RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 GOLGA8RI6L899 631 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 GPR32O75388 356 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 SERPIND1P05546 499 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 MMP8P22894 467 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 CHKAP35790 457 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 GEMP55040 296 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 USP10Q14694 798 aaKnown RBP10.03□□□□□ -0.8
CMSS1-201ENST00000421999 UGP2Q16851 508 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 MFSD7Q6UXD7 560 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 ANGPTL8Q6UXH0 198 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 GET4Q7L5D6 327 aaPredicted RBP10.03□□□□□ -0.8
CMSS1-201ENST00000421999 TSPAN18Q96SJ8 248 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 SCUBE2Q9NQ36 999 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 HMGXB4Q9UGU5 601 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.03□□□□□ -0.8
CMSS1-201ENST00000421999 TRDMT1O14717 391 aaKnown RBP10.03□□□□□ -0.8
CMSS1-201ENST00000421999 CYP1A2P05177 515 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 POLBP06746 335 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 SERPINF2P08697 491 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 MARCKSL1P49006 195 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 ATXN3P54252 364 aaPredicted RBP10.03□□□□□ -0.8
CMSS1-201ENST00000421999 TAF10Q12962 218 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 IMPG1Q17R60 797 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 ZNF284Q2VY69 593 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 FNDC3BQ53EP0 1204 aaKnown RBP10.03□□□□□ -0.8
CMSS1-201ENST00000421999 TIGD5Q53EQ6 642 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 DENND1CQ8IV53 801 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 THOC1Q96FV9 657 aaKnown RBP10.03□□□□□ -0.8
CMSS1-201ENST00000421999 TBCBQ99426 244 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 C11orf84Q9BUA3 381 aaPredicted RBP10.03□□□□□ -0.8
CMSS1-201ENST00000421999 BRD9Q9H8M2 597 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 DMGDHQ9UI17 866 aaKnown RBP10.03□□□□□ -0.8
CMSS1-201ENST00000421999 BAG5Q9UL15 447 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 STXBP5LQ9Y2K9 1186 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 MYH11P35749 1972 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 C2orf81A6NN90 581 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 CHRNA1P02708 482 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 ITIH2P19823 946 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 CYP3A5P20815 502 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 ASPAP45381 313 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 GEMIN4P57678 1058 aaKnown RBP10.03□□□□□ -0.8
CMSS1-201ENST00000421999 MARCH8Q5T0T0 291 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 LCLAT1Q6UWP7 414 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 ZC3H3Q8IXZ2 948 aaKnown RBP10.03□□□□□ -0.8
CMSS1-201ENST00000421999 MAML1Q92585 1016 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 ZMAT2Q96NC0 199 aaKnown RBP10.03□□□□□ -0.8
CMSS1-201ENST00000421999 TMEM121Q9BTD3 319 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 STRA6Q9BX79 667 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 HAPLN2Q9GZV7 340 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.03□□□□□ -0.8
CMSS1-201ENST00000421999 PLK2Q9NYY3 685 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 NOCTQ9UK39 431 aaKnown RBP10.03□□□□□ -0.8
CMSS1-201ENST00000421999 INSL6Q9Y581 213 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 PCDHA3Q9Y5H8 950 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 RPS6KL1Q9Y6S9 549 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 SMCHD1A6NHR9 2005 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 MYO7AQ13402 2215 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 MYBPHLA2RUH7 354 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 CCL16O15467 120 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 BRAFP15056 766 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 NCF2P19878 526 aaPredicted RBP10.03□□□□□ -0.8
CMSS1-201ENST00000421999 HOXA11P31270 313 aaPredicted RBP10.03□□□□□ -0.8
CMSS1-201ENST00000421999 SOWAHAQ2M3V2 549 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 ALS2CLQ60I27 953 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 SYDE1Q6ZW31 735 aaPredicted RBP10.03□□□□□ -0.8
CMSS1-201ENST00000421999 LRRN4CLQ8ND94 238 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 JOSD2Q8TAC2 188 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 NDRG1Q92597 394 aaKnown RBP10.03□□□□□ -0.8
CMSS1-201ENST00000421999 ERP44Q9BS26 406 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 DUSP16Q9BY84 665 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 DRC3Q9H069 523 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 OR12D3Q9UGF7 316 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 SALL4Q9UJQ4 1053 aa10.03□□□□□ -0.8
CMSS1-201ENST00000421999 PHIPQ8WWQ0 1821 aa10.02□□□□□ -0.8
CMSS1-201ENST00000421999 ZBTB42B2RXF5 422 aa10.02□□□□□ -0.8
CMSS1-201ENST00000421999 SUN1O94901 812 aa10.02□□□□□ -0.8
CMSS1-201ENST00000421999 E2F5Q15329 346 aa10.02□□□□□ -0.8
CMSS1-201ENST00000421999 GPR158Q5T848 1215 aa10.02□□□□□ -0.8
CMSS1-201ENST00000421999 SERPINA13PQ6UXR4 307 aa10.02□□□□□ -0.8
CMSS1-201ENST00000421999 FAM47EQ6ZV65 393 aa10.02□□□□□ -0.8
CMSS1-201ENST00000421999 TRIM48Q8IWZ4 208 aa10.02□□□□□ -0.8
CMSS1-201ENST00000421999 RGL4Q8IZJ4 473 aa10.02□□□□□ -0.8
CMSS1-201ENST00000421999 ACTRT1Q8TDG2 376 aa10.02□□□□□ -0.8
CMSS1-201ENST00000421999 RSPH1Q8WYR4 309 aa10.02□□□□□ -0.8
CMSS1-201ENST00000421999 SPATA17Q96L03 361 aa10.02□□□□□ -0.8
CMSS1-201ENST00000421999 TWNKQ96RR1 684 aa10.02□□□□□ -0.8
CMSS1-201ENST00000421999 SIX4Q9UIU6 781 aa10.02□□□□□ -0.8
CMSS1-201ENST00000421999 E2F8A0AVK6 867 aa10.02□□□□□ -0.81
CMSS1-201ENST00000421999 PMM2O15305 246 aa10.02□□□□□ -0.81
CMSS1-201ENST00000421999 CHRNB2P17787 502 aa10.02□□□□□ -0.81
CMSS1-201ENST00000421999 POLR2EP19388 210 aaKnown RBP10.02□□□□□ -0.81
CMSS1-201ENST00000421999 NR1D1P20393 614 aa10.02□□□□□ -0.81
CMSS1-201ENST00000421999 PSEN1P49768 467 aa10.02□□□□□ -0.81
CMSS1-201ENST00000421999 RASSF2P50749 326 aa10.02□□□□□ -0.81
CMSS1-201ENST00000421999 RENBPP51606 427 aa10.02□□□□□ -0.81
CMSS1-201ENST00000421999 WNT7BP56706 349 aa10.02□□□□□ -0.81
CMSS1-201ENST00000421999 MAP7Q14244 749 aa10.02□□□□□ -0.81
CMSS1-201ENST00000421999 SPARCL1Q14515 664 aa10.02□□□□□ -0.81
CMSS1-201ENST00000421999 KYNUQ16719 465 aa10.02□□□□□ -0.81
CMSS1-201ENST00000421999 VARS2Q5ST30 1063 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms