RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 ZC3H12AQ5D1E8 599 aaKnown RBP24■■□□□ 1.43
SMARCB1-205ENST00000417137 TMEM196Q5HYL7 178 aa24■■□□□ 1.43
SMARCB1-205ENST00000417137 DNAJC24Q6P3W2 148 aa24■■□□□ 1.43
SMARCB1-205ENST00000417137 FAM217AQ8IXS0 508 aa24■■□□□ 1.43
SMARCB1-205ENST00000417137 OLIG1Q8TAK6 271 aa24■■□□□ 1.43
SMARCB1-205ENST00000417137 NT5C3BQ969T7 300 aa24■■□□□ 1.43
SMARCB1-205ENST00000417137 BTN2A3PQ96KV6 586 aa24■■□□□ 1.43
SMARCB1-205ENST00000417137 LMAN1LQ9HAT1 526 aa24■■□□□ 1.43
SMARCB1-205ENST00000417137 ABHD10Q9NUJ1 306 aa24■■□□□ 1.43
SMARCB1-205ENST00000417137 TAS2R14Q9NYV8 317 aa24■■□□□ 1.43
SMARCB1-205ENST00000417137 COX16Q9P0S2 106 aa24■■□□□ 1.43
SMARCB1-205ENST00000417137 NEDD8-MDP1E9PL57 170 aa23.99■■□□□ 1.43
SMARCB1-205ENST00000417137 PDGFRAP16234 1089 aa23.99■■□□□ 1.43
SMARCB1-205ENST00000417137 FLT3P36888 993 aa23.99■■□□□ 1.43
SMARCB1-205ENST00000417137 RPS9P46781 194 aaKnown RBP23.99■■□□□ 1.43
SMARCB1-205ENST00000417137 ADKP55263 362 aaKnown RBP23.99■■□□□ 1.43
SMARCB1-205ENST00000417137 PITX1P78337 314 aaPredicted RBP23.99■■□□□ 1.43
SMARCB1-205ENST00000417137 NUDT18Q6ZVK8 323 aa23.99■■□□□ 1.43
SMARCB1-205ENST00000417137 CCDC105Q8IYK2 499 aa23.99■■□□□ 1.43
SMARCB1-205ENST00000417137 SYNPOQ8N3V7 929 aa23.99■■□□□ 1.43
SMARCB1-205ENST00000417137 CCDC26Q8TAB7 109 aa23.99■■□□□ 1.43
SMARCB1-205ENST00000417137 CLDN23Q96B33 292 aa23.99■■□□□ 1.43
SMARCB1-205ENST00000417137 PGAP3Q96FM1 320 aaPredicted RBP23.99■■□□□ 1.43
SMARCB1-205ENST00000417137 PARVAQ9NVD7 372 aa23.99■■□□□ 1.43
SMARCB1-205ENST00000417137 ARHGAP20Q9P2F6 1191 aa23.99■■□□□ 1.43
SMARCB1-205ENST00000417137 DCNP07585 359 aaKnown RBP23.98■■□□□ 1.43
SMARCB1-205ENST00000417137 PLEKP08567 350 aaPredicted RBP23.98■■□□□ 1.43
SMARCB1-205ENST00000417137 MYBL1P10243 752 aa23.98■■□□□ 1.43
SMARCB1-205ENST00000417137 TYRP14679 529 aa23.98■■□□□ 1.43
SMARCB1-205ENST00000417137 DESP17661 470 aa23.98■■□□□ 1.43
SMARCB1-205ENST00000417137 SDC4P31431 198 aa23.98■■□□□ 1.43
SMARCB1-205ENST00000417137 OPRD1P41143 372 aa23.98■■□□□ 1.43
SMARCB1-205ENST00000417137 DEUP1Q05D60 604 aa23.98■■□□□ 1.43
SMARCB1-205ENST00000417137 PPP2R5DQ14738 602 aa23.98■■□□□ 1.43
SMARCB1-205ENST00000417137 MPPE1Q53F39 396 aa23.98■■□□□ 1.43
SMARCB1-205ENST00000417137 ZNF687Q8N1G0 1237 aa23.98■■□□□ 1.43
SMARCB1-205ENST00000417137 TMEM105Q8N8V8 129 aa23.98■■□□□ 1.43
SMARCB1-205ENST00000417137 DDI1Q8WTU0 396 aa23.98■■□□□ 1.43
SMARCB1-205ENST00000417137 RXFP2Q8WXD0 754 aa23.98■■□□□ 1.43
SMARCB1-205ENST00000417137 CHFRQ96EP1 664 aa23.98■■□□□ 1.43
SMARCB1-205ENST00000417137 TMA16Q96EY4 203 aaKnown RBP23.98■■□□□ 1.43
SMARCB1-205ENST00000417137 PNKPQ96T60 521 aa23.98■■□□□ 1.43
SMARCB1-205ENST00000417137 ISCUQ9H1K1 167 aa23.98■■□□□ 1.43
SMARCB1-205ENST00000417137 DEF6Q9H4E7 631 aa23.98■■□□□ 1.43
SMARCB1-205ENST00000417137 WDCPQ9H6R7 721 aa23.98■■□□□ 1.43
SMARCB1-205ENST00000417137 DEC1Q9P2X7 70 aa23.98■■□□□ 1.43
SMARCB1-205ENST00000417137 COL4A2P08572 1712 aa23.98■■□□□ 1.43
SMARCB1-205ENST00000417137 SSU72P8A0A1W2PR75 194 aa23.97■■□□□ 1.43
SMARCB1-205ENST00000417137 MOCS2O96007 188 aaPredicted RBP23.97■■□□□ 1.43
SMARCB1-205ENST00000417137 CHRNB1P11230 501 aa23.97■■□□□ 1.43
SMARCB1-205ENST00000417137 RRM1P23921 792 aa23.97■■□□□ 1.43
SMARCB1-205ENST00000417137 VCPP55072 806 aaKnown RBP23.97■■□□□ 1.43
SMARCB1-205ENST00000417137 GAB4Q2WGN9 574 aa23.97■■□□□ 1.43
SMARCB1-205ENST00000417137 FBXO43Q4G163 708 aa23.97■■□□□ 1.43
SMARCB1-205ENST00000417137 BRMS1LQ5PSV4 323 aa23.97■■□□□ 1.43
SMARCB1-205ENST00000417137 DCUN1D2Q6PH85 259 aa23.97■■□□□ 1.43
SMARCB1-205ENST00000417137 WDR59Q6PJI9 974 aa23.97■■□□□ 1.43
SMARCB1-205ENST00000417137 ALYREFQ86V81 257 aaKnown RBP23.97■■□□□ 1.43
SMARCB1-205ENST00000417137 EMC1Q8N766 993 aa23.97■■□□□ 1.43
SMARCB1-205ENST00000417137 NAT16Q8N8M0 369 aa23.97■■□□□ 1.43
SMARCB1-205ENST00000417137 CFAP57Q96MR6 1250 aa23.97■■□□□ 1.43
SMARCB1-205ENST00000417137 TBCBQ99426 244 aa23.97■■□□□ 1.43
SMARCB1-205ENST00000417137 C2CD4BA6NLJ0 364 aa23.96■■□□□ 1.43
SMARCB1-205ENST00000417137 KCNU1A8MYU2 1149 aa23.96■■□□□ 1.43
SMARCB1-205ENST00000417137 CACNG3O60359 315 aa23.96■■□□□ 1.43
SMARCB1-205ENST00000417137 PENKP01210 267 aaPredicted RBP23.96■■□□□ 1.43
SMARCB1-205ENST00000417137 APODP05090 189 aa23.96■■□□□ 1.43
SMARCB1-205ENST00000417137 RFC1P35251 1148 aaPredicted RBP23.96■■□□□ 1.43
SMARCB1-205ENST00000417137 EIF4A3P38919 411 aaKnown RBP23.96■■□□□ 1.43
SMARCB1-205ENST00000417137 PTPN9P43378 593 aa23.96■■□□□ 1.43
SMARCB1-205ENST00000417137 SLC6A11P48066 632 aa23.96■■□□□ 1.43
SMARCB1-205ENST00000417137 CXCR3P49682 368 aa23.96■■□□□ 1.43
SMARCB1-205ENST00000417137 FZD5Q13467 585 aa23.96■■□□□ 1.43
SMARCB1-205ENST00000417137 FSTL4Q6MZW2 842 aa23.96■■□□□ 1.43
SMARCB1-205ENST00000417137 ALKBH5Q6P6C2 394 aaKnown RBP23.96■■□□□ 1.43
SMARCB1-205ENST00000417137 ETFBKMTQ8IXQ9 262 aa23.96■■□□□ 1.43
SMARCB1-205ENST00000417137 JOSD2Q8TAC2 188 aa23.96■■□□□ 1.43
SMARCB1-205ENST00000417137 IER2Q9BTL4 223 aa23.96■■□□□ 1.43
SMARCB1-205ENST00000417137 A0A087X0T9 212 aa23.95■■□□□ 1.42
SMARCB1-205ENST00000417137 TCRBV5S1A1TA0A578 114 aa23.95■■□□□ 1.42
SMARCB1-205ENST00000417137 TYW5A2RUC4 315 aaKnown RBP23.95■■□□□ 1.42
SMARCB1-205ENST00000417137 TSPAN3O60637 253 aa23.95■■□□□ 1.42
SMARCB1-205ENST00000417137 TULP3O75386 442 aa23.95■■□□□ 1.42
SMARCB1-205ENST00000417137 FAM228BP0C875 321 aa23.95■■□□□ 1.42
SMARCB1-205ENST00000417137 GPD1P21695 349 aa23.95■■□□□ 1.42
SMARCB1-205ENST00000417137 RDXP35241 583 aaKnown RBP23.95■■□□□ 1.42
SMARCB1-205ENST00000417137 GRIA2P42262 883 aa23.95■■□□□ 1.42
SMARCB1-205ENST00000417137 MAPK8IP2Q13387 824 aaPredicted RBP23.95■■□□□ 1.42
SMARCB1-205ENST00000417137 CCINQ13939 588 aa23.95■■□□□ 1.42
SMARCB1-205ENST00000417137 CCDC122Q5T0U0 273 aa23.95■■□□□ 1.42
SMARCB1-205ENST00000417137 MPP7Q5T2T1 576 aa23.95■■□□□ 1.42
SMARCB1-205ENST00000417137 ACBD5Q5T8D3 534 aaPredicted RBP23.95■■□□□ 1.42
SMARCB1-205ENST00000417137 FYB2Q5VWT5 728 aa23.95■■□□□ 1.42
SMARCB1-205ENST00000417137 PLEKHA7Q6IQ23 1121 aa23.95■■□□□ 1.42
SMARCB1-205ENST00000417137 BHMTQ93088 406 aa23.95■■□□□ 1.42
SMARCB1-205ENST00000417137 CCDC42Q96M95 316 aa23.95■■□□□ 1.42
SMARCB1-205ENST00000417137 PRRX2Q99811 253 aa23.95■■□□□ 1.42
SMARCB1-205ENST00000417137 FBRSL1Q9HCM7 1045 aaKnown RBP23.95■■□□□ 1.42
SMARCB1-205ENST00000417137 MRPL47Q9HD33 250 aaKnown RBP23.95■■□□□ 1.42
SMARCB1-205ENST00000417137 ARHGEF4Q9NR80 690 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms