1B0GV03 622 aa10.05□□□□□ -0.8
HERC3-204ENST00000422770 TMCO5BA8MYB1 307 aa10.05□□□□□ -0.8
HERC3-204ENST00000422770 M0QYT0 321 aa10.05□□□□□ -0.8
HERC3-204ENST00000422770 CACNG3O60359 315 aa10.05□□□□□ -0.8
HERC3-204ENST00000422770 KLF8O95600 359 aaPredicted RBP10.05□□□□□ -0.8
HERC3-204ENST00000422770 FYNP06241 537 aa10.05□□□□□ -0.8
HERC3-204ENST00000422770 CHRNB2P17787 502 aa10.05□□□□□ -0.8
HERC3-204ENST00000422770 ABCB4P21439 1286 aa10.05□□□□□ -0.8
HERC3-204ENST00000422770 TNFAIP3P21580 790 aa10.05□□□□□ -0.8
HERC3-204ENST00000422770 EIF2DP41214 584 aaKnown RBP10.05□□□□□ -0.8
HERC3-204ENST00000422770 GRIA2P42262 883 aa10.05□□□□□ -0.8
HERC3-204ENST00000422770 PXNP49023 591 aaPredicted RBP10.05□□□□□ -0.8
HERC3-204ENST00000422770 PITX1P78337 314 aaPredicted RBP10.05□□□□□ -0.8
HERC3-204ENST00000422770 CCZ1BP86790 482 aa10.05□□□□□ -0.8
HERC3-204ENST00000422770 CCZ1P86791 482 aaPredicted RBP10.05□□□□□ -0.8
HERC3-204ENST00000422770 FMO1Q01740 532 aa10.05□□□□□ -0.8
HERC3-204ENST00000422770 MESP2Q0VG99 397 aa10.05□□□□□ -0.8
HERC3-204ENST00000422770 GAS6Q14393 721 aa10.05□□□□□ -0.8
HERC3-204ENST00000422770 MPPE1Q53F39 396 aa10.05□□□□□ -0.8
HERC3-204ENST00000422770 SMYD5Q6GMV2 418 aa10.05□□□□□ -0.8
HERC3-204ENST00000422770 OLFML1Q6UWY5 402 aa10.05□□□□□ -0.8
HERC3-204ENST00000422770 TRIM72Q6ZMU5 477 aa10.05□□□□□ -0.8
HERC3-204ENST00000422770 SND1Q7KZF4 910 aaKnown RBP eCLIP10.05□□□□□ -0.8
HERC3-204ENST00000422770 CHSY1Q86X52 802 aa10.05□□□□□ -0.8
HERC3-204ENST00000422770 XYLT1Q86Y38 959 aa10.05□□□□□ -0.8
HERC3-204ENST00000422770 ZDHHC17Q8IUH5 632 aa10.05□□□□□ -0.8
HERC3-204ENST00000422770 CCDC117Q8IWD4 279 aaPredicted RBP10.05□□□□□ -0.8
HERC3-204ENST00000422770 ALLCQ8N6M5 410 aa10.05□□□□□ -0.8
HERC3-204ENST00000422770 ATP6V0D2Q8N8Y2 350 aa10.05□□□□□ -0.8
HERC3-204ENST00000422770 TERB1Q8NA31 727 aa10.05□□□□□ -0.8
HERC3-204ENST00000422770 CCDC112Q8NEF3 446 aa10.05□□□□□ -0.8
HERC3-204ENST00000422770 OR8K1Q8NGG5 319 aa10.05□□□□□ -0.8
HERC3-204ENST00000422770 TMA16Q96EY4 203 aaKnown RBP10.05□□□□□ -0.8
HERC3-204ENST00000422770 HHIPQ96QV1 700 aa10.05□□□□□ -0.8
HERC3-204ENST00000422770 PANX2Q96RD6 677 aa10.05□□□□□ -0.8
HERC3-204ENST00000422770 BAG1Q99933 345 aaPredicted RBP10.05□□□□□ -0.8
HERC3-204ENST00000422770 AGPAT1Q99943 283 aa10.05□□□□□ -0.8
HERC3-204ENST00000422770 DDX50Q9BQ39 737 aaKnown RBP10.05□□□□□ -0.8
HERC3-204ENST00000422770 HINFPQ9BQA5 517 aa10.05□□□□□ -0.8
HERC3-204ENST00000422770 DEF6Q9H4E7 631 aa10.05□□□□□ -0.8
HERC3-204ENST00000422770 METTL5Q9NRN9 209 aaKnown RBP10.05□□□□□ -0.8
HERC3-204ENST00000422770 C2orf42Q9NWW7 574 aa10.05□□□□□ -0.8
HERC3-204ENST00000422770 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.05□□□□□ -0.8
HERC3-204ENST00000422770 SLC12A6Q9UHW9 1150 aa10.05□□□□□ -0.8
HERC3-204ENST00000422770 FBXO4Q9UKT5 387 aa10.05□□□□□ -0.8
HERC3-204ENST00000422770 STAP1Q9ULZ2 295 aa10.05□□□□□ -0.8
HERC3-204ENST00000422770 MYO6Q9UM54 1294 aa10.05□□□□□ -0.8
HERC3-204ENST00000422770 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.05□□□□□ -0.8
HERC3-204ENST00000422770 MYO18AQ92614 2054 aaKnown RBP10.04□□□□□ -0.8
HERC3-204ENST00000422770 ANTXRLA6NF34 631 aa10.04□□□□□ -0.8
HERC3-204ENST00000422770 SOWAHDA6NJG2 315 aa10.04□□□□□ -0.8
HERC3-204ENST00000422770 CHURC1-FNTBB4DL54 471 aa10.04□□□□□ -0.8
HERC3-204ENST00000422770 K7EQS6 105 aa10.04□□□□□ -0.8
HERC3-204ENST00000422770 IRAK2O43187 625 aa10.04□□□□□ -0.8
HERC3-204ENST00000422770 ACSL4O60488 711 aa10.04□□□□□ -0.8
HERC3-204ENST00000422770 TBL1XO60907 577 aa10.04□□□□□ -0.8
HERC3-204ENST00000422770 GLI1P08151 1106 aa10.04□□□□□ -0.8
HERC3-204ENST00000422770 SKILP12757 684 aa10.04□□□□□ -0.8
HERC3-204ENST00000422770 CDH5P33151 784 aaPredicted RBP10.04□□□□□ -0.8
HERC3-204ENST00000422770 WASP42768 502 aa10.04□□□□□ -0.8
HERC3-204ENST00000422770 FNTBP49356 437 aa10.04□□□□□ -0.8
HERC3-204ENST00000422770 NRLP54845 237 aa10.04□□□□□ -0.8
HERC3-204ENST00000422770 RING1Q06587 406 aa10.04□□□□□ -0.8
HERC3-204ENST00000422770 KLHL30Q0D2K2 578 aa10.04□□□□□ -0.8
HERC3-204ENST00000422770 DMC1Q14565 340 aa10.04□□□□□ -0.8
HERC3-204ENST00000422770 CDO1Q16878 200 aa10.04□□□□□ -0.8
HERC3-204ENST00000422770 CLEC16AQ2KHT3 1053 aa10.04□□□□□ -0.8
HERC3-204ENST00000422770 ADGRF1Q5T601 910 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms