RNA–Protein interactions for RNA: ENST00000417658.5

PRPF18-203, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 1,062 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-203ENST00000417658 GRK6P43250 576 aa17.1■□□□□ 0.33
PRPF18-203ENST00000417658 GRIA4P48058 902 aa17.1■□□□□ 0.33
PRPF18-203ENST00000417658 ARID5AQ03989 594 aa17.1■□□□□ 0.33
PRPF18-203ENST00000417658 ZBTB16Q05516 673 aa17.1■□□□□ 0.33
PRPF18-203ENST00000417658 CYP4F3Q08477 520 aa17.1■□□□□ 0.33
PRPF18-203ENST00000417658 SMAD1Q15797 465 aaKnown RBP17.1■□□□□ 0.33
PRPF18-203ENST00000417658 PTPRNQ16849 979 aa17.1■□□□□ 0.33
PRPF18-203ENST00000417658 C1orf220Q5T0J3 134 aa17.1■□□□□ 0.33
PRPF18-203ENST00000417658 PPP1R26Q5T8A7 1209 aaPredicted RBP17.1■□□□□ 0.33
PRPF18-203ENST00000417658 FAM124AQ86V42 546 aa17.1■□□□□ 0.33
PRPF18-203ENST00000417658 KIAA0895Q8NCT3 520 aa17.1■□□□□ 0.33
PRPF18-203ENST00000417658 ENGASEQ8NFI3 743 aa17.1■□□□□ 0.33
PRPF18-203ENST00000417658 SORCS1Q8WY21 1168 aa17.1■□□□□ 0.33
PRPF18-203ENST00000417658 IGSF8Q969P0 613 aa17.1■□□□□ 0.33
PRPF18-203ENST00000417658 BBC3Q96PG8 261 aaPredicted RBP17.1■□□□□ 0.33
PRPF18-203ENST00000417658 C6orf106Q9H6K1 298 aaPredicted RBP17.1■□□□□ 0.33
PRPF18-203ENST00000417658 FBRSQ9HAH7 460 aa17.1■□□□□ 0.33
PRPF18-203ENST00000417658 FAM13BQ9NYF5 915 aa17.1■□□□□ 0.33
PRPF18-203ENST00000417658 PLA2G4CQ9UP65 541 aa17.1■□□□□ 0.33
PRPF18-203ENST00000417658 BTBD3Q9Y2F9 522 aa17.1■□□□□ 0.33
PRPF18-203ENST00000417658 ANKRD6Q9Y2G4 727 aa17.1■□□□□ 0.33
PRPF18-203ENST00000417658 SNX11Q9Y5W9 270 aa17.1■□□□□ 0.33
PRPF18-203ENST00000417658 NUMA1Q14980 2115 aa17.09■□□□□ 0.33
PRPF18-203ENST00000417658 EIF4E1BA6NMX2 242 aaKnown RBP17.09■□□□□ 0.33
PRPF18-203ENST00000417658 KLRC4O43908 158 aa17.09■□□□□ 0.33
PRPF18-203ENST00000417658 DFNA5O60443 496 aa17.09■□□□□ 0.33
PRPF18-203ENST00000417658 KIF20AO95235 890 aa17.09■□□□□ 0.33
PRPF18-203ENST00000417658 HMBSP08397 361 aa17.09■□□□□ 0.33
PRPF18-203ENST00000417658 ACSL1P33121 698 aa17.09■□□□□ 0.33
PRPF18-203ENST00000417658 VAMP7P51809 220 aa17.09■□□□□ 0.33
PRPF18-203ENST00000417658 MPPE1Q53F39 396 aa17.09■□□□□ 0.33
PRPF18-203ENST00000417658 PLD4Q96BZ4 506 aa17.09■□□□□ 0.33
PRPF18-203ENST00000417658 FAXDC2Q96IV6 333 aa17.09■□□□□ 0.33
PRPF18-203ENST00000417658 NIF3L1Q9GZT8 377 aa17.09■□□□□ 0.33
PRPF18-203ENST00000417658 LHX5Q9H2C1 402 aa17.09■□□□□ 0.33
PRPF18-203ENST00000417658 TMEM245Q9H330 911 aa17.09■□□□□ 0.33
PRPF18-203ENST00000417658 APOBEC3GQ9HC16 384 aaKnown RBP17.09■□□□□ 0.33
PRPF18-203ENST00000417658 TM9SF3Q9HD45 589 aa17.09■□□□□ 0.33
PRPF18-203ENST00000417658 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.09■□□□□ 0.33
PRPF18-203ENST00000417658 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.08■□□□□ 0.32
PRPF18-203ENST00000417658 SLC12A8A0AV02 714 aa17.08■□□□□ 0.32
PRPF18-203ENST00000417658 GOLGA8CPA6NN73 597 aa17.08■□□□□ 0.32
PRPF18-203ENST00000417658 TSPAN3O60637 253 aa17.08■□□□□ 0.32
PRPF18-203ENST00000417658 SLFN14P0C7P3 912 aa17.08■□□□□ 0.32
PRPF18-203ENST00000417658 CD27P26842 260 aa17.08■□□□□ 0.32
PRPF18-203ENST00000417658 ZNF445P59923 1031 aa17.08■□□□□ 0.32
PRPF18-203ENST00000417658 ENPEPQ07075 957 aa17.08■□□□□ 0.32
PRPF18-203ENST00000417658 TRIP4Q15650 581 aaPredicted RBP17.08■□□□□ 0.32
PRPF18-203ENST00000417658 RAB41Q5JT25 222 aa17.08■□□□□ 0.32
PRPF18-203ENST00000417658 RESP18Q5W5W9 173 aa17.08■□□□□ 0.32
PRPF18-203ENST00000417658 CEP135Q66GS9 1140 aa17.08■□□□□ 0.32
PRPF18-203ENST00000417658 RSRC2Q7L4I2 434 aaKnown RBP17.08■□□□□ 0.32
PRPF18-203ENST00000417658 CEP57L1Q8IYX8 460 aa17.08■□□□□ 0.32
PRPF18-203ENST00000417658 TTC39CQ8N584 583 aa17.08■□□□□ 0.32
PRPF18-203ENST00000417658 TAS1R2Q8TE23 839 aa17.08■□□□□ 0.32
PRPF18-203ENST00000417658 WFIKKN2Q8TEU8 576 aa17.08■□□□□ 0.32
PRPF18-203ENST00000417658 SNX19Q92543 992 aa17.08■□□□□ 0.32
PRPF18-203ENST00000417658 BIRC7Q96CA5 298 aa17.08■□□□□ 0.32
PRPF18-203ENST00000417658 HEXIM2Q96MH2 286 aaKnown RBP17.08■□□□□ 0.32
PRPF18-203ENST00000417658 BTBD1Q9H0C5 482 aa17.08■□□□□ 0.32
PRPF18-203ENST00000417658 EXOC1Q9NV70 894 aa17.08■□□□□ 0.32
PRPF18-203ENST00000417658 SLCO1B1Q9Y6L6 691 aa17.08■□□□□ 0.32
PRPF18-203ENST00000417658 SMG1Q96Q15 3661 aaKnown RBP17.08■□□□□ 0.32
PRPF18-203ENST00000417658 PAPSS1O43252 624 aaPredicted RBP17.07■□□□□ 0.32
PRPF18-203ENST00000417658 SEMA4FO95754 770 aa17.07■□□□□ 0.32
PRPF18-203ENST00000417658 PDIA4P13667 645 aaKnown RBP17.07■□□□□ 0.32
PRPF18-203ENST00000417658 HLA-EP13747 358 aa17.07■□□□□ 0.32
PRPF18-203ENST00000417658 CD58P19256 250 aa17.07■□□□□ 0.32
PRPF18-203ENST00000417658 HOXD9P28356 352 aaPredicted RBP17.07■□□□□ 0.32
PRPF18-203ENST00000417658 HLA-FP30511 346 aa17.07■□□□□ 0.32
PRPF18-203ENST00000417658 HARS2P49590 506 aaKnown RBP17.07■□□□□ 0.32
PRPF18-203ENST00000417658 YWHAGP61981 247 aaKnown RBP eCLIP17.07■□□□□ 0.32
PRPF18-203ENST00000417658 PM20D1Q6GTS8 502 aa17.07■□□□□ 0.32
PRPF18-203ENST00000417658 INTS8Q75QN2 995 aaKnown RBP17.07■□□□□ 0.32
PRPF18-203ENST00000417658 TMPRSS12Q86WS5 348 aa17.07■□□□□ 0.32
PRPF18-203ENST00000417658 CACUL1Q86Y37 369 aa17.07■□□□□ 0.32
PRPF18-203ENST00000417658 MARCH9Q86YJ5 346 aa17.07■□□□□ 0.32
PRPF18-203ENST00000417658 CCDC150Q8NCX0 1101 aa17.07■□□□□ 0.32
PRPF18-203ENST00000417658 SGK2Q9HBY8 427 aa17.07■□□□□ 0.32
PRPF18-203ENST00000417658 STOML2Q9UJZ1 356 aa17.07■□□□□ 0.32
PRPF18-203ENST00000417658 PCDHA7Q9UN72 937 aa17.07■□□□□ 0.32
PRPF18-203ENST00000417658 TRAF3IP3Q9Y228 551 aa17.07■□□□□ 0.32
PRPF18-203ENST00000417658 CALUO43852 315 aaPredicted RBP17.06■□□□□ 0.32
PRPF18-203ENST00000417658 ANP32AP39687 249 aaKnown RBP17.06■□□□□ 0.32
PRPF18-203ENST00000417658 GCLMP48507 274 aa17.06■□□□□ 0.32
PRPF18-203ENST00000417658 CCT8P50990 548 aa17.06■□□□□ 0.32
PRPF18-203ENST00000417658 SLC8A3P57103 927 aa17.06■□□□□ 0.32
PRPF18-203ENST00000417658 INAVAQ3KP66 663 aa17.06■□□□□ 0.32
PRPF18-203ENST00000417658 KMT5BQ4FZB7 885 aa17.06■□□□□ 0.32
PRPF18-203ENST00000417658 FNDC3BQ53EP0 1204 aaKnown RBP17.06■□□□□ 0.32
PRPF18-203ENST00000417658 KIAA0907Q7Z7F0 614 aaPredicted RBP17.06■□□□□ 0.32
PRPF18-203ENST00000417658 PIGZQ86VD9 579 aa17.06■□□□□ 0.32
PRPF18-203ENST00000417658 GRAMD1CQ8IYS0 662 aa17.06■□□□□ 0.32
PRPF18-203ENST00000417658 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.06■□□□□ 0.32
PRPF18-203ENST00000417658 GOLGA1Q92805 767 aa17.06■□□□□ 0.32
PRPF18-203ENST00000417658 TMA16Q96EY4 203 aaKnown RBP17.06■□□□□ 0.32
PRPF18-203ENST00000417658 PAGE5Q96GU1 130 aa17.06■□□□□ 0.32
PRPF18-203ENST00000417658 OLA1Q9NTK5 396 aaKnown RBP17.06■□□□□ 0.32
PRPF18-203ENST00000417658 HBS1LQ9Y450 684 aaKnown RBP17.06■□□□□ 0.32
PRPF18-203ENST00000417658 HELZ2Q9BYK8 2649 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms