RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 NCAM1P13591 858 aa15.08■□□□□ 0
PAF1-202ENST00000416728 CD59P13987 128 aa15.08■□□□□ 0
PAF1-202ENST00000416728 TBXAS1P24557 533 aaPredicted RBP15.08■□□□□ 0
PAF1-202ENST00000416728 MAOBP27338 520 aa15.08■□□□□ 0
PAF1-202ENST00000416728 OXTRP30559 389 aa15.08■□□□□ 0
PAF1-202ENST00000416728 TPMTP51580 245 aa15.08■□□□□ 0
PAF1-202ENST00000416728 ZNF445P59923 1031 aa15.08■□□□□ 0
PAF1-202ENST00000416728 LRRC63Q05C16 580 aa15.08■□□□□ 0
PAF1-202ENST00000416728 LRMPQ12912 555 aa15.08■□□□□ 0
PAF1-202ENST00000416728 HNRNPDQ14103 355 aaKnown RBP15.08■□□□□ 0
PAF1-202ENST00000416728 BSPRYQ5W0U4 402 aa15.08■□□□□ 0
PAF1-202ENST00000416728 ANKRD40Q6AI12 368 aa15.08■□□□□ 0
PAF1-202ENST00000416728 ZC3H3Q8IXZ2 948 aaKnown RBP15.08■□□□□ 0
PAF1-202ENST00000416728 KDF1Q8NAX2 398 aaPredicted RBP15.08■□□□□ 0
PAF1-202ENST00000416728 CADM4Q8NFZ8 388 aa15.08■□□□□ 0
PAF1-202ENST00000416728 UBA3Q8TBC4 463 aa15.08■□□□□ 0
PAF1-202ENST00000416728 SORCS1Q8WY21 1168 aa15.08■□□□□ 0
PAF1-202ENST00000416728 EDEM1Q92611 657 aa15.08■□□□□ 0
PAF1-202ENST00000416728 GATA6Q92908 595 aa15.08■□□□□ 0
PAF1-202ENST00000416728 KIAA1257Q9ULG3 409 aa15.08■□□□□ 0
PAF1-202ENST00000416728 NFE2L3Q9Y4A8 694 aa15.08■□□□□ 0
PAF1-202ENST00000416728 A0A1B0GTW7 788 aa15.07■□□□□ 0
PAF1-202ENST00000416728 YJEFN3A6XGL0 299 aa15.07■□□□□ 0
PAF1-202ENST00000416728 KCNJ18B7U540 433 aa15.07■□□□□ 0
PAF1-202ENST00000416728 E7ENQ6 273 aa15.07■□□□□ 0
PAF1-202ENST00000416728 H0Y626 953 aa15.07■□□□□ 0
PAF1-202ENST00000416728 O00370 1275 aa15.07■□□□□ 0
PAF1-202ENST00000416728 TSPAN3O60637 253 aa15.07■□□□□ 0
PAF1-202ENST00000416728 TRIM16O95361 564 aa15.07■□□□□ 0
PAF1-202ENST00000416728 EPHX1P07099 455 aa15.07■□□□□ 0
PAF1-202ENST00000416728 VDRP11473 427 aa15.07■□□□□ 0
PAF1-202ENST00000416728 PRKCHP24723 683 aa15.07■□□□□ 0
PAF1-202ENST00000416728 HOXD9P28356 352 aaPredicted RBP15.07■□□□□ 0
PAF1-202ENST00000416728 PMS1P54277 932 aaKnown RBP15.07■□□□□ 0
PAF1-202ENST00000416728 SLC14A1Q13336 389 aa15.07■□□□□ 0
PAF1-202ENST00000416728 TMEM215Q68D42 235 aa15.07■□□□□ 0
PAF1-202ENST00000416728 CACUL1Q86Y37 369 aa15.07■□□□□ 0
PAF1-202ENST00000416728 KCTD13Q8WZ19 329 aa15.07■□□□□ 0
PAF1-202ENST00000416728 DNASE2BQ8WZ79 361 aa15.07■□□□□ 0
PAF1-202ENST00000416728 SMARCE1Q969G3 411 aa15.07■□□□□ 0
PAF1-202ENST00000416728 SLC35C1Q96A29 364 aa15.07■□□□□ 0
PAF1-202ENST00000416728 GTPBP4Q9BZE4 634 aaKnown RBP15.07■□□□□ 0
PAF1-202ENST00000416728 ZDHHC5Q9C0B5 715 aa15.07■□□□□ 0
PAF1-202ENST00000416728 MIR1-1HGQ9H1L0 117 aa15.07■□□□□ 0
PAF1-202ENST00000416728 CNGB3Q9NQW8 809 aa15.07■□□□□ 0
PAF1-202ENST00000416728 ABCC13Q9NSE7 274 aa15.07■□□□□ 0
PAF1-202ENST00000416728 SFMBT1Q9UHJ3 866 aa15.07■□□□□ 0
PAF1-202ENST00000416728 NEUROG3Q9Y4Z2 214 aa15.07■□□□□ 0
PAF1-202ENST00000416728 TRIM49BA6NDI0 452 aa15.06■□□□□ 0
PAF1-202ENST00000416728 LATS1O95835 1130 aa15.06■□□□□ 0
PAF1-202ENST00000416728 COPAP53621 1224 aa15.06■□□□□ 0
PAF1-202ENST00000416728 FAM193AP78312 1265 aa15.06■□□□□ 0
PAF1-202ENST00000416728 GRIK2Q13002 908 aa15.06■□□□□ 0
PAF1-202ENST00000416728 ADGRF1Q5T601 910 aa15.06■□□□□ 0
PAF1-202ENST00000416728 ZCCHC9Q8N567 271 aaKnown RBP15.06■□□□□ 0
PAF1-202ENST00000416728 RBBP8NLQ8NC74 664 aaPredicted RBP15.06■□□□□ 0
PAF1-202ENST00000416728 WFIKKN2Q8TEU8 576 aa15.06■□□□□ 0
PAF1-202ENST00000416728 TMA16Q96EY4 203 aaKnown RBP15.06■□□□□ 0
PAF1-202ENST00000416728 NUP58Q9BVL2 599 aa15.06■□□□□ 0
PAF1-202ENST00000416728 METTL14Q9HCE5 456 aaKnown RBP15.06■□□□□ 0
PAF1-202ENST00000416728 HOOK1Q9UJC3 728 aaKnown RBP15.06■□□□□ 0
PAF1-202ENST00000416728 STOML2Q9UJZ1 356 aa15.06■□□□□ 0
PAF1-202ENST00000416728 PLA2G4CQ9UP65 541 aa15.06■□□□□ 0
PAF1-202ENST00000416728 MSRB2Q9Y3D2 182 aa15.06■□□□□ 0
PAF1-202ENST00000416728 PCDH15Q96QU1 1955 aa15.06■□□□□ 0
PAF1-202ENST00000416728 PI4KAP42356 2102 aa15.06■□□□□ 0
PAF1-202ENST00000416728 CACNA1EQ15878 2313 aa15.05■□□□□ 0
PAF1-202ENST00000416728 METTL12A8MUP2 240 aa15.05■□□□□ -0
PAF1-202ENST00000416728 PSMA7O14818 248 aa15.05■□□□□ -0
PAF1-202ENST00000416728 MSI1O43347 362 aaKnown RBP15.05■□□□□ -0
PAF1-202ENST00000416728 SH3BP5O60239 455 aa15.05■□□□□ -0
PAF1-202ENST00000416728 GJB3O75712 270 aa15.05■□□□□ -0
PAF1-202ENST00000416728 IGLV3-19P01714 112 aa15.05■□□□□ -0
PAF1-202ENST00000416728 PAEPP09466 180 aa15.05■□□□□ -0
PAF1-202ENST00000416728 HLA-EP13747 358 aa15.05■□□□□ -0
PAF1-202ENST00000416728 LCP1P13796 627 aa15.05■□□□□ -0
PAF1-202ENST00000416728 HLA-FP30511 346 aa15.05■□□□□ -0
PAF1-202ENST00000416728 FMO5P49326 533 aa15.05■□□□□ -0
PAF1-202ENST00000416728 DAOAP59103 153 aa15.05■□□□□ -0
PAF1-202ENST00000416728 STIM1Q13586 685 aa15.05■□□□□ -0
PAF1-202ENST00000416728 ZNF423Q2M1K9 1284 aa15.05■□□□□ -0
PAF1-202ENST00000416728 PKDCCQ504Y2 493 aa15.05■□□□□ -0
PAF1-202ENST00000416728 FNDC3BQ53EP0 1204 aaKnown RBP15.05■□□□□ -0
PAF1-202ENST00000416728 DCAF12L1Q5VU92 463 aa15.05■□□□□ -0
PAF1-202ENST00000416728 TMEM270Q6UE05 265 aa15.05■□□□□ -0
PAF1-202ENST00000416728 LCLAT1Q6UWP7 414 aa15.05■□□□□ -0
PAF1-202ENST00000416728 SCML4Q8N228 414 aa15.05■□□□□ -0
PAF1-202ENST00000416728 UBR7Q8N806 425 aa15.05■□□□□ -0
PAF1-202ENST00000416728 SPATA20Q8TB22 786 aa15.05■□□□□ -0
PAF1-202ENST00000416728 ERCC4Q92889 916 aaPredicted RBP15.05■□□□□ -0
PAF1-202ENST00000416728 CAMK1GQ96NX5 476 aa15.05■□□□□ -0
PAF1-202ENST00000416728 NT5C1BQ96P26 610 aa15.05■□□□□ -0
PAF1-202ENST00000416728 ABCB8Q9NUT2 735 aa15.05■□□□□ -0
PAF1-202ENST00000416728 KLK13Q9UKR3 277 aa15.05■□□□□ -0
PAF1-202ENST00000416728 PCDHB9Q9Y5E1 797 aa15.05■□□□□ -0
PAF1-202ENST00000416728 BCAT2O15382 392 aaPredicted RBP15.04■□□□□ -0
PAF1-202ENST00000416728 RGS7P49802 495 aa15.04■□□□□ -0
PAF1-202ENST00000416728 CAMK2GQ13555 558 aaPredicted RBP15.04■□□□□ -0
PAF1-202ENST00000416728 TRIP6Q15654 476 aaKnown RBP15.04■□□□□ -0
PAF1-202ENST00000416728 MSANTD2Q6P1R3 559 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms