RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 IDO1P14902 403 aa15.15■□□□□ 0.02
NCKIPSD-204ENST00000416649 XRCC1P18887 633 aaPredicted RBP15.15■□□□□ 0.02
NCKIPSD-204ENST00000416649 PRAMEP78395 509 aa15.15■□□□□ 0.02
NCKIPSD-204ENST00000416649 ZNF362Q5T0B9 420 aaPredicted RBP15.15■□□□□ 0.02
NCKIPSD-204ENST00000416649 FAM83AQ86UY5 434 aa15.15■□□□□ 0.02
NCKIPSD-204ENST00000416649 BHLHE22Q8NFJ8 381 aaPredicted RBP15.15■□□□□ 0.02
NCKIPSD-204ENST00000416649 ZSCAN18Q8TBC5 510 aaPredicted RBP15.15■□□□□ 0.02
NCKIPSD-204ENST00000416649 FAF2Q96CS3 445 aa15.15■□□□□ 0.02
NCKIPSD-204ENST00000416649 TCHPQ9BT92 498 aa15.15■□□□□ 0.02
NCKIPSD-204ENST00000416649 EPS15L1Q9UBC2 864 aa15.15■□□□□ 0.02
NCKIPSD-204ENST00000416649 ARHGEF37A1IGU5 675 aa15.14■□□□□ 0.01
NCKIPSD-204ENST00000416649 K7EPI3 171 aa15.14■□□□□ 0.01
NCKIPSD-204ENST00000416649 BIRC5O15392 142 aa15.14■□□□□ 0.01
NCKIPSD-204ENST00000416649 DDNO94850 711 aaPredicted RBP15.14■□□□□ 0.01
NCKIPSD-204ENST00000416649 PHKA2P46019 1235 aa15.14■□□□□ 0.01
NCKIPSD-204ENST00000416649 IDH3AP50213 366 aa15.14■□□□□ 0.01
NCKIPSD-204ENST00000416649 NDST2P52849 883 aa15.14■□□□□ 0.01
NCKIPSD-204ENST00000416649 THOP1P52888 689 aa15.14■□□□□ 0.01
NCKIPSD-204ENST00000416649 EIF3EP60228 445 aaKnown RBP15.14■□□□□ 0.01
NCKIPSD-204ENST00000416649 PFKPQ01813 784 aa15.14■□□□□ 0.01
NCKIPSD-204ENST00000416649 CD300CQ08708 224 aa15.14■□□□□ 0.01
NCKIPSD-204ENST00000416649 DCAF6Q58WW2 860 aa15.14■□□□□ 0.01
NCKIPSD-204ENST00000416649 WDR44Q5JSH3 913 aa15.14■□□□□ 0.01
NCKIPSD-204ENST00000416649 CTDP1Q9Y5B0 961 aaPredicted RBP15.14■□□□□ 0.01
NCKIPSD-204ENST00000416649 ZHX2Q9Y6X8 837 aa15.14■□□□□ 0.01
NCKIPSD-204ENST00000416649 ZNF536O15090 1300 aa15.14■□□□□ 0.01
NCKIPSD-204ENST00000416649 ZNF646O15015 1829 aaPredicted RBP15.14■□□□□ 0.01
NCKIPSD-204ENST00000416649 ZBTB11O95625 1053 aaPredicted RBP15.14■□□□□ 0.01
NCKIPSD-204ENST00000416649 ENO3P13929 434 aaPredicted RBP15.14■□□□□ 0.01
NCKIPSD-204ENST00000416649 ZNF23P17027 643 aa15.14■□□□□ 0.01
NCKIPSD-204ENST00000416649 PTGER2P43116 358 aa15.14■□□□□ 0.01
NCKIPSD-204ENST00000416649 HMGCS2P54868 508 aa15.14■□□□□ 0.01
NCKIPSD-204ENST00000416649 OGDHQ02218 1023 aa15.14■□□□□ 0.01
NCKIPSD-204ENST00000416649 ITGA7Q13683 1181 aa15.14■□□□□ 0.01
NCKIPSD-204ENST00000416649 PPP2R5DQ14738 602 aa15.14■□□□□ 0.01
NCKIPSD-204ENST00000416649 ADRM1Q16186 407 aa15.14■□□□□ 0.01
NCKIPSD-204ENST00000416649 C6orf183Q5T699 404 aa15.14■□□□□ 0.01
NCKIPSD-204ENST00000416649 FAM102BQ5T8I3 360 aa15.14■□□□□ 0.01
NCKIPSD-204ENST00000416649 PLEKHA7Q6IQ23 1121 aa15.14■□□□□ 0.01
NCKIPSD-204ENST00000416649 DNAJC24Q6P3W2 148 aa15.14■□□□□ 0.01
NCKIPSD-204ENST00000416649 RFX6Q8HWS3 928 aa15.14■□□□□ 0.01
NCKIPSD-204ENST00000416649 DDHD1Q8NEL9 900 aa15.14■□□□□ 0.01
NCKIPSD-204ENST00000416649 KRT38O76015 456 aa15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 FUCA1P04066 466 aa15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 PTPN1P18031 435 aaKnown RBP15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 TNNI1P19237 187 aa15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 EIF2AK2P19525 551 aaKnown RBP15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 KPNA1P52294 538 aaPredicted RBP15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 C21orf59P57076 290 aa15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 ZNF252P-AS1Q0IIN9 211 aa15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 DPYSL3Q14195 570 aa15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 MYO1HQ8N1T3 1032 aa15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 IL31RAQ8NI17 732 aa15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 CASP10Q92851 521 aa15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 HEPHQ9BQS7 1158 aa15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 GPATCH1Q9BRR8 931 aaKnown RBP15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 FAM213AQ9BRX8 229 aa15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 TMEM79Q9BSE2 394 aa15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 COL20A1Q9P218 1284 aa15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 PCSK1NQ9UHG2 260 aa15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 PGAP2Q9UHJ9 254 aa15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 GREB1LQ9C091 1923 aaPredicted RBP15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 CNTNAP2Q9UHC6 1331 aa15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 DNAH12Q6ZR08 3092 aa15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 GOLGA8QA0A0J9YX86 632 aa15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 GOLGA8OA6NCC3 632 aa15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 GOLGA8NF8WBI6 632 aa15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 J3QRK9 145 aa15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 MAP3K6O95382 1288 aa15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 CSH1P0DML2 217 aa15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 CSH2P0DML3 217 aa15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 MYCLP12524 364 aaPredicted RBP15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 EPHA3P29320 983 aa15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 CEP55Q53EZ4 464 aa15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 ZNF394Q53GI3 561 aa15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 CYP4A22Q5TCH4 519 aa15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 DARS2Q6PI48 645 aaKnown RBP15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 MAVSQ7Z434 540 aa15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 FAM156AQ8NDB6 213 aa15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 CATSPER1Q8NEC5 780 aa15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 LRRN4Q8WUT4 740 aa15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 FBXL8Q96CD0 374 aa15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 CALN1Q9BXU9 219 aa15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 SMYD2Q9NRG4 433 aa15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 RAB6BQ9NRW1 208 aa15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 GIPC1O14908 333 aa15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 P4HA1P13674 534 aa15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 BCAP31P51572 246 aa15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 PPM1LQ5SGD2 360 aa15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 TEDDM1Q5T9Z0 273 aa15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 PLA2G4FQ68DD2 849 aa15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 SCARA3Q6AZY7 606 aa15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 PGBD4Q96DM1 585 aa15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 ZBED3Q96IU2 234 aaPredicted RBP15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 NLRP4Q96MN2 994 aa15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 LENG8Q96PV6 779 aaPredicted RBP15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 HNRNPABQ99729 332 aaKnown RBP15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 GCOM2Q9BZD3 368 aaPredicted RBP15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 RPAP3Q9H6T3 665 aaPredicted RBP15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 SLC38A7Q9NVC3 462 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms