RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 MSANTD2Q6P1R3 559 aa26.42■■□□□ 1.82
VEGFA-208ENST00000417285 SLC23A3Q6PIS1 610 aa26.42■■□□□ 1.82
VEGFA-208ENST00000417285 ARHGEF19Q8IW93 802 aa26.42■■□□□ 1.82
VEGFA-208ENST00000417285 ZSWIM1Q9BR11 485 aa26.42■■□□□ 1.82
VEGFA-208ENST00000417285 INTS2Q9H0H0 1204 aaKnown RBP26.42■■□□□ 1.82
VEGFA-208ENST00000417285 RAD54BQ9Y620 910 aa26.42■■□□□ 1.82
VEGFA-208ENST00000417285 CEP295Q9C0D2 2601 aa26.42■■□□□ 1.82
VEGFA-208ENST00000417285 CDX4O14627 284 aaPredicted RBP26.41■■□□□ 1.82
VEGFA-208ENST00000417285 SYNCRIPO60506 623 aaKnown RBP26.41■■□□□ 1.82
VEGFA-208ENST00000417285 ITPKAP23677 461 aa26.41■■□□□ 1.82
VEGFA-208ENST00000417285 BRD2P25440 801 aaKnown RBP26.41■■□□□ 1.82
VEGFA-208ENST00000417285 ZNF33AQ06730 810 aa26.41■■□□□ 1.82
VEGFA-208ENST00000417285 DUOXA1Q1HG43 343 aa26.41■■□□□ 1.82
VEGFA-208ENST00000417285 MLKLQ8NB16 471 aa26.41■■□□□ 1.82
VEGFA-208ENST00000417285 NUP205Q92621 2012 aa26.41■■□□□ 1.82
VEGFA-208ENST00000417285 NDUFS2O75306 463 aa26.4■■□□□ 1.82
VEGFA-208ENST00000417285 GABBR2O75899 941 aa26.4■■□□□ 1.82
VEGFA-208ENST00000417285 LTFP02788 710 aa26.4■■□□□ 1.82
VEGFA-208ENST00000417285 SLC11A2P49281 568 aa26.4■■□□□ 1.82
VEGFA-208ENST00000417285 ARID5AQ03989 594 aa26.4■■□□□ 1.82
VEGFA-208ENST00000417285 CREBRFQ8IUR6 639 aa26.4■■□□□ 1.82
VEGFA-208ENST00000417285 AZIN2Q96A70 460 aa26.4■■□□□ 1.82
VEGFA-208ENST00000417285 FAM81BQ96LP2 452 aa26.4■■□□□ 1.82
VEGFA-208ENST00000417285 CNTNAP3BQ96NU0 1288 aa26.4■■□□□ 1.82
VEGFA-208ENST00000417285 CNTNAP3Q9BZ76 1288 aa26.4■■□□□ 1.82
VEGFA-208ENST00000417285 PRDM16Q9HAZ2 1276 aa26.4■■□□□ 1.82
VEGFA-208ENST00000417285 CLEC4EQ9ULY5 219 aa26.4■■□□□ 1.82
VEGFA-208ENST00000417285 SLC6A14Q9UN76 642 aa26.4■■□□□ 1.82
VEGFA-208ENST00000417285 CYP8B1Q9UNU6 501 aa26.4■■□□□ 1.82
VEGFA-208ENST00000417285 SART1O43290 800 aaKnown RBP26.39■■□□□ 1.82
VEGFA-208ENST00000417285 RING1Q06587 406 aa26.39■■□□□ 1.82
VEGFA-208ENST00000417285 FUT11Q495W5 492 aa26.39■■□□□ 1.82
VEGFA-208ENST00000417285 MPP7Q5T2T1 576 aa26.39■■□□□ 1.82
VEGFA-208ENST00000417285 NUGGCQ68CJ6 796 aa26.39■■□□□ 1.82
VEGFA-208ENST00000417285 ENOSF1Q7L5Y1 443 aa26.39■■□□□ 1.82
VEGFA-208ENST00000417285 STK32AQ8WU08 396 aa26.39■■□□□ 1.82
VEGFA-208ENST00000417285 FOXJ1Q92949 421 aa26.39■■□□□ 1.82
VEGFA-208ENST00000417285 ZNF419Q96HQ0 510 aaPredicted RBP26.39■■□□□ 1.82
VEGFA-208ENST00000417285 KREMEN1Q96MU8 473 aa26.39■■□□□ 1.82
VEGFA-208ENST00000417285 CIPCQ9C0C6 399 aa26.39■■□□□ 1.82
VEGFA-208ENST00000417285 CLSTN2Q9H4D0 955 aa26.39■■□□□ 1.82
VEGFA-208ENST00000417285 UBE2TQ9NPD8 197 aaPredicted RBP26.39■■□□□ 1.82
VEGFA-208ENST00000417285 ITM2CQ9NQX7 267 aa26.39■■□□□ 1.82
VEGFA-208ENST00000417285 PLA2G4CQ9UP65 541 aa26.39■■□□□ 1.82
VEGFA-208ENST00000417285 IRAK2O43187 625 aa26.38■■□□□ 1.81
VEGFA-208ENST00000417285 MED7O43513 233 aa26.38■■□□□ 1.81
VEGFA-208ENST00000417285 TSPAN3O60637 253 aa26.38■■□□□ 1.81
VEGFA-208ENST00000417285 SERPINF2P08697 491 aa26.38■■□□□ 1.81
VEGFA-208ENST00000417285 KRT5P13647 590 aa26.38■■□□□ 1.81
VEGFA-208ENST00000417285 CSRP1P21291 193 aaKnown RBP26.38■■□□□ 1.81
VEGFA-208ENST00000417285 HOXD9P28356 352 aaPredicted RBP26.38■■□□□ 1.81
VEGFA-208ENST00000417285 IL12RB1P42701 662 aa26.38■■□□□ 1.81
VEGFA-208ENST00000417285 ACADSBP45954 432 aa26.38■■□□□ 1.81
VEGFA-208ENST00000417285 RPL34P49207 117 aaKnown RBP26.38■■□□□ 1.81
VEGFA-208ENST00000417285 GFPT1Q06210 699 aaPredicted RBP26.38■■□□□ 1.81
VEGFA-208ENST00000417285 ZNF234Q14588 700 aa26.38■■□□□ 1.81
VEGFA-208ENST00000417285 MEA1Q16626 185 aa26.38■■□□□ 1.81
VEGFA-208ENST00000417285 SYCP2LQ5T4T6 812 aa26.38■■□□□ 1.81
VEGFA-208ENST00000417285 KIAA1324Q6UXG2 1013 aaKnown RBP26.38■■□□□ 1.81
VEGFA-208ENST00000417285 DEFB119Q8N690 84 aa26.38■■□□□ 1.81
VEGFA-208ENST00000417285 ZNF557Q8N988 423 aaPredicted RBP26.38■■□□□ 1.81
VEGFA-208ENST00000417285 WFIKKN2Q8TEU8 576 aa26.38■■□□□ 1.81
VEGFA-208ENST00000417285 ERLEC1Q96DZ1 483 aa26.38■■□□□ 1.81
VEGFA-208ENST00000417285 TRIM62Q9BVG3 475 aa26.38■■□□□ 1.81
VEGFA-208ENST00000417285 PLXND1Q9Y4D7 1925 aa26.37■■□□□ 1.81
VEGFA-208ENST00000417285 MSI1O43347 362 aaKnown RBP26.37■■□□□ 1.81
VEGFA-208ENST00000417285 IGLV3-27P01718 113 aa26.37■■□□□ 1.81
VEGFA-208ENST00000417285 CFIP05156 583 aa26.37■■□□□ 1.81
VEGFA-208ENST00000417285 ENGP17813 658 aa26.37■■□□□ 1.81
VEGFA-208ENST00000417285 OXTRP30559 389 aa26.37■■□□□ 1.81
VEGFA-208ENST00000417285 GPD2P43304 727 aa26.37■■□□□ 1.81
VEGFA-208ENST00000417285 TPD52L1Q16890 204 aaPredicted RBP26.37■■□□□ 1.81
VEGFA-208ENST00000417285 PSAPL1Q6NUJ1 521 aa26.37■■□□□ 1.81
VEGFA-208ENST00000417285 SCUBE3Q8IX30 993 aa26.37■■□□□ 1.81
VEGFA-208ENST00000417285 DDX50Q9BQ39 737 aaKnown RBP26.37■■□□□ 1.81
VEGFA-208ENST00000417285 ANGPTL2Q9UKU9 493 aa26.37■■□□□ 1.81
VEGFA-208ENST00000417285 PIK3R2O00459 728 aa26.36■■□□□ 1.81
VEGFA-208ENST00000417285 NCAM1P13591 858 aa26.36■■□□□ 1.81
VEGFA-208ENST00000417285 CEACAM1P13688 526 aa26.36■■□□□ 1.81
VEGFA-208ENST00000417285 PMLP29590 882 aa26.36■■□□□ 1.81
VEGFA-208ENST00000417285 CD6P30203 668 aa26.36■■□□□ 1.81
VEGFA-208ENST00000417285 NOVA1P51513 510 aaKnown RBP26.36■■□□□ 1.81
VEGFA-208ENST00000417285 TBX4P57082 545 aa26.36■■□□□ 1.81
VEGFA-208ENST00000417285 SMYD5Q6GMV2 418 aa26.36■■□□□ 1.81
VEGFA-208ENST00000417285 SERPINA13PQ6UXR4 307 aa26.36■■□□□ 1.81
VEGFA-208ENST00000417285 BEND5Q7L4P6 421 aa26.36■■□□□ 1.81
VEGFA-208ENST00000417285 TMPRSS6Q8IU80 811 aa26.36■■□□□ 1.81
VEGFA-208ENST00000417285 MKRN2Q9H000 416 aaKnown RBP26.36■■□□□ 1.81
VEGFA-208ENST00000417285 MIS12Q9H081 205 aa26.36■■□□□ 1.81
VEGFA-208ENST00000417285 SLC6A17Q9H1V8 727 aa26.36■■□□□ 1.81
VEGFA-208ENST00000417285 ACSL4O60488 711 aa26.35■■□□□ 1.81
VEGFA-208ENST00000417285 CALCAP01258 141 aa26.35■■□□□ 1.81
VEGFA-208ENST00000417285 ATXN3P54252 364 aaPredicted RBP26.35■■□□□ 1.81
VEGFA-208ENST00000417285 SHC2P98077 582 aa26.35■■□□□ 1.81
VEGFA-208ENST00000417285 UAP1L1Q3KQV9 507 aa26.35■■□□□ 1.81
VEGFA-208ENST00000417285 WDR45BQ5MNZ6 344 aa26.35■■□□□ 1.81
VEGFA-208ENST00000417285 TMEM215Q68D42 235 aa26.35■■□□□ 1.81
VEGFA-208ENST00000417285 GBP6Q6ZN66 633 aa26.35■■□□□ 1.81
VEGFA-208ENST00000417285 KIAA0907Q7Z7F0 614 aaPredicted RBP26.35■■□□□ 1.81
VEGFA-208ENST00000417285 SLC41A1Q8IVJ1 513 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms