RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 PIWIL1Q96J94 861 aaKnown RBP13.71□□□□□ -0.21
HLA-DMB-258ENST00000418107 KCNK16Q96T55 309 aa13.71□□□□□ -0.21
HLA-DMB-258ENST00000418107 NELL2Q99435 816 aa13.71□□□□□ -0.21
HLA-DMB-258ENST00000418107 KRT12Q99456 494 aa13.71□□□□□ -0.21
HLA-DMB-258ENST00000418107 NCAPGQ9BPX3 1015 aa13.71□□□□□ -0.21
HLA-DMB-258ENST00000418107 ULBP1Q9BZM6 244 aa13.71□□□□□ -0.21
HLA-DMB-258ENST00000418107 UBXN6Q9BZV1 441 aa13.71□□□□□ -0.21
HLA-DMB-258ENST00000418107 ZCWPW1Q9H0M4 648 aa13.71□□□□□ -0.21
HLA-DMB-258ENST00000418107 EPC1Q9H2F5 836 aa13.71□□□□□ -0.21
HLA-DMB-258ENST00000418107 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.71□□□□□ -0.21
HLA-DMB-258ENST00000418107 PCSK1NQ9UHG2 260 aa13.71□□□□□ -0.21
HLA-DMB-258ENST00000418107 TMEM59LQ9UK28 342 aa13.71□□□□□ -0.21
HLA-DMB-258ENST00000418107 TTC7AQ9ULT0 858 aaPredicted RBP13.71□□□□□ -0.21
HLA-DMB-258ENST00000418107 PCDHB5Q9Y5E4 795 aa13.71□□□□□ -0.21
HLA-DMB-258ENST00000418107 ACACBO00763 2458 aa13.71□□□□□ -0.21
HLA-DMB-258ENST00000418107 SHISA7A6NL88 538 aa13.71□□□□□ -0.22
HLA-DMB-258ENST00000418107 CCDC188H7C350 402 aa13.71□□□□□ -0.22
HLA-DMB-258ENST00000418107 CAPN9O14815 690 aa13.71□□□□□ -0.22
HLA-DMB-258ENST00000418107 NCAM2O15394 837 aa13.71□□□□□ -0.22
HLA-DMB-258ENST00000418107 SART1O43290 800 aaKnown RBP13.71□□□□□ -0.22
HLA-DMB-258ENST00000418107 PRPSAP2O60256 369 aa13.71□□□□□ -0.22
HLA-DMB-258ENST00000418107 HSF2BPO75031 334 aa13.71□□□□□ -0.22
HLA-DMB-258ENST00000418107 CYP2F1P24903 491 aa13.71□□□□□ -0.22
HLA-DMB-258ENST00000418107 RPS9P46781 194 aaKnown RBP13.71□□□□□ -0.22
HLA-DMB-258ENST00000418107 IFRD2Q12894 506 aaPredicted RBP13.71□□□□□ -0.22
HLA-DMB-258ENST00000418107 MTAPQ13126 283 aa13.71□□□□□ -0.22
HLA-DMB-258ENST00000418107 FZD5Q13467 585 aa13.71□□□□□ -0.22
HLA-DMB-258ENST00000418107 LLGL1Q15334 1064 aa13.71□□□□□ -0.22
HLA-DMB-258ENST00000418107 C15orf59Q2T9L4 293 aaPredicted RBP13.71□□□□□ -0.22
HLA-DMB-258ENST00000418107 C8orf74Q6P047 294 aa13.71□□□□□ -0.22
HLA-DMB-258ENST00000418107 ZNF852Q6ZMS4 543 aa13.71□□□□□ -0.22
HLA-DMB-258ENST00000418107 ANKS3Q6ZW76 656 aa13.71□□□□□ -0.22
HLA-DMB-258ENST00000418107 SLC13A5Q86YT5 568 aaPredicted RBP13.71□□□□□ -0.22
HLA-DMB-258ENST00000418107 NDRG1Q92597 394 aaKnown RBP13.71□□□□□ -0.22
HLA-DMB-258ENST00000418107 RNF25Q96BH1 459 aaPredicted RBP13.71□□□□□ -0.22
HLA-DMB-258ENST00000418107 CFAP57Q96MR6 1250 aa13.71□□□□□ -0.22
HLA-DMB-258ENST00000418107 PKMYT1Q99640 499 aa13.71□□□□□ -0.22
HLA-DMB-258ENST00000418107 PRMT8Q9NR22 394 aaPredicted RBP13.71□□□□□ -0.22
HLA-DMB-258ENST00000418107 KLHL11Q9NVR0 708 aa13.71□□□□□ -0.22
HLA-DMB-258ENST00000418107 ARGLU1Q9NWB6 273 aaPredicted RBP13.71□□□□□ -0.22
HLA-DMB-258ENST00000418107 GDE1Q9NZC3 331 aa13.71□□□□□ -0.22
HLA-DMB-258ENST00000418107 USP18Q9UMW8 372 aa13.71□□□□□ -0.22
HLA-DMB-258ENST00000418107 BACE2Q9Y5Z0 518 aa13.71□□□□□ -0.22
HLA-DMB-258ENST00000418107 LRRD1A4D1F6 860 aa13.7□□□□□ -0.22
HLA-DMB-258ENST00000418107 DPYSL4O14531 572 aa13.7□□□□□ -0.22
HLA-DMB-258ENST00000418107 LRCH4O75427 683 aa13.7□□□□□ -0.22
HLA-DMB-258ENST00000418107 DAB1O75553 588 aa13.7□□□□□ -0.22
HLA-DMB-258ENST00000418107 KRT37O76014 449 aa13.7□□□□□ -0.22
HLA-DMB-258ENST00000418107 TRUB2O95900 331 aaKnown RBP13.7□□□□□ -0.22
HLA-DMB-258ENST00000418107 ZBED1O96006 694 aa13.7□□□□□ -0.22
HLA-DMB-258ENST00000418107 USP17L7P0C7H9 530 aa13.7□□□□□ -0.22
HLA-DMB-258ENST00000418107 TCF4P15884 667 aa13.7□□□□□ -0.22
HLA-DMB-258ENST00000418107 MIPP30301 263 aa13.7□□□□□ -0.22
HLA-DMB-258ENST00000418107 CACNA2D1P54289 1103 aa13.7□□□□□ -0.22
HLA-DMB-258ENST00000418107 YWHAZP63104 245 aaKnown RBP13.7□□□□□ -0.22
HLA-DMB-258ENST00000418107 ROR1Q01973 937 aa13.7□□□□□ -0.22
HLA-DMB-258ENST00000418107 ADCY1Q08828 1119 aa13.7□□□□□ -0.22
HLA-DMB-258ENST00000418107 GRM2Q14416 872 aa13.7□□□□□ -0.22
HLA-DMB-258ENST00000418107 PPP2R5EQ16537 467 aa13.7□□□□□ -0.22
HLA-DMB-258ENST00000418107 CCDC14Q49A88 953 aa13.7□□□□□ -0.22
HLA-DMB-258ENST00000418107 ATP13A4Q4VNC1 1196 aa13.7□□□□□ -0.22
HLA-DMB-258ENST00000418107 RTL10Q7L3V2 364 aa13.7□□□□□ -0.22
HLA-DMB-258ENST00000418107 KCTD6Q8NC69 237 aa13.7□□□□□ -0.22
HLA-DMB-258ENST00000418107 ZMIZ2Q8NF64 920 aa13.7□□□□□ -0.22
HLA-DMB-258ENST00000418107 FAM172AQ8WUF8 416 aa13.7□□□□□ -0.22
HLA-DMB-258ENST00000418107 HSPH1Q92598 858 aa13.7□□□□□ -0.22
HLA-DMB-258ENST00000418107 OXCT2Q9BYC2 517 aaPredicted RBP13.7□□□□□ -0.22
HLA-DMB-258ENST00000418107 CSNK1G1Q9HCP0 422 aa13.7□□□□□ -0.22
HLA-DMB-258ENST00000418107 CNGB3Q9NQW8 809 aa13.7□□□□□ -0.22
HLA-DMB-258ENST00000418107 CDV3Q9UKY7 258 aaKnown RBP13.7□□□□□ -0.22
HLA-DMB-258ENST00000418107 NDRG2Q9UN36 371 aaKnown RBP13.7□□□□□ -0.22
HLA-DMB-258ENST00000418107 MRPS17Q9Y2R5 130 aaKnown RBP13.7□□□□□ -0.22
HLA-DMB-258ENST00000418107 DCDC2BA2VCK2 349 aa13.69□□□□□ -0.22
HLA-DMB-258ENST00000418107 NRG2O14511 850 aaPredicted RBP13.69□□□□□ -0.22
HLA-DMB-258ENST00000418107 PRRG1O14668 218 aa13.69□□□□□ -0.22
HLA-DMB-258ENST00000418107 LRG1P02750 347 aa13.69□□□□□ -0.22
HLA-DMB-258ENST00000418107 GLI1P08151 1106 aa13.69□□□□□ -0.22
HLA-DMB-258ENST00000418107 PTPN2P17706 415 aa13.69□□□□□ -0.22
HLA-DMB-258ENST00000418107 SDHBP21912 280 aa13.69□□□□□ -0.22
HLA-DMB-258ENST00000418107 TGM1P22735 817 aa13.69□□□□□ -0.22
HLA-DMB-258ENST00000418107 FCARP24071 287 aa13.69□□□□□ -0.22
HLA-DMB-258ENST00000418107 MCM3P25205 808 aa13.69□□□□□ -0.22
HLA-DMB-258ENST00000418107 PCK1P35558 622 aa13.69□□□□□ -0.22
HLA-DMB-258ENST00000418107 PTPN9P43378 593 aa13.69□□□□□ -0.22
HLA-DMB-258ENST00000418107 SULT1E1P49888 294 aa13.69□□□□□ -0.22
HLA-DMB-258ENST00000418107 DAOAP59103 153 aa13.69□□□□□ -0.22
HLA-DMB-258ENST00000418107 LMNB2Q03252 620 aa13.69□□□□□ -0.22
HLA-DMB-258ENST00000418107 MRPL58Q14197 206 aaKnown RBP13.69□□□□□ -0.22
HLA-DMB-258ENST00000418107 SMTNL2Q2TAL5 461 aa13.69□□□□□ -0.22
HLA-DMB-258ENST00000418107 GLE1Q53GS7 698 aaKnown RBP13.69□□□□□ -0.22
HLA-DMB-258ENST00000418107 DCAF6Q58WW2 860 aa13.69□□□□□ -0.22
HLA-DMB-258ENST00000418107 ARCQ7LC44 396 aa13.69□□□□□ -0.22
HLA-DMB-258ENST00000418107 GPRIN1Q7Z2K8 1008 aa13.69□□□□□ -0.22
HLA-DMB-258ENST00000418107 POLNQ7Z5Q5 900 aa13.69□□□□□ -0.22
HLA-DMB-258ENST00000418107 DEFB106AQ8N104 65 aa13.69□□□□□ -0.22
HLA-DMB-258ENST00000418107 CCDC26Q8TAB7 109 aa13.69□□□□□ -0.22
HLA-DMB-258ENST00000418107 DNASE1L2Q92874 299 aa13.69□□□□□ -0.22
HLA-DMB-258ENST00000418107 ELSPBP1Q96BH3 223 aa13.69□□□□□ -0.22
HLA-DMB-258ENST00000418107 TCEAL4Q96EI5 215 aa13.69□□□□□ -0.22
HLA-DMB-258ENST00000418107 FUBP3Q96I24 572 aaKnown RBP eCLIP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms