RNA–Protein interactions for RNA: ENST00000420489.6

CNGA1-203, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CNGA1, Length 2,746 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-203ENST00000420489 INO80BQ9C086 356 aaPredicted RBP4.07□□□□□ -1.76
CNGA1-203ENST00000420489 MLXIPQ9HAP2 919 aa4.07□□□□□ -1.76
CNGA1-203ENST00000420489 BRMS1Q9HCU9 246 aa4.07□□□□□ -1.76
CNGA1-203ENST00000420489 GGT7Q9UJ14 662 aa4.07□□□□□ -1.76
CNGA1-203ENST00000420489 GPR160Q9UJ42 338 aa4.07□□□□□ -1.76
CNGA1-203ENST00000420489 CACNA1DQ01668 2161 aa4.06□□□□□ -1.76
CNGA1-203ENST00000420489 GOLGA6L3A6NEY3 463 aa4.06□□□□□ -1.76
CNGA1-203ENST00000420489 KIF1CO43896 1103 aaKnown RBP4.06□□□□□ -1.76
CNGA1-203ENST00000420489 MOSPD3O75425 235 aa4.06□□□□□ -1.76
CNGA1-203ENST00000420489 WNT1P04628 370 aa4.06□□□□□ -1.76
CNGA1-203ENST00000420489 INHBBP09529 407 aa4.06□□□□□ -1.76
CNGA1-203ENST00000420489 CT47B1P0C2W7 299 aaPredicted RBP4.06□□□□□ -1.76
CNGA1-203ENST00000420489 HSPD1P10809 573 aaKnown RBP4.06□□□□□ -1.76
CNGA1-203ENST00000420489 WT1P19544 449 aaPredicted RBP4.06□□□□□ -1.76
CNGA1-203ENST00000420489 VAMP1P23763 118 aa4.06□□□□□ -1.76
CNGA1-203ENST00000420489 PXNP49023 591 aaPredicted RBP4.06□□□□□ -1.76
CNGA1-203ENST00000420489 AK2P54819 239 aa4.06□□□□□ -1.76
CNGA1-203ENST00000420489 TIMM10P62072 90 aa4.06□□□□□ -1.76
CNGA1-203ENST00000420489 MTA1Q13330 715 aa4.06□□□□□ -1.76
CNGA1-203ENST00000420489 MRPL58Q14197 206 aaKnown RBP4.06□□□□□ -1.76
CNGA1-203ENST00000420489 C12orf60Q5U649 245 aa4.06□□□□□ -1.76
CNGA1-203ENST00000420489 TMEM198Q66K66 360 aa4.06□□□□□ -1.76
CNGA1-203ENST00000420489 NLRC3Q7RTR2 1065 aa4.06□□□□□ -1.76
CNGA1-203ENST00000420489 DDX42Q86XP3 938 aaKnown RBP eCLIP4.06□□□□□ -1.76
CNGA1-203ENST00000420489 PTRH1Q86Y79 214 aaKnown RBP4.06□□□□□ -1.76
CNGA1-203ENST00000420489 CCDC13Q8IYE1 715 aa4.06□□□□□ -1.76
CNGA1-203ENST00000420489 COLGALT2Q8IYK4 626 aa4.06□□□□□ -1.76
CNGA1-203ENST00000420489 C3orf20Q8ND61 904 aa4.06□□□□□ -1.76
CNGA1-203ENST00000420489 SAP25Q8TEE9 199 aa4.06□□□□□ -1.76
CNGA1-203ENST00000420489 FUBP3Q96I24 572 aaKnown RBP eCLIP4.06□□□□□ -1.76
CNGA1-203ENST00000420489 MAP6Q96JE9 813 aa4.06□□□□□ -1.76
CNGA1-203ENST00000420489 FEM1CQ96JP0 617 aa4.06□□□□□ -1.76
CNGA1-203ENST00000420489 NEUROD6Q96NK8 337 aa4.06□□□□□ -1.76
CNGA1-203ENST00000420489 MTRRQ9UBK8 725 aa4.06□□□□□ -1.76
CNGA1-203ENST00000420489 BTBD3Q9Y2F9 522 aa4.06□□□□□ -1.76
CNGA1-203ENST00000420489 NRP1O14786 923 aa4.06□□□□□ -1.76
CNGA1-203ENST00000420489 MAGEC1O60732 1142 aa4.06□□□□□ -1.76
CNGA1-203ENST00000420489 CSO75390 466 aaKnown RBP4.06□□□□□ -1.76
CNGA1-203ENST00000420489 CNTN5O94779 1100 aa4.06□□□□□ -1.76
CNGA1-203ENST00000420489 CBX6O95503 412 aa4.06□□□□□ -1.76
CNGA1-203ENST00000420489 TTLL1O95922 423 aa4.06□□□□□ -1.76
CNGA1-203ENST00000420489 ITGAVP06756 1048 aa4.06□□□□□ -1.76
CNGA1-203ENST00000420489 UBA1P22314 1058 aaKnown RBP4.06□□□□□ -1.76
CNGA1-203ENST00000420489 RBMXP38159 391 aaKnown RBP4.06□□□□□ -1.76
CNGA1-203ENST00000420489 ARL4AP40617 200 aa4.06□□□□□ -1.76
CNGA1-203ENST00000420489 MEOX1P50221 254 aa4.06□□□□□ -1.76
CNGA1-203ENST00000420489 GALK1P51570 392 aa4.06□□□□□ -1.76
CNGA1-203ENST00000420489 RPS6P62753 249 aaKnown RBP4.06□□□□□ -1.76
CNGA1-203ENST00000420489 PPP2R2BQ00005 443 aa4.06□□□□□ -1.76
CNGA1-203ENST00000420489 ISXQ2M1V0 245 aa4.06□□□□□ -1.76
CNGA1-203ENST00000420489 SLFN13Q68D06 897 aa4.06□□□□□ -1.76
CNGA1-203ENST00000420489 SLC30A10Q6XR72 485 aa4.06□□□□□ -1.76
CNGA1-203ENST00000420489 NLRX1Q86UT6 975 aa4.06□□□□□ -1.76
CNGA1-203ENST00000420489 ST6GALNAC3Q8NDV1 305 aa4.06□□□□□ -1.76
CNGA1-203ENST00000420489 FEZF2Q8TBJ5 459 aa4.06□□□□□ -1.76
CNGA1-203ENST00000420489 COG1Q8WTW3 980 aa4.06□□□□□ -1.76
CNGA1-203ENST00000420489 TSR2Q969E8 191 aaKnown RBP4.06□□□□□ -1.76
CNGA1-203ENST00000420489 FCRL2Q96LA5 508 aaPredicted RBP4.06□□□□□ -1.76
CNGA1-203ENST00000420489 FAM193BQ96PV7 902 aaPredicted RBP4.06□□□□□ -1.76
CNGA1-203ENST00000420489 USP36Q9P275 1121 aaKnown RBP4.06□□□□□ -1.76
CNGA1-203ENST00000420489 SF3B1O75533 1304 aaKnown RBP eCLIP4.05□□□□□ -1.76
CNGA1-203ENST00000420489 SLC38A8A6NNN8 435 aa4.05□□□□□ -1.76
CNGA1-203ENST00000420489 NPIPB6E9PJ23 425 aa4.05□□□□□ -1.76
CNGA1-203ENST00000420489 MKRN2OSH3BPM6 223 aa4.05□□□□□ -1.76
CNGA1-203ENST00000420489 NOP56O00567 594 aaKnown RBP4.05□□□□□ -1.76
CNGA1-203ENST00000420489 FIBPO43427 364 aa4.05□□□□□ -1.76
CNGA1-203ENST00000420489 ABLIM3O94929 683 aa4.05□□□□□ -1.76
CNGA1-203ENST00000420489 GSNP06396 782 aa4.05□□□□□ -1.76
CNGA1-203ENST00000420489 FAM200BP0CF97 657 aa4.05□□□□□ -1.76
CNGA1-203ENST00000420489 CKMT1AP12532 417 aa4.05□□□□□ -1.76
CNGA1-203ENST00000420489 NME1P15531 152 aaKnown RBP4.05□□□□□ -1.76
CNGA1-203ENST00000420489 CCND2P30279 289 aa4.05□□□□□ -1.76
CNGA1-203ENST00000420489 CIITAP33076 1130 aa4.05□□□□□ -1.76
CNGA1-203ENST00000420489 DYNLL1P63167 89 aaKnown RBP4.05□□□□□ -1.76
CNGA1-203ENST00000420489 POU5F1Q01860 360 aaKnown RBP4.05□□□□□ -1.76
CNGA1-203ENST00000420489 ZSCAN23Q3MJ62 389 aa4.05□□□□□ -1.76
CNGA1-203ENST00000420489 C20orf194Q5TEA3 1177 aa4.05□□□□□ -1.76
CNGA1-203ENST00000420489 ATF7IP2Q5U623 682 aa4.05□□□□□ -1.76
CNGA1-203ENST00000420489 SHEQ5VZ18 495 aa4.05□□□□□ -1.76
CNGA1-203ENST00000420489 EAF1Q96JC9 268 aaPredicted RBP4.05□□□□□ -1.76
CNGA1-203ENST00000420489 RIOK1Q9BRS2 568 aaKnown RBP4.05□□□□□ -1.76
CNGA1-203ENST00000420489 LRRCC1Q9C099 1032 aa4.05□□□□□ -1.76
CNGA1-203ENST00000420489 SLKQ9H2G2 1235 aaPredicted RBP4.05□□□□□ -1.76
CNGA1-203ENST00000420489 RRAGDQ9NQL2 400 aaPredicted RBP4.05□□□□□ -1.76
CNGA1-203ENST00000420489 COPG2Q9UBF2 871 aa4.05□□□□□ -1.76
CNGA1-203ENST00000420489 PCDHGA9Q9Y5G4 932 aaKnown RBP4.05□□□□□ -1.76
CNGA1-203ENST00000420489 COL4A3BPQ9Y5P4 624 aa4.05□□□□□ -1.76
CNGA1-203ENST00000420489 TLN1Q9Y490 2541 aaKnown RBP4.05□□□□□ -1.76
CNGA1-203ENST00000420489 CACNA1EQ15878 2313 aa4.05□□□□□ -1.76
CNGA1-203ENST00000420489 ETV2O00321 342 aaPredicted RBP4.05□□□□□ -1.76
CNGA1-203ENST00000420489 MAGEB2O15479 319 aa4.05□□□□□ -1.76
CNGA1-203ENST00000420489 ZC3H11AO75152 810 aaKnown RBP eCLIP4.05□□□□□ -1.76
CNGA1-203ENST00000420489 USP12O75317 370 aa4.05□□□□□ -1.76
CNGA1-203ENST00000420489 UBOX5O94941 541 aa4.05□□□□□ -1.76
CNGA1-203ENST00000420489 ZSCAN22P10073 491 aaPredicted RBP4.05□□□□□ -1.76
CNGA1-203ENST00000420489 CD6P30203 668 aa4.05□□□□□ -1.76
CNGA1-203ENST00000420489 HSD17B4P51659 736 aa4.05□□□□□ -1.76
CNGA1-203ENST00000420489 NTHL1P78549 312 aa4.05□□□□□ -1.76
CNGA1-203ENST00000420489 HSDL1Q3SXM5 330 aa4.05□□□□□ -1.76
CNGA1-203ENST00000420489 OVOS1Q6IE37 1185 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms