RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 ZNF512Q96ME7 567 aaPredicted RBP13.23□□□□□ -0.29
SCN1B-202ENST00000415950 ZDHHC15Q96MV8 337 aa13.23□□□□□ -0.29
SCN1B-202ENST00000415950 AP4S1Q9Y587 144 aa13.23□□□□□ -0.29
SCN1B-202ENST00000415950 MYO5BQ9ULV0 1848 aa13.22□□□□□ -0.29
SCN1B-202ENST00000415950 TCRBV9S1A1TA0A576 114 aa13.22□□□□□ -0.29
SCN1B-202ENST00000415950 SMAPO00193 183 aa13.22□□□□□ -0.29
SCN1B-202ENST00000415950 BAIAP3O94812 1187 aa13.22□□□□□ -0.29
SCN1B-202ENST00000415950 BLMHQ13867 455 aa13.22□□□□□ -0.29
SCN1B-202ENST00000415950 UGCGQ16739 394 aa13.22□□□□□ -0.29
SCN1B-202ENST00000415950 UBAP2Q5T6F2 1119 aaKnown RBP13.22□□□□□ -0.29
SCN1B-202ENST00000415950 KCNT2Q6UVM3 1135 aa13.22□□□□□ -0.29
SCN1B-202ENST00000415950 CLVS1Q8IUQ0 354 aaPredicted RBP13.22□□□□□ -0.29
SCN1B-202ENST00000415950 C4orf19Q8IY42 314 aa13.22□□□□□ -0.29
SCN1B-202ENST00000415950 TDRD5Q8NAT2 981 aaKnown RBP13.22□□□□□ -0.29
SCN1B-202ENST00000415950 TRPC7Q9HCX4 862 aa13.22□□□□□ -0.29
SCN1B-202ENST00000415950 A1CFQ9NQ94 594 aaKnown RBP13.22□□□□□ -0.29
SCN1B-202ENST00000415950 CLASP2O75122 1294 aaKnown RBP13.22□□□□□ -0.29
SCN1B-202ENST00000415950 HSMCR30P0CW71 290 aa13.22□□□□□ -0.29
SCN1B-202ENST00000415950 SPATA6LQ8N4H0 392 aa13.22□□□□□ -0.29
SCN1B-202ENST00000415950 SNX31Q8N9S9 440 aa13.22□□□□□ -0.29
SCN1B-202ENST00000415950 ERLEC1Q96DZ1 483 aa13.22□□□□□ -0.29
SCN1B-202ENST00000415950 CELF6Q96J87 481 aaKnown RBP13.22□□□□□ -0.29
SCN1B-202ENST00000415950 CNPY3Q9BT09 278 aa13.22□□□□□ -0.29
SCN1B-202ENST00000415950 GPR63Q9BZJ6 419 aa13.22□□□□□ -0.29
SCN1B-202ENST00000415950 ZNF395Q9H8N7 513 aaPredicted RBP13.22□□□□□ -0.29
SCN1B-202ENST00000415950 THAP1Q9NVV9 213 aa13.22□□□□□ -0.29
SCN1B-202ENST00000415950 ABT1Q9ULW3 272 aaKnown RBP13.22□□□□□ -0.29
SCN1B-202ENST00000415950 C2CD2LO14523 706 aa13.22□□□□□ -0.29
SCN1B-202ENST00000415950 IL1R1P14778 569 aa13.22□□□□□ -0.29
SCN1B-202ENST00000415950 CAP2P40123 477 aa13.22□□□□□ -0.29
SCN1B-202ENST00000415950 CHRNB3Q05901 458 aa13.22□□□□□ -0.29
SCN1B-202ENST00000415950 RIPK1Q13546 671 aa13.22□□□□□ -0.29
SCN1B-202ENST00000415950 NEDD8Q15843 81 aa13.22□□□□□ -0.29
SCN1B-202ENST00000415950 PAN2Q504Q3 1202 aaKnown RBP13.22□□□□□ -0.29
SCN1B-202ENST00000415950 ANKRD22Q5VYY1 191 aa13.22□□□□□ -0.29
SCN1B-202ENST00000415950 CHSY1Q86X52 802 aa13.22□□□□□ -0.29
SCN1B-202ENST00000415950 KATNAL2Q8IYT4 538 aa13.22□□□□□ -0.29
SCN1B-202ENST00000415950 ULK2Q8IYT8 1036 aa13.22□□□□□ -0.29
SCN1B-202ENST00000415950 OR6Y1Q8NGX8 325 aa13.22□□□□□ -0.29
SCN1B-202ENST00000415950 CALML6Q8TD86 181 aa13.22□□□□□ -0.29
SCN1B-202ENST00000415950 SIX2Q9NPC8 291 aa13.22□□□□□ -0.29
SCN1B-202ENST00000415950 BCL9O00512 1426 aa13.22□□□□□ -0.29
SCN1B-202ENST00000415950 CAPN8A6NHC0 703 aa13.21□□□□□ -0.29
SCN1B-202ENST00000415950 TRPC5OSA6NMA1 111 aa13.21□□□□□ -0.29
SCN1B-202ENST00000415950 E7ENQ6 273 aa13.21□□□□□ -0.29
SCN1B-202ENST00000415950 SLC26A4O43511 780 aa13.21□□□□□ -0.29
SCN1B-202ENST00000415950 KDELR1P24390 212 aa13.21□□□□□ -0.29
SCN1B-202ENST00000415950 SOAT1P35610 550 aa13.21□□□□□ -0.29
SCN1B-202ENST00000415950 CSHL1Q14406 222 aa13.21□□□□□ -0.29
SCN1B-202ENST00000415950 POU6F1Q14863 301 aa13.21□□□□□ -0.29
SCN1B-202ENST00000415950 ANGPT1Q15389 498 aa13.21□□□□□ -0.29
SCN1B-202ENST00000415950 VWA5B1Q5TIE3 1220 aa13.21□□□□□ -0.29
SCN1B-202ENST00000415950 CHADLQ6NUI6 762 aa13.21□□□□□ -0.29
SCN1B-202ENST00000415950 C6orf89Q6UWU4 347 aa13.21□□□□□ -0.29
SCN1B-202ENST00000415950 RIC8BQ9NVN3 520 aa13.21□□□□□ -0.29
SCN1B-202ENST00000415950 NDUFA13Q9P0J0 144 aa13.21□□□□□ -0.29
SCN1B-202ENST00000415950 TPBGLP0DKB5 382 aa13.21□□□□□ -0.29
SCN1B-202ENST00000415950 ADRA2BP18089 450 aa13.21□□□□□ -0.29
SCN1B-202ENST00000415950 TSPAN8P19075 237 aa13.21□□□□□ -0.29
SCN1B-202ENST00000415950 SP100P23497 879 aaPredicted RBP13.21□□□□□ -0.29
SCN1B-202ENST00000415950 DSG3P32926 999 aa13.21□□□□□ -0.29
SCN1B-202ENST00000415950 TNFSF9P41273 254 aa13.21□□□□□ -0.29
SCN1B-202ENST00000415950 SLC16A1P53985 500 aa13.21□□□□□ -0.29
SCN1B-202ENST00000415950 MARSP56192 900 aaKnown RBP13.21□□□□□ -0.29
SCN1B-202ENST00000415950 TDRD10Q5VZ19 366 aaKnown RBP13.21□□□□□ -0.29
SCN1B-202ENST00000415950 C11orf96Q7Z7L8 435 aa13.21□□□□□ -0.29
SCN1B-202ENST00000415950 MIB1Q86YT6 1006 aa13.21□□□□□ -0.29
SCN1B-202ENST00000415950 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.21□□□□□ -0.29
SCN1B-202ENST00000415950 GLIS1Q8NBF1 620 aa13.21□□□□□ -0.29
SCN1B-202ENST00000415950 KYQ8NBH2 561 aa13.21□□□□□ -0.29
SCN1B-202ENST00000415950 JOSD2Q8TAC2 188 aa13.21□□□□□ -0.29
SCN1B-202ENST00000415950 PIWIL2Q8TC59 973 aaKnown RBP13.21□□□□□ -0.29
SCN1B-202ENST00000415950 DDI1Q8WTU0 396 aa13.21□□□□□ -0.29
SCN1B-202ENST00000415950 PHF21AQ96BD5 680 aa13.21□□□□□ -0.29
SCN1B-202ENST00000415950 ZNF570Q96NI8 536 aa13.21□□□□□ -0.29
SCN1B-202ENST00000415950 ELP3Q9H9T3 547 aa13.21□□□□□ -0.29
SCN1B-202ENST00000415950 NSMCE4AQ9NXX6 385 aa13.21□□□□□ -0.29
SCN1B-202ENST00000415950 SATB2Q9UPW6 733 aa13.21□□□□□ -0.29
SCN1B-202ENST00000415950 ERI2A8K979 691 aaKnown RBP13.21□□□□□ -0.29
SCN1B-202ENST00000415950 AP3B1O00203 1094 aa13.21□□□□□ -0.29
SCN1B-202ENST00000415950 VTNP04004 478 aa13.21□□□□□ -0.29
SCN1B-202ENST00000415950 IMPDH2P12268 514 aa13.21□□□□□ -0.29
SCN1B-202ENST00000415950 CYP2F1P24903 491 aa13.21□□□□□ -0.29
SCN1B-202ENST00000415950 NFYCQ13952 458 aa13.21□□□□□ -0.29
SCN1B-202ENST00000415950 TMEM161BQ8NDZ6 487 aa13.21□□□□□ -0.29
SCN1B-202ENST00000415950 SH3TC2Q8TF17 1288 aa13.21□□□□□ -0.29
SCN1B-202ENST00000415950 NDNQ99608 321 aa13.21□□□□□ -0.29
SCN1B-202ENST00000415950 CGRRF1Q99675 332 aa13.21□□□□□ -0.29
SCN1B-202ENST00000415950 SMARCAD1Q9H4L7 1026 aa13.21□□□□□ -0.29
SCN1B-202ENST00000415950 AVENQ9NQS1 362 aaPredicted RBP13.21□□□□□ -0.29
SCN1B-202ENST00000415950 AP4E1Q9UPM8 1137 aa13.21□□□□□ -0.29
SCN1B-202ENST00000415950 CAB39Q9Y376 341 aaPredicted RBP13.21□□□□□ -0.29
SCN1B-202ENST00000415950 A0A096LPK6 155 aa13.21□□□□□ -0.3
SCN1B-202ENST00000415950 E5RJQ4 531 aa13.21□□□□□ -0.3
SCN1B-202ENST00000415950 H0YGN5 161 aa13.21□□□□□ -0.3
SCN1B-202ENST00000415950 IRF1P10914 325 aa13.21□□□□□ -0.3
SCN1B-202ENST00000415950 SPDYCQ5MJ68 293 aa13.21□□□□□ -0.3
SCN1B-202ENST00000415950 CMC1Q7Z7K0 106 aa13.21□□□□□ -0.3
SCN1B-202ENST00000415950 KBTBD2Q8IY47 623 aa13.21□□□□□ -0.3
SCN1B-202ENST00000415950 ZNF280CQ8ND82 737 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms