RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 CDH16O75309 829 aa11.04□□□□□ -0.64
PTCH1-206ENST00000421141 PROSCO94903 275 aa11.04□□□□□ -0.64
PTCH1-206ENST00000421141 MAP3K6O95382 1288 aa11.04□□□□□ -0.64
PTCH1-206ENST00000421141 IL1BP01584 269 aa11.04□□□□□ -0.64
PTCH1-206ENST00000421141 GPM6BQ13491 265 aa11.04□□□□□ -0.64
PTCH1-206ENST00000421141 CCDC38Q502W7 563 aa11.04□□□□□ -0.64
PTCH1-206ENST00000421141 WNT8BQ93098 351 aa11.04□□□□□ -0.64
PTCH1-206ENST00000421141 POLR1EQ9GZS1 481 aaKnown RBP11.04□□□□□ -0.64
PTCH1-206ENST00000421141 CDY1Q9Y6F8 540 aa11.04□□□□□ -0.64
PTCH1-206ENST00000421141 SLC10A3P09131 477 aa11.03□□□□□ -0.64
PTCH1-206ENST00000421141 AARSP49588 968 aaKnown RBP eCLIP11.03□□□□□ -0.64
PTCH1-206ENST00000421141 NAA25Q14CX7 972 aa11.03□□□□□ -0.64
PTCH1-206ENST00000421141 RIBC1Q8N443 379 aaPredicted RBP11.03□□□□□ -0.64
PTCH1-206ENST00000421141 C3orf20Q8ND61 904 aa11.03□□□□□ -0.64
PTCH1-206ENST00000421141 CCDC126Q96EE4 140 aa11.03□□□□□ -0.64
PTCH1-206ENST00000421141 MIR1-1HGQ9H1L0 117 aa11.03□□□□□ -0.64
PTCH1-206ENST00000421141 ESYT3A0FGR9 886 aa11.03□□□□□ -0.64
PTCH1-206ENST00000421141 COILP38432 576 aaPredicted RBP11.03□□□□□ -0.64
PTCH1-206ENST00000421141 TNFSF9P41273 254 aa11.03□□□□□ -0.64
PTCH1-206ENST00000421141 IFT88Q13099 833 aa11.03□□□□□ -0.64
PTCH1-206ENST00000421141 TP53BP2Q13625 1128 aa11.03□□□□□ -0.64
PTCH1-206ENST00000421141 SLC13A5Q86YT5 568 aaPredicted RBP11.03□□□□□ -0.64
PTCH1-206ENST00000421141 VPS37AQ8NEZ2 397 aa11.03□□□□□ -0.64
PTCH1-206ENST00000421141 BAIAP2L1Q9UHR4 511 aa11.03□□□□□ -0.64
PTCH1-206ENST00000421141 TIMM44O43615 452 aa11.03□□□□□ -0.64
PTCH1-206ENST00000421141 OPHN1O60890 802 aa11.03□□□□□ -0.64
PTCH1-206ENST00000421141 ACRP10323 421 aa11.03□□□□□ -0.64
PTCH1-206ENST00000421141 TLE2Q04725 743 aa11.03□□□□□ -0.64
PTCH1-206ENST00000421141 C11orf63Q6NUN7 778 aa11.03□□□□□ -0.64
PTCH1-206ENST00000421141 TRMT11Q7Z4G4 463 aaKnown RBP11.03□□□□□ -0.64
PTCH1-206ENST00000421141 SLC9A9Q8IVB4 645 aa11.03□□□□□ -0.64
PTCH1-206ENST00000421141 TGS1Q96RS0 853 aaKnown RBP11.03□□□□□ -0.64
PTCH1-206ENST00000421141 HACD1B0YJ81 288 aa11.03□□□□□ -0.64
PTCH1-206ENST00000421141 TLR5O60602 858 aa11.03□□□□□ -0.64
PTCH1-206ENST00000421141 E2F6O75461 281 aa11.03□□□□□ -0.64
PTCH1-206ENST00000421141 NFATC1O95644 943 aa11.03□□□□□ -0.64
PTCH1-206ENST00000421141 PDCD7Q8N8D1 485 aaKnown RBP11.03□□□□□ -0.64
PTCH1-206ENST00000421141 DUSP16Q9BY84 665 aa11.03□□□□□ -0.64
PTCH1-206ENST00000421141 KCTD10Q9H3F6 313 aa11.03□□□□□ -0.64
PTCH1-206ENST00000421141 SMARCAL1Q9NZC9 954 aa11.03□□□□□ -0.64
PTCH1-206ENST00000421141 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.03□□□□□ -0.64
PTCH1-206ENST00000421141 F8VP50 259 aa11.03□□□□□ -0.64
PTCH1-206ENST00000421141 OTUD4Q01804 1114 aaKnown RBP11.03□□□□□ -0.64
PTCH1-206ENST00000421141 FOXD4Q12950 439 aaPredicted RBP11.03□□□□□ -0.64
PTCH1-206ENST00000421141 AMIGO3Q86WK7 504 aa11.03□□□□□ -0.64
PTCH1-206ENST00000421141 CHPFQ8IZ52 775 aa11.03□□□□□ -0.64
PTCH1-206ENST00000421141 TMEM159Q96B96 161 aa11.03□□□□□ -0.64
PTCH1-206ENST00000421141 FICDQ9BVA6 458 aa11.03□□□□□ -0.64
PTCH1-206ENST00000421141 RRAGDQ9NQL2 400 aaPredicted RBP11.03□□□□□ -0.64
PTCH1-206ENST00000421141 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.03□□□□□ -0.64
PTCH1-206ENST00000421141 PSMD12O00232 456 aaPredicted RBP11.03□□□□□ -0.64
PTCH1-206ENST00000421141 B4GALT5O43286 388 aa11.03□□□□□ -0.64
PTCH1-206ENST00000421141 KRT16P08779 473 aa11.03□□□□□ -0.64
PTCH1-206ENST00000421141 SNRPAP09012 282 aaKnown RBP11.03□□□□□ -0.64
PTCH1-206ENST00000421141 SPATA31C1P0DKV0 1188 aa11.03□□□□□ -0.64
PTCH1-206ENST00000421141 HTR1BP28222 390 aa11.03□□□□□ -0.64
PTCH1-206ENST00000421141 CARSP49589 748 aaKnown RBP11.03□□□□□ -0.64
PTCH1-206ENST00000421141 DDR2Q16832 855 aa11.03□□□□□ -0.64
PTCH1-206ENST00000421141 TRIM10Q9UDY6 481 aa11.03□□□□□ -0.64
PTCH1-206ENST00000421141 PCDHB9Q9Y5E1 797 aa11.03□□□□□ -0.64
PTCH1-206ENST00000421141 SPECC1L-ADORA2AF8WAN1 911 aa11.02□□□□□ -0.64
PTCH1-206ENST00000421141 SPAG7O75391 227 aa11.02□□□□□ -0.64
PTCH1-206ENST00000421141 SYN1P17600 705 aa11.02□□□□□ -0.64
PTCH1-206ENST00000421141 SARSP49591 514 aaKnown RBP11.02□□□□□ -0.64
PTCH1-206ENST00000421141 DLK2Q6UY11 383 aa11.02□□□□□ -0.64
PTCH1-206ENST00000421141 ILDR2Q71H61 639 aa11.02□□□□□ -0.64
PTCH1-206ENST00000421141 ARHGEF19Q8IW93 802 aa11.02□□□□□ -0.64
PTCH1-206ENST00000421141 GRIN3AQ8TCU5 1115 aa11.02□□□□□ -0.64
PTCH1-206ENST00000421141 OR12D3Q9UGF7 316 aa11.02□□□□□ -0.64
PTCH1-206ENST00000421141 SCN7AQ01118 1682 aa11.02□□□□□ -0.64
PTCH1-206ENST00000421141 IGKV6D-41A0A0C4DH26 115 aa11.02□□□□□ -0.64
PTCH1-206ENST00000421141 B4GALT4O60513 344 aa11.02□□□□□ -0.64
PTCH1-206ENST00000421141 FGFR1P11362 822 aa11.02□□□□□ -0.64
PTCH1-206ENST00000421141 ITGA8P53708 1063 aa11.02□□□□□ -0.64
PTCH1-206ENST00000421141 CBWD6Q4V339 395 aa11.02□□□□□ -0.64
PTCH1-206ENST00000421141 CBWD3Q5JTY5 395 aa11.02□□□□□ -0.64
PTCH1-206ENST00000421141 CBWD5Q5RIA9 395 aa11.02□□□□□ -0.64
PTCH1-206ENST00000421141 MON1AQ86VX9 555 aa11.02□□□□□ -0.64
PTCH1-206ENST00000421141 CCDC33Q8N5R6 958 aa11.02□□□□□ -0.64
PTCH1-206ENST00000421141 AGR3Q8TD06 166 aa11.02□□□□□ -0.64
PTCH1-206ENST00000421141 PRPF18Q99633 342 aaKnown RBP11.02□□□□□ -0.64
PTCH1-206ENST00000421141 CNGB3Q9NQW8 809 aa11.02□□□□□ -0.64
PTCH1-206ENST00000421141 PCMTD2Q9NV79 361 aa11.02□□□□□ -0.64
PTCH1-206ENST00000421141 SPASTQ9UBP0 616 aa11.02□□□□□ -0.64
PTCH1-206ENST00000421141 GOLGA8RI6L899 631 aa11.02□□□□□ -0.65
PTCH1-206ENST00000421141 ANGPT2O15123 496 aa11.02□□□□□ -0.65
PTCH1-206ENST00000421141 PPP1R11O60927 126 aaPredicted RBP11.02□□□□□ -0.65
PTCH1-206ENST00000421141 TRIM16O95361 564 aa11.02□□□□□ -0.65
PTCH1-206ENST00000421141 E2F4Q16254 413 aa11.02□□□□□ -0.65
PTCH1-206ENST00000421141 HYIQ5T013 277 aa11.02□□□□□ -0.65
PTCH1-206ENST00000421141 LPCAT1Q8NF37 534 aa11.02□□□□□ -0.65
PTCH1-206ENST00000421141 OR8D1Q8WZ84 308 aa11.02□□□□□ -0.65
PTCH1-206ENST00000421141 TRABDQ9H4I3 376 aa11.02□□□□□ -0.65
PTCH1-206ENST00000421141 OR56A5P0C7T3 313 aa11.02□□□□□ -0.65
PTCH1-206ENST00000421141 MAGEA4P43358 317 aa11.02□□□□□ -0.65
PTCH1-206ENST00000421141 PMS1P54277 932 aaKnown RBP11.02□□□□□ -0.65
PTCH1-206ENST00000421141 ANKS6Q68DC2 871 aa11.02□□□□□ -0.65
PTCH1-206ENST00000421141 HES6Q96HZ4 224 aa11.02□□□□□ -0.65
PTCH1-206ENST00000421141 CELF6Q96J87 481 aaKnown RBP11.02□□□□□ -0.65
PTCH1-206ENST00000421141 ERP44Q9BS26 406 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms