RNA–Protein interactions for RNA: ENST00000417268.3

SCAF8-203, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-203ENST00000417268 B4GALT4O60513 344 aa13.18□□□□□ -0.3
SCAF8-203ENST00000417268 XYLBO75191 536 aa13.18□□□□□ -0.3
SCAF8-203ENST00000417268 DEAF1O75398 565 aaPredicted RBP13.18□□□□□ -0.3
SCAF8-203ENST00000417268 ANXA9O76027 345 aa13.18□□□□□ -0.3
SCAF8-203ENST00000417268 ESRRBO95718 433 aa13.18□□□□□ -0.3
SCAF8-203ENST00000417268 MARSP56192 900 aaKnown RBP13.18□□□□□ -0.3
SCAF8-203ENST00000417268 NCLNQ969V3 563 aa13.18□□□□□ -0.3
SCAF8-203ENST00000417268 LENG9Q96B70 501 aa13.18□□□□□ -0.3
SCAF8-203ENST00000417268 ADNPQ9H2P0 1102 aa13.18□□□□□ -0.3
SCAF8-203ENST00000417268 ASS1P00966 412 aaKnown RBP13.18□□□□□ -0.3
SCAF8-203ENST00000417268 MYL2P10916 166 aa13.18□□□□□ -0.3
SCAF8-203ENST00000417268 SLC34A1Q06495 639 aa13.18□□□□□ -0.3
SCAF8-203ENST00000417268 UGP2Q16851 508 aa13.18□□□□□ -0.3
SCAF8-203ENST00000417268 IRGCQ6NXR0 463 aa13.18□□□□□ -0.3
SCAF8-203ENST00000417268 ANKS3Q6ZW76 656 aa13.18□□□□□ -0.3
SCAF8-203ENST00000417268 UCMAQ8WVF2 138 aa13.18□□□□□ -0.3
SCAF8-203ENST00000417268 SERPINB11Q96P15 392 aa13.18□□□□□ -0.3
SCAF8-203ENST00000417268 SIKE1Q9BRV8 207 aa13.18□□□□□ -0.3
SCAF8-203ENST00000417268 KCNJ2P63252 427 aa13.18□□□□□ -0.3
SCAF8-203ENST00000417268 SLC6A3Q01959 620 aa13.18□□□□□ -0.3
SCAF8-203ENST00000417268 ARHGAP1Q07960 439 aa13.18□□□□□ -0.3
SCAF8-203ENST00000417268 CCDC15Q0P6D6 951 aa13.18□□□□□ -0.3
SCAF8-203ENST00000417268 LRRC8DQ7L1W4 858 aa13.18□□□□□ -0.3
SCAF8-203ENST00000417268 FAM71AQ8IYT1 594 aa13.18□□□□□ -0.3
SCAF8-203ENST00000417268 FAM71DQ8N9W8 422 aa13.18□□□□□ -0.3
SCAF8-203ENST00000417268 EDEM1Q92611 657 aa13.18□□□□□ -0.3
SCAF8-203ENST00000417268 HSFY1Q96LI6 401 aa13.18□□□□□ -0.3
SCAF8-203ENST00000417268 C20orf96Q9NUD7 363 aaPredicted RBP13.18□□□□□ -0.3
SCAF8-203ENST00000417268 ACAP1Q15027 740 aa13.17□□□□□ -0.3
SCAF8-203ENST00000417268 MAPRE2Q15555 327 aa13.17□□□□□ -0.3
SCAF8-203ENST00000417268 C16orf89Q6UX73 402 aa13.17□□□□□ -0.3
SCAF8-203ENST00000417268 HERC6Q8IVU3 1022 aa13.17□□□□□ -0.3
SCAF8-203ENST00000417268 SCUBE3Q8IX30 993 aa13.17□□□□□ -0.3
SCAF8-203ENST00000417268 SARS2Q9NP81 518 aaKnown RBP13.17□□□□□ -0.3
SCAF8-203ENST00000417268 RIPK2O43353 540 aa13.17□□□□□ -0.3
SCAF8-203ENST00000417268 CREMQ03060 361 aa13.17□□□□□ -0.3
SCAF8-203ENST00000417268 FLOT2Q14254 428 aa13.17□□□□□ -0.3
SCAF8-203ENST00000417268 TIGD7Q6NT04 549 aaPredicted RBP13.17□□□□□ -0.3
SCAF8-203ENST00000417268 DDHD1Q8NEL9 900 aa13.17□□□□□ -0.3
SCAF8-203ENST00000417268 APBB2Q92870 758 aa13.17□□□□□ -0.3
SCAF8-203ENST00000417268 USP13Q92995 863 aaPredicted RBP13.17□□□□□ -0.3
SCAF8-203ENST00000417268 BHMTQ93088 406 aa13.17□□□□□ -0.3
SCAF8-203ENST00000417268 PGM2Q96G03 612 aa13.17□□□□□ -0.3
SCAF8-203ENST00000417268 GPATCH2LQ9NWQ4 482 aa13.17□□□□□ -0.3
SCAF8-203ENST00000417268 WHRNQ9P202 907 aa13.17□□□□□ -0.3
SCAF8-203ENST00000417268 MSRAQ9UJ68 235 aa13.17□□□□□ -0.3
SCAF8-203ENST00000417268 MCM8Q9UJA3 840 aa13.17□□□□□ -0.3
SCAF8-203ENST00000417268 SLC30A1Q9Y6M5 507 aa13.17□□□□□ -0.3
SCAF8-203ENST00000417268 SRRM3A6NNA2 597 aaPredicted RBP13.17□□□□□ -0.3
SCAF8-203ENST00000417268 SNX2O60749 519 aa13.17□□□□□ -0.3
SCAF8-203ENST00000417268 SPAG6O75602 509 aa13.17□□□□□ -0.3
SCAF8-203ENST00000417268 CCDC130P13994 396 aa13.17□□□□□ -0.3
SCAF8-203ENST00000417268 PABPC1LQ4VXU2 614 aaKnown RBP13.17□□□□□ -0.3
SCAF8-203ENST00000417268 IYDQ6PHW0 289 aa13.17□□□□□ -0.3
SCAF8-203ENST00000417268 IPMKQ8NFU5 416 aa13.17□□□□□ -0.3
SCAF8-203ENST00000417268 DDI1Q8WTU0 396 aa13.17□□□□□ -0.3
SCAF8-203ENST00000417268 C18orf25Q96B23 403 aaPredicted RBP13.17□□□□□ -0.3
SCAF8-203ENST00000417268 CINPQ9BW66 212 aaPredicted RBP13.17□□□□□ -0.3
SCAF8-203ENST00000417268 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.17□□□□□ -0.32e-13■■■■□ 20.3
SCAF8-203ENST00000417268 NAALADL1Q9UQQ1 740 aa13.17□□□□□ -0.3
SCAF8-203ENST00000417268 CBX6O95503 412 aa13.17□□□□□ -0.3
SCAF8-203ENST00000417268 APOA1P02647 267 aa13.17□□□□□ -0.3
SCAF8-203ENST00000417268 KCNA4P22459 653 aa13.17□□□□□ -0.3
SCAF8-203ENST00000417268 TBX4P57082 545 aa13.17□□□□□ -0.3
SCAF8-203ENST00000417268 ARHGEF7Q14155 803 aa13.17□□□□□ -0.3
SCAF8-203ENST00000417268 DCUN1D1Q96GG9 259 aa13.17□□□□□ -0.3
SCAF8-203ENST00000417268 RNPEPL1Q9HAU8 725 aa13.17□□□□□ -0.3
SCAF8-203ENST00000417268 XPNPEP1Q9NQW7 623 aa13.17□□□□□ -0.3
SCAF8-203ENST00000417268 TRIM49D1C9J1S8 452 aa13.16□□□□□ -0.3
SCAF8-203ENST00000417268 DGKIO75912 1065 aa13.16□□□□□ -0.3
SCAF8-203ENST00000417268 FDFT1P37268 417 aa13.16□□□□□ -0.3
SCAF8-203ENST00000417268 POLD3Q15054 466 aaPredicted RBP13.16□□□□□ -0.3
SCAF8-203ENST00000417268 PCSK7Q16549 785 aa13.16□□□□□ -0.3
SCAF8-203ENST00000417268 USP41Q3LFD5 358 aa13.16□□□□□ -0.3
SCAF8-203ENST00000417268 FASTKD1Q53R41 847 aaKnown RBP13.16□□□□□ -0.3
SCAF8-203ENST00000417268 PPM1LQ5SGD2 360 aa13.16□□□□□ -0.3
SCAF8-203ENST00000417268 SPOCD1Q6ZMY3 1216 aa13.16□□□□□ -0.3
SCAF8-203ENST00000417268 LINC00523Q86TU6 105 aa13.16□□□□□ -0.3
SCAF8-203ENST00000417268 B3GALNT2Q8NCR0 500 aa13.16□□□□□ -0.3
SCAF8-203ENST00000417268 CYGBQ8WWM9 190 aa13.16□□□□□ -0.3
SCAF8-203ENST00000417268 NTPCRQ9BSD7 190 aaKnown RBP13.16□□□□□ -0.3
SCAF8-203ENST00000417268 GID8Q9NWU2 228 aa13.16□□□□□ -0.3
SCAF8-203ENST00000417268 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.16□□□□□ -0.3
SCAF8-203ENST00000417268 E5RJQ4 531 aa13.16□□□□□ -0.3
SCAF8-203ENST00000417268 LTFP02788 710 aa13.16□□□□□ -0.3
SCAF8-203ENST00000417268 NPR3P17342 541 aa13.16□□□□□ -0.3
SCAF8-203ENST00000417268 ACLYP53396 1101 aa13.16□□□□□ -0.3
SCAF8-203ENST00000417268 CCDC149Q6ZUS6 474 aa13.16□□□□□ -0.3
SCAF8-203ENST00000417268 SAPCD2Q86UD0 394 aa13.16□□□□□ -0.3
SCAF8-203ENST00000417268 MRPL1Q9BYD6 325 aaKnown RBP13.16□□□□□ -0.3
SCAF8-203ENST00000417268 GANQ9H2C0 597 aa13.16□□□□□ -0.3
SCAF8-203ENST00000417268 NCAM2O15394 837 aa13.16□□□□□ -0.3
SCAF8-203ENST00000417268 C22orf31O95567 290 aa13.16□□□□□ -0.3
SCAF8-203ENST00000417268 KRT75O95678 551 aa13.16□□□□□ -0.3
SCAF8-203ENST00000417268 SERPINB10P48595 397 aa13.16□□□□□ -0.3
SCAF8-203ENST00000417268 AMPD2Q01433 879 aa13.16□□□□□ -0.3
SCAF8-203ENST00000417268 RASA2Q15283 850 aa13.16□□□□□ -0.3
SCAF8-203ENST00000417268 ERMARDQ5T6L9 678 aa13.16□□□□□ -0.3
SCAF8-203ENST00000417268 PPIL6Q8IXY8 311 aa13.16□□□□□ -0.3
SCAF8-203ENST00000417268 DEFB106AQ8N104 65 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms