RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 EIF4HQ15056 248 aaKnown RBP17.14■□□□□ 0.33
LINC00404-201ENST00000418660 E2F5Q15329 346 aa17.14■□□□□ 0.33
LINC00404-201ENST00000418660 KLHDC7AQ5VTJ3 777 aa17.14■□□□□ 0.33
LINC00404-201ENST00000418660 SYPL2Q5VXT5 272 aa17.14■□□□□ 0.33
LINC00404-201ENST00000418660 SASS6Q6UVJ0 657 aa17.14■□□□□ 0.33
LINC00404-201ENST00000418660 SLC47A2Q86VL8 602 aa17.14■□□□□ 0.33
LINC00404-201ENST00000418660 IPO4Q8TEX9 1081 aaKnown RBP17.14■□□□□ 0.33
LINC00404-201ENST00000418660 UCMAQ8WVF2 138 aa17.14■□□□□ 0.33
LINC00404-201ENST00000418660 PPP1R13BQ96KQ4 1090 aa17.14■□□□□ 0.33
LINC00404-201ENST00000418660 SPACA7Q96KW9 195 aa17.14■□□□□ 0.33
LINC00404-201ENST00000418660 POPDC2Q9HBU9 364 aa17.14■□□□□ 0.33
LINC00404-201ENST00000418660 CD248Q9HCU0 757 aa17.14■□□□□ 0.33
LINC00404-201ENST00000418660 ANO10Q9NW15 660 aa17.14■□□□□ 0.33
LINC00404-201ENST00000418660 CACNA2D2Q9NY47 1150 aa17.14■□□□□ 0.33
LINC00404-201ENST00000418660 TLR6Q9Y2C9 796 aa17.14■□□□□ 0.33
LINC00404-201ENST00000418660 IRAK2O43187 625 aa17.13■□□□□ 0.33
LINC00404-201ENST00000418660 TIMM44O43615 452 aa17.13■□□□□ 0.33
LINC00404-201ENST00000418660 MBD3O95983 291 aa17.13■□□□□ 0.33
LINC00404-201ENST00000418660 ZNF806P0C7X5 589 aa17.13■□□□□ 0.33
LINC00404-201ENST00000418660 PNMA6AP0CW24 399 aaPredicted RBP17.13■□□□□ 0.33
LINC00404-201ENST00000418660 BCKDHBP21953 392 aa17.13■□□□□ 0.33
LINC00404-201ENST00000418660 DRAP1Q14919 205 aaPredicted RBP17.13■□□□□ 0.33
LINC00404-201ENST00000418660 MAP7D1Q3KQU3 841 aa17.13■□□□□ 0.33
LINC00404-201ENST00000418660 PLA2G2CQ5R387 149 aa17.13■□□□□ 0.33
LINC00404-201ENST00000418660 MPP7Q5T2T1 576 aa17.13■□□□□ 0.33
LINC00404-201ENST00000418660 CDKAL1Q5VV42 579 aa17.13■□□□□ 0.33
LINC00404-201ENST00000418660 PMS2CLQ68D20 193 aa17.13■□□□□ 0.33
LINC00404-201ENST00000418660 ERMP1Q7Z2K6 904 aa17.13■□□□□ 0.33
LINC00404-201ENST00000418660 PASD1Q8IV76 773 aa17.13■□□□□ 0.33
LINC00404-201ENST00000418660 RLN3Q8WXF3 142 aa17.13■□□□□ 0.33
LINC00404-201ENST00000418660 SLC39A13Q96H72 371 aa17.13■□□□□ 0.33
LINC00404-201ENST00000418660 FCRL2Q96LA5 508 aaPredicted RBP17.13■□□□□ 0.33
LINC00404-201ENST00000418660 NOX5Q96PH1 765 aa17.13■□□□□ 0.33
LINC00404-201ENST00000418660 CPXM1Q96SM3 734 aa17.13■□□□□ 0.33
LINC00404-201ENST00000418660 DDX50Q9BQ39 737 aaKnown RBP17.13■□□□□ 0.33
LINC00404-201ENST00000418660 ELOVL2Q9NXB9 296 aa17.13■□□□□ 0.33
LINC00404-201ENST00000418660 TAB2Q9NYJ8 693 aa17.13■□□□□ 0.33
LINC00404-201ENST00000418660 THAP10Q9P2Z0 257 aaPredicted RBP17.13■□□□□ 0.33
LINC00404-201ENST00000418660 STON1Q9Y6Q2 735 aa17.13■□□□□ 0.33
LINC00404-201ENST00000418660 GOLGA6L7A0A1B0GV03 622 aa17.12■□□□□ 0.33
LINC00404-201ENST00000418660 GLI1P08151 1106 aa17.12■□□□□ 0.33
LINC00404-201ENST00000418660 UCHL3P15374 230 aa17.12■□□□□ 0.33
LINC00404-201ENST00000418660 MPLP40238 635 aa17.12■□□□□ 0.33
LINC00404-201ENST00000418660 SNX16P57768 344 aa17.12■□□□□ 0.33
LINC00404-201ENST00000418660 ENPP2Q13822 863 aa17.12■□□□□ 0.33
LINC00404-201ENST00000418660 RAPGEF1Q13905 1077 aa17.12■□□□□ 0.33
LINC00404-201ENST00000418660 FAM133BQ5BKY9 247 aaKnown RBP17.12■□□□□ 0.33
LINC00404-201ENST00000418660 EFHC1Q5JVL4 640 aa17.12■□□□□ 0.33
LINC00404-201ENST00000418660 PIK3R6Q5UE93 754 aa17.12■□□□□ 0.33
LINC00404-201ENST00000418660 KIAA1211LQ6NV74 962 aa17.12■□□□□ 0.33
LINC00404-201ENST00000418660 TAC4Q86UU9 113 aa17.12■□□□□ 0.33
LINC00404-201ENST00000418660 ADAM32Q8TC27 787 aa17.12■□□□□ 0.33
LINC00404-201ENST00000418660 NETO1Q8TDF5 533 aa17.12■□□□□ 0.33
LINC00404-201ENST00000418660 LSM14BQ9BX40 385 aaKnown RBP17.12■□□□□ 0.33
LINC00404-201ENST00000418660 NAA15Q9BXJ9 866 aaKnown RBP17.12■□□□□ 0.33
LINC00404-201ENST00000418660 VPS16Q9H269 839 aa17.12■□□□□ 0.33
LINC00404-201ENST00000418660 VPS45Q9NRW7 570 aa17.12■□□□□ 0.33
LINC00404-201ENST00000418660 ASNSD1Q9NWL6 643 aa17.12■□□□□ 0.33
LINC00404-201ENST00000418660 TJP2Q9UDY2 1190 aa17.12■□□□□ 0.33
LINC00404-201ENST00000418660 CDV3Q9UKY7 258 aaKnown RBP17.12■□□□□ 0.33
LINC00404-201ENST00000418660 FHOD1Q9Y613 1164 aa17.12■□□□□ 0.33
LINC00404-201ENST00000418660 RAD54BQ9Y620 910 aa17.12■□□□□ 0.33
LINC00404-201ENST00000418660 BCLAF3A2AJT9 711 aaKnown RBP17.11■□□□□ 0.33
LINC00404-201ENST00000418660 WASH3PC4AMC7 463 aa17.11■□□□□ 0.33
LINC00404-201ENST00000418660 MAP3K13O43283 966 aa17.11■□□□□ 0.33
LINC00404-201ENST00000418660 TRUB2O95900 331 aaKnown RBP17.11■□□□□ 0.33
LINC00404-201ENST00000418660 IGLV3-25P01717 112 aa17.11■□□□□ 0.33
LINC00404-201ENST00000418660 TPM2P07951 284 aa17.11■□□□□ 0.33
LINC00404-201ENST00000418660 HLA-FP30511 346 aa17.11■□□□□ 0.33
LINC00404-201ENST00000418660 SLC6A4P31645 630 aa17.11■□□□□ 0.33
LINC00404-201ENST00000418660 SGSHP51688 502 aa17.11■□□□□ 0.33
LINC00404-201ENST00000418660 CREB5Q02930 508 aa17.11■□□□□ 0.33
LINC00404-201ENST00000418660 KRT31Q15323 416 aa17.11■□□□□ 0.33
LINC00404-201ENST00000418660 SF3A2Q15428 464 aaKnown RBP17.11■□□□□ 0.33
LINC00404-201ENST00000418660 TAF5Q15542 800 aa17.11■□□□□ 0.33
LINC00404-201ENST00000418660 CCDC6Q16204 474 aa17.11■□□□□ 0.33
LINC00404-201ENST00000418660 STX1AQ16623 288 aa17.11■□□□□ 0.33
LINC00404-201ENST00000418660 CCDC183Q5T5S1 534 aa17.11■□□□□ 0.33
LINC00404-201ENST00000418660 TMEM215Q68D42 235 aa17.11■□□□□ 0.33
LINC00404-201ENST00000418660 RNF43Q68DV7 783 aa17.11■□□□□ 0.33
LINC00404-201ENST00000418660 NADSYN1Q6IA69 706 aa17.11■□□□□ 0.33
LINC00404-201ENST00000418660 RFWD3Q6PCD5 774 aa17.11■□□□□ 0.33
LINC00404-201ENST00000418660 C11orf57Q6ZUT1 292 aaPredicted RBP17.11■□□□□ 0.33
LINC00404-201ENST00000418660 KIAA0907Q7Z7F0 614 aaPredicted RBP17.11■□□□□ 0.33
LINC00404-201ENST00000418660 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.11■□□□□ 0.33
LINC00404-201ENST00000418660 ZNF557Q8N988 423 aaPredicted RBP17.11■□□□□ 0.33
LINC00404-201ENST00000418660 C12orf50Q8NA57 414 aaPredicted RBP17.11■□□□□ 0.33
LINC00404-201ENST00000418660 C1orf131Q8NDD1 294 aaKnown RBP17.11■□□□□ 0.33
LINC00404-201ENST00000418660 WFIKKN2Q8TEU8 576 aa17.11■□□□□ 0.33
LINC00404-201ENST00000418660 STK33Q9BYT3 514 aa17.11■□□□□ 0.33
LINC00404-201ENST00000418660 CIPCQ9C0C6 399 aa17.11■□□□□ 0.33
LINC00404-201ENST00000418660 PLCB1Q9NQ66 1216 aa17.11■□□□□ 0.33
LINC00404-201ENST00000418660 FANCLQ9NW38 375 aa17.11■□□□□ 0.33
LINC00404-201ENST00000418660 CALCOCO1Q9P1Z2 691 aa17.11■□□□□ 0.33
LINC00404-201ENST00000418660 MBD1Q9UIS9 605 aaPredicted RBP17.11■□□□□ 0.33
LINC00404-201ENST00000418660 CEP83Q9Y592 693 aa17.11■□□□□ 0.33
LINC00404-201ENST00000418660 WDR87Q6ZQQ6 2873 aa17.11■□□□□ 0.33
LINC00404-201ENST00000418660 SPTBN4Q9H254 2564 aa17.1■□□□□ 0.33
LINC00404-201ENST00000418660 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.1■□□□□ 0.33
LINC00404-201ENST00000418660 TBL1XO60907 577 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms