RNA–Protein interactions for RNA: ENST00000416585.1

SNX30-202, Transcript of sorting nexin family member 30, humanhuman

TSL 3

Gene SNX30, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30-202ENST00000416585 ITM2CQ9NQX7 267 aa11.87□□□□□ -0.51
SNX30-202ENST00000416585 ELOVL2Q9NXB9 296 aa11.87□□□□□ -0.51
SNX30-202ENST00000416585 WSB2Q9NYS7 404 aaPredicted RBP11.87□□□□□ -0.51
SNX30-202ENST00000416585 USP36Q9P275 1121 aaKnown RBP11.87□□□□□ -0.51
SNX30-202ENST00000416585 TSPAN16Q9UKR8 245 aa11.87□□□□□ -0.51
SNX30-202ENST00000416585 PLA2G4CQ9UP65 541 aa11.87□□□□□ -0.51
SNX30-202ENST00000416585 APOBEC2Q9Y235 224 aaKnown RBP11.87□□□□□ -0.51
SNX30-202ENST00000416585 MSRB2Q9Y3D2 182 aa11.87□□□□□ -0.51
SNX30-202ENST00000416585 HBS1LQ9Y450 684 aaKnown RBP11.87□□□□□ -0.51
SNX30-202ENST00000416585 PLXNB3Q9ULL4 1909 aa11.87□□□□□ -0.51
SNX30-202ENST00000416585 SLC16A3O15427 465 aaKnown RBP11.86□□□□□ -0.51
SNX30-202ENST00000416585 SMC2O95347 1197 aa11.86□□□□□ -0.51
SNX30-202ENST00000416585 SETSIPP0DME0 302 aa11.86□□□□□ -0.51
SNX30-202ENST00000416585 VDRP11473 427 aa11.86□□□□□ -0.51
SNX30-202ENST00000416585 MATKP42679 507 aa11.86□□□□□ -0.51
SNX30-202ENST00000416585 TPMTP51580 245 aa11.86□□□□□ -0.51
SNX30-202ENST00000416585 PDE4CQ08493 712 aa11.86□□□□□ -0.51
SNX30-202ENST00000416585 CETN1Q12798 172 aa11.86□□□□□ -0.51
SNX30-202ENST00000416585 GRIK2Q13002 908 aa11.86□□□□□ -0.51
SNX30-202ENST00000416585 CUL2Q13617 745 aa11.86□□□□□ -0.51
SNX30-202ENST00000416585 TRIP6Q15654 476 aaKnown RBP11.86□□□□□ -0.51
SNX30-202ENST00000416585 ZCWPW2Q504Y3 356 aa11.86□□□□□ -0.51
SNX30-202ENST00000416585 FAM124AQ86V42 546 aa11.86□□□□□ -0.51
SNX30-202ENST00000416585 CCDC117Q8IWD4 279 aaPredicted RBP11.86□□□□□ -0.51
SNX30-202ENST00000416585 SMYD4Q8IYR2 804 aaPredicted RBP11.86□□□□□ -0.51
SNX30-202ENST00000416585 ZNF557Q8N988 423 aaPredicted RBP11.86□□□□□ -0.51
SNX30-202ENST00000416585 SETD7Q8WTS6 366 aaKnown RBP11.86□□□□□ -0.51
SNX30-202ENST00000416585 GATA6Q92908 595 aa11.86□□□□□ -0.51
SNX30-202ENST00000416585 TATDN2Q93075 761 aa11.86□□□□□ -0.51
SNX30-202ENST00000416585 PIWIL1Q96J94 861 aaKnown RBP11.86□□□□□ -0.51
SNX30-202ENST00000416585 GTPBP4Q9BZE4 634 aaKnown RBP11.86□□□□□ -0.51
SNX30-202ENST00000416585 CD248Q9HCU0 757 aa11.86□□□□□ -0.51
SNX30-202ENST00000416585 ABCC13Q9NSE7 274 aa11.86□□□□□ -0.51
SNX30-202ENST00000416585 KLK13Q9UKR3 277 aa11.86□□□□□ -0.51
SNX30-202ENST00000416585 WASF3Q9UPY6 502 aa11.86□□□□□ -0.51
SNX30-202ENST00000416585 NFE2L3Q9Y4A8 694 aa11.86□□□□□ -0.51
SNX30-202ENST00000416585 USP24Q9UPU5 2620 aa11.86□□□□□ -0.51
SNX30-202ENST00000416585 ADAMTS20P59510 1910 aa11.86□□□□□ -0.51
SNX30-202ENST00000416585 BCAT2O15382 392 aaPredicted RBP11.85□□□□□ -0.51
SNX30-202ENST00000416585 SH3BP5O60239 455 aa11.85□□□□□ -0.51
SNX30-202ENST00000416585 TSPAN3O60637 253 aa11.85□□□□□ -0.51
SNX30-202ENST00000416585 LATS1O95835 1130 aa11.85□□□□□ -0.51
SNX30-202ENST00000416585 DNTTP04053 509 aa11.85□□□□□ -0.51
SNX30-202ENST00000416585 ATP5BP06576 529 aaKnown RBP11.85□□□□□ -0.51
SNX30-202ENST00000416585 LCP1P13796 627 aa11.85□□□□□ -0.51
SNX30-202ENST00000416585 CD59P13987 128 aa11.85□□□□□ -0.51
SNX30-202ENST00000416585 PRKCHP24723 683 aa11.85□□□□□ -0.51
SNX30-202ENST00000416585 FKBP3Q00688 224 aaKnown RBP11.85□□□□□ -0.51
SNX30-202ENST00000416585 PNOCQ13519 176 aa11.85□□□□□ -0.51
SNX30-202ENST00000416585 TEAD4Q15561 434 aa11.85□□□□□ -0.51
SNX30-202ENST00000416585 TRIP4Q15650 581 aaPredicted RBP11.85□□□□□ -0.51
SNX30-202ENST00000416585 TTC31Q49AM3 519 aaPredicted RBP11.85□□□□□ -0.51
SNX30-202ENST00000416585 ZNF658Q5TYW1 1059 aaPredicted RBP11.85□□□□□ -0.51
SNX30-202ENST00000416585 PM20D1Q6GTS8 502 aa11.85□□□□□ -0.51
SNX30-202ENST00000416585 CHST9Q7L1S5 443 aa11.85□□□□□ -0.51
SNX30-202ENST00000416585 AHI1Q8N157 1196 aa11.85□□□□□ -0.51
SNX30-202ENST00000416585 ENGASEQ8NFI3 743 aa11.85□□□□□ -0.51
SNX30-202ENST00000416585 OR2T3Q8NH03 318 aa11.85□□□□□ -0.51
SNX30-202ENST00000416585 EDEM1Q92611 657 aa11.85□□□□□ -0.51
SNX30-202ENST00000416585 SMARCE1Q969G3 411 aa11.85□□□□□ -0.51
SNX30-202ENST00000416585 TMA16Q96EY4 203 aaKnown RBP11.85□□□□□ -0.51
SNX30-202ENST00000416585 MKRN2Q9H000 416 aaKnown RBP11.85□□□□□ -0.51
SNX30-202ENST00000416585 PCED1AQ9H1Q7 454 aa11.85□□□□□ -0.51
SNX30-202ENST00000416585 LHX5Q9H2C1 402 aa11.85□□□□□ -0.51
SNX30-202ENST00000416585 GOLPH3LQ9H4A5 285 aa11.85□□□□□ -0.51
SNX30-202ENST00000416585 FBRSQ9HAH7 460 aa11.85□□□□□ -0.51
SNX30-202ENST00000416585 CNGB3Q9NQW8 809 aa11.85□□□□□ -0.51
SNX30-202ENST00000416585 ARMCX3Q9UH62 379 aaPredicted RBP11.85□□□□□ -0.51
SNX30-202ENST00000416585 SFMBT1Q9UHJ3 866 aa11.85□□□□□ -0.51
SNX30-202ENST00000416585 KIAA1257Q9ULG3 409 aa11.85□□□□□ -0.51
SNX30-202ENST00000416585 METTL12A8MUP2 240 aa11.84□□□□□ -0.51
SNX30-202ENST00000416585 PSMA7O14818 248 aa11.84□□□□□ -0.51
SNX30-202ENST00000416585 FTH1P19P0C7X4 201 aa11.84□□□□□ -0.51
SNX30-202ENST00000416585 POLR2EP19388 210 aaKnown RBP11.84□□□□□ -0.51
SNX30-202ENST00000416585 PRCPP42785 496 aa11.84□□□□□ -0.51
SNX30-202ENST00000416585 SLC11A2P49281 568 aa11.84□□□□□ -0.51
SNX30-202ENST00000416585 ST8SIA6P61647 398 aa11.84□□□□□ -0.51
SNX30-202ENST00000416585 LRRC63Q05C16 580 aa11.84□□□□□ -0.51
SNX30-202ENST00000416585 SFSWAPQ12872 951 aaKnown RBP11.84□□□□□ -0.51
SNX30-202ENST00000416585 LRMPQ12912 555 aa11.84□□□□□ -0.51
SNX30-202ENST00000416585 ENPP2Q13822 863 aa11.84□□□□□ -0.51
SNX30-202ENST00000416585 STILQ15468 1287 aa11.84□□□□□ -0.51
SNX30-202ENST00000416585 CCDC40Q4G0X9 1142 aa11.84□□□□□ -0.51
SNX30-202ENST00000416585 CBWD6Q4V339 395 aa11.84□□□□□ -0.51
SNX30-202ENST00000416585 CBWD3Q5JTY5 395 aa11.84□□□□□ -0.51
SNX30-202ENST00000416585 CBWD5Q5RIA9 395 aa11.84□□□□□ -0.51
SNX30-202ENST00000416585 ADGRF1Q5T601 910 aa11.84□□□□□ -0.51
SNX30-202ENST00000416585 BSPRYQ5W0U4 402 aa11.84□□□□□ -0.51
SNX30-202ENST00000416585 NUGGCQ68CJ6 796 aa11.84□□□□□ -0.51
SNX30-202ENST00000416585 ADAT2Q7Z6V5 191 aaKnown RBP11.84□□□□□ -0.51
SNX30-202ENST00000416585 UNC45BQ8IWX7 931 aa11.84□□□□□ -0.51
SNX30-202ENST00000416585 FAM217AQ8IXS0 508 aa11.84□□□□□ -0.51
SNX30-202ENST00000416585 CHCHD4Q8N4Q1 142 aa11.84□□□□□ -0.51
SNX30-202ENST00000416585 UBA3Q8TBC4 463 aa11.84□□□□□ -0.51
SNX30-202ENST00000416585 SORCS1Q8WY21 1168 aa11.84□□□□□ -0.51
SNX30-202ENST00000416585 DNASE2BQ8WZ79 361 aa11.84□□□□□ -0.51
SNX30-202ENST00000416585 CAMK1GQ96NX5 476 aa11.84□□□□□ -0.51
SNX30-202ENST00000416585 NT5C1BQ96P26 610 aa11.84□□□□□ -0.51
SNX30-202ENST00000416585 GSDMAQ96QA5 445 aa11.84□□□□□ -0.51
SNX30-202ENST00000416585 DDX50Q9BQ39 737 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms