RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 NRG1Q02297 640 aaPredicted RBP9.36□□□□□ -0.91
LINCMD1-201ENST00000418518 PDK1Q15118 436 aa9.36□□□□□ -0.91
LINCMD1-201ENST00000418518 NFE2Q16621 373 aaPredicted RBP9.36□□□□□ -0.91
LINCMD1-201ENST00000418518 KLHL38Q2WGJ6 581 aa9.36□□□□□ -0.91
LINCMD1-201ENST00000418518 PAN2Q504Q3 1202 aaKnown RBP9.36□□□□□ -0.91
LINCMD1-201ENST00000418518 MSANTD2Q6P1R3 559 aa9.36□□□□□ -0.91
LINCMD1-201ENST00000418518 RFX8Q6ZV50 586 aa9.36□□□□□ -0.91
LINCMD1-201ENST00000418518 TAC4Q86UU9 113 aa9.36□□□□□ -0.91
LINCMD1-201ENST00000418518 TRABD2AQ86V40 505 aa9.36□□□□□ -0.91
LINCMD1-201ENST00000418518 NLRP14Q86W24 1093 aa9.36□□□□□ -0.91
LINCMD1-201ENST00000418518 DCP1BQ8IZD4 617 aaKnown RBP9.36□□□□□ -0.91
LINCMD1-201ENST00000418518 SLC7A14Q8TBB6 771 aa9.36□□□□□ -0.91
LINCMD1-201ENST00000418518 BCAS4Q8TDM0 211 aa9.36□□□□□ -0.91
LINCMD1-201ENST00000418518 DQX1Q8TE96 717 aaKnown RBP9.36□□□□□ -0.91
LINCMD1-201ENST00000418518 HASPINQ8TF76 798 aa9.36□□□□□ -0.91
LINCMD1-201ENST00000418518 PYROXD1Q8WU10 500 aa9.36□□□□□ -0.91
LINCMD1-201ENST00000418518 TFB1MQ8WVM0 346 aaKnown RBP9.36□□□□□ -0.91
LINCMD1-201ENST00000418518 C8orf48Q96LL4 319 aa9.36□□□□□ -0.91
LINCMD1-201ENST00000418518 SPATA13Q96N96 652 aa9.36□□□□□ -0.91
LINCMD1-201ENST00000418518 CASD1Q96PB1 797 aa9.36□□□□□ -0.91
LINCMD1-201ENST00000418518 COLEC11Q9BWP8 271 aa9.36□□□□□ -0.91
LINCMD1-201ENST00000418518 OSBPL2Q9H1P3 480 aa9.36□□□□□ -0.91
LINCMD1-201ENST00000418518 SMOC2Q9H3U7 446 aa9.36□□□□□ -0.91
LINCMD1-201ENST00000418518 SSU72Q9NP77 194 aaKnown RBP9.36□□□□□ -0.91
LINCMD1-201ENST00000418518 RAB6BQ9NRW1 208 aa9.36□□□□□ -0.91
LINCMD1-201ENST00000418518 DDIT4Q9NX09 232 aa9.36□□□□□ -0.91
LINCMD1-201ENST00000418518 ARHGEF38Q9NXL2 777 aa9.36□□□□□ -0.91
LINCMD1-201ENST00000418518 PSMC3IPQ9P2W1 217 aaPredicted RBP9.36□□□□□ -0.91
LINCMD1-201ENST00000418518 CTNNAL1Q9UBT7 734 aa9.36□□□□□ -0.91
LINCMD1-201ENST00000418518 RABGEF1Q9UJ41 708 aa9.36□□□□□ -0.91
LINCMD1-201ENST00000418518 OGDHLQ9ULD0 1010 aa9.36□□□□□ -0.91
LINCMD1-201ENST00000418518 MFHAS1Q9Y4C4 1052 aa9.36□□□□□ -0.91
LINCMD1-201ENST00000418518 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.36□□□□□ -0.91
LINCMD1-201ENST00000418518 MIA3Q5JRA6 1907 aa9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 FAM92AA1XBS5 289 aa9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 GMNCA6NCL1 334 aa9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 OR6C75A6NL08 312 aa9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 GOLGA8MH3BSY2 632 aa9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 PPP1R12AO14974 1030 aaPredicted RBP9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 NCAM2O15394 837 aa9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 PRPF4O43172 522 aaKnown RBP eCLIP9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 HOXA2O43364 376 aa9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 BANF1O75531 89 aa9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 PARNO95453 639 aaKnown RBP9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 MLNP12872 115 aa9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 NCAM1P13591 858 aa9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 FGFR3P22607 806 aa9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 RABGGTBP53611 331 aa9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 SLC5A3P53794 718 aa9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 ZNF33AQ06730 810 aa9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 ARL13BQ3SXY8 428 aa9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 BBS9Q3SYG4 887 aa9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 BRMS1LQ5PSV4 323 aa9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 ARTNQ5T4W7 220 aa9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 MANEALQ5VSG8 457 aa9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 BSPRYQ5W0U4 402 aa9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 HEATR6Q6AI08 1181 aaKnown RBP9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 TTC19Q6DKK2 380 aaPredicted RBP9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 FOXR1Q6PIV2 292 aa9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 ADGRD1Q6QNK2 874 aa9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 PDZD4Q76G19 769 aaPredicted RBP9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 ZNF534Q76KX8 674 aa9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 CAND1Q86VP6 1230 aaKnown RBP9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 SPATS2Q86XZ4 545 aaKnown RBP9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 SPATA2LQ8IUW3 424 aaPredicted RBP9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 KLHDC8BQ8IXV7 354 aa9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 CYP4X1Q8N118 509 aa9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 VPS52Q8N1B4 723 aa9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 FBXO36Q8NEA4 188 aa9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 CCDC110Q8TBZ0 833 aa9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 MDM1Q8TC05 714 aa9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 MZB1Q8WU39 189 aa9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 HTR3CQ8WXA8 447 aa9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 SEPT8Q92599 483 aa9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 DPF3Q92784 378 aa9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 ZNF317Q96PQ6 595 aaPredicted RBP9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 CCT8L2Q96SF2 557 aa9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 TMEM175Q9BSA9 504 aa9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 OXCT2Q9BYC2 517 aaPredicted RBP9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 UNC93B1Q9H1C4 597 aa9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 VPS37BQ9H9H4 285 aa9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 ETNK1Q9HBU6 452 aa9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 XAB2Q9HCS7 855 aaKnown RBP9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 ANLNQ9NQW6 1124 aa9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 TMPRSS4Q9NRS4 437 aa9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 ABCC13Q9NSE7 274 aa9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 INTS9Q9NV88 658 aaKnown RBP9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 MARCH5Q9NX47 278 aa9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 IGSF9Q9P2J2 1179 aa9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 NEU3Q9UQ49 428 aa9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 SCML2Q9UQR0 700 aa9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 KIAA1671Q9BY89 1806 aa9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 ANAPC1Q9H1A4 1944 aa9.35□□□□□ -0.91
LINCMD1-201ENST00000418518 TMEM120BA0PK00 339 aa9.34□□□□□ -0.91
LINCMD1-201ENST00000418518 FAM72CH0Y354 149 aa9.34□□□□□ -0.91
LINCMD1-201ENST00000418518 NDUFAB1O14561 156 aa9.34□□□□□ -0.91
LINCMD1-201ENST00000418518 TRIM66O15016 1216 aa9.34□□□□□ -0.91
LINCMD1-201ENST00000418518 TBC1D4O60343 1298 aa9.34□□□□□ -0.91
LINCMD1-201ENST00000418518 METTL18O95568 372 aa9.34□□□□□ -0.91
LINCMD1-201ENST00000418518 EFEMP2O95967 443 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms