RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 GDF3Q9NR23 364 aa15.1■□□□□ 0.01
SGCE-202ENST00000415788 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.1■□□□□ 0.01
SGCE-202ENST00000415788 UVRAGQ9P2Y5 699 aa15.1■□□□□ 0.01
SGCE-202ENST00000415788 DNMT3LQ9UJW3 386 aa15.1■□□□□ 0.01
SGCE-202ENST00000415788 CAPN6Q9Y6Q1 641 aa15.1■□□□□ 0.01
SGCE-202ENST00000415788 GRID2IPA4D2P6 1211 aa15.1■□□□□ 0.01
SGCE-202ENST00000415788 C2orf78A6NCI8 922 aa15.1■□□□□ 0.01
SGCE-202ENST00000415788 ATMINO43313 823 aaPredicted RBP15.1■□□□□ 0.01
SGCE-202ENST00000415788 COCHO43405 550 aa15.1■□□□□ 0.01
SGCE-202ENST00000415788 GRAP2O75791 330 aa15.1■□□□□ 0.01
SGCE-202ENST00000415788 FYNP06241 537 aa15.1■□□□□ 0.01
SGCE-202ENST00000415788 DESP17661 470 aa15.1■□□□□ 0.01
SGCE-202ENST00000415788 RNASE9P60153 205 aaKnown RBP15.1■□□□□ 0.01
SGCE-202ENST00000415788 DCAF6Q58WW2 860 aa15.1■□□□□ 0.01
SGCE-202ENST00000415788 PPP1R15BQ5SWA1 713 aa15.1■□□□□ 0.01
SGCE-202ENST00000415788 PHLDB2Q86SQ0 1253 aa15.1■□□□□ 0.01
SGCE-202ENST00000415788 CMTM8Q8IZV2 173 aa15.1■□□□□ 0.01
SGCE-202ENST00000415788 IQCKQ8N0W5 287 aa15.1■□□□□ 0.01
SGCE-202ENST00000415788 DEFB106AQ8N104 65 aa15.1■□□□□ 0.01
SGCE-202ENST00000415788 ARL8AQ96BM9 186 aa15.1■□□□□ 0.01
SGCE-202ENST00000415788 ACSF2Q96CM8 615 aaPredicted RBP15.1■□□□□ 0.01
SGCE-202ENST00000415788 PHF7Q9BWX1 381 aaPredicted RBP15.1■□□□□ 0.01
SGCE-202ENST00000415788 PACSIN1Q9BY11 444 aa15.1■□□□□ 0.01
SGCE-202ENST00000415788 CCSER2Q9H7U1 834 aa15.1■□□□□ 0.01
SGCE-202ENST00000415788 NRG2O14511 850 aaPredicted RBP15.09■□□□□ 0.01
SGCE-202ENST00000415788 MOCS3O95396 460 aa15.09■□□□□ 0.01
SGCE-202ENST00000415788 CKMP06732 381 aa15.09■□□□□ 0.01
SGCE-202ENST00000415788 GBP2P32456 591 aaPredicted RBP15.09■□□□□ 0.01
SGCE-202ENST00000415788 FNTAP49354 379 aa15.09■□□□□ 0.01
SGCE-202ENST00000415788 KPNA1P52294 538 aaPredicted RBP15.09■□□□□ 0.01
SGCE-202ENST00000415788 SLC7A9P82251 487 aa15.09■□□□□ 0.01
SGCE-202ENST00000415788 STXBP5Q5T5C0 1151 aa15.09■□□□□ 0.01
SGCE-202ENST00000415788 ARL14EPQ8N8R7 260 aaPredicted RBP15.09■□□□□ 0.01
SGCE-202ENST00000415788 EIF1ADQ8N9N8 165 aaKnown RBP15.09■□□□□ 0.01
SGCE-202ENST00000415788 FNIP1Q8TF40 1166 aa15.09■□□□□ 0.01
SGCE-202ENST00000415788 RFFLQ8WZ73 363 aa15.09■□□□□ 0.01
SGCE-202ENST00000415788 MCEEQ96PE7 176 aa15.09■□□□□ 0.01
SGCE-202ENST00000415788 DDX23Q9BUQ8 820 aaKnown RBP15.09■□□□□ 0.01
SGCE-202ENST00000415788 SMOC2Q9H3U7 446 aa15.09■□□□□ 0.01
SGCE-202ENST00000415788 NAALADL1Q9UQQ1 740 aa15.09■□□□□ 0.01
SGCE-202ENST00000415788 NR2E1Q9Y466 385 aa15.09■□□□□ 0.01
SGCE-202ENST00000415788 CAPN7Q9Y6W3 813 aa15.09■□□□□ 0.01
SGCE-202ENST00000415788 C2orf16Q68DN1 1984 aa15.08■□□□□ 0.01
SGCE-202ENST00000415788 C2CD4BA6NLJ0 364 aa15.08■□□□□ 0.01
SGCE-202ENST00000415788 HMGB1P1B2RPK0 211 aaPredicted RBP15.08■□□□□ 0.01
SGCE-202ENST00000415788 H0YHG0 523 aa15.08■□□□□ 0.01
SGCE-202ENST00000415788 MBL2P11226 248 aaPredicted RBP15.08■□□□□ 0.01
SGCE-202ENST00000415788 PDGFRAP16234 1089 aa15.08■□□□□ 0.01
SGCE-202ENST00000415788 FLT3P36888 993 aa15.08■□□□□ 0.01
SGCE-202ENST00000415788 TCEAL1Q15170 157 aa15.08■□□□□ 0.01
SGCE-202ENST00000415788 SLC25A52Q3SY17 297 aa15.08■□□□□ 0.01
SGCE-202ENST00000415788 SYPL2Q5VXT5 272 aa15.08■□□□□ 0.01
SGCE-202ENST00000415788 ZSCAN18Q8TBC5 510 aaPredicted RBP15.08■□□□□ 0.01
SGCE-202ENST00000415788 SERPINB11Q96P15 392 aa15.08■□□□□ 0.01
SGCE-202ENST00000415788 NUP85Q9BW27 656 aa15.08■□□□□ 0.01
SGCE-202ENST00000415788 RNF38Q9H0F5 515 aa15.08■□□□□ 0.01
SGCE-202ENST00000415788 KIF9Q9HAQ2 790 aa15.08■□□□□ 0.01
SGCE-202ENST00000415788 MARCH2Q9P0N8 246 aa15.08■□□□□ 0.01
SGCE-202ENST00000415788 CTTNBP2NLQ9P2B4 639 aa15.08■□□□□ 0.01
SGCE-202ENST00000415788 EPS15L1Q9UBC2 864 aa15.08■□□□□ 0.01
SGCE-202ENST00000415788 ARHGAP26Q9UNA1 814 aa15.08■□□□□ 0.01
SGCE-202ENST00000415788 A0A0A6YYK5 440 aaPredicted RBP15.08■□□□□ 0
SGCE-202ENST00000415788 TMEM191CA6NGB0 347 aa15.08■□□□□ 0
SGCE-202ENST00000415788 DPYSL4O14531 572 aa15.08■□□□□ 0
SGCE-202ENST00000415788 TBX18O95935 607 aa15.08■□□□□ 0
SGCE-202ENST00000415788 LAMP2P13473 410 aa15.08■□□□□ 0
SGCE-202ENST00000415788 GPD1P21695 349 aa15.08■□□□□ 0
SGCE-202ENST00000415788 SDC4P31431 198 aa15.08■□□□□ 0
SGCE-202ENST00000415788 GBP1P32455 592 aa15.08■□□□□ 0
SGCE-202ENST00000415788 LSP1P33241 339 aa15.08■□□□□ 0
SGCE-202ENST00000415788 RFC1P35251 1148 aaPredicted RBP15.08■□□□□ 0
SGCE-202ENST00000415788 PTPN9P43378 593 aa15.08■□□□□ 0
SGCE-202ENST00000415788 NAP1L1P55209 391 aaKnown RBP15.08■□□□□ 0
SGCE-202ENST00000415788 COG7P83436 770 aa15.08■□□□□ 0
SGCE-202ENST00000415788 TFF2Q03403 129 aa15.08■□□□□ 0
SGCE-202ENST00000415788 FBXW10Q5XX13 1052 aa15.08■□□□□ 0
SGCE-202ENST00000415788 DDX42Q86XP3 938 aaKnown RBP eCLIP15.08■□□□□ 0
SGCE-202ENST00000415788 ARFGAP2Q8N6H7 521 aa15.08■□□□□ 0
SGCE-202ENST00000415788 EMC1Q8N766 993 aa15.08■□□□□ 0
SGCE-202ENST00000415788 TDRD5Q8NAT2 981 aaKnown RBP15.08■□□□□ 0
SGCE-202ENST00000415788 JOSD2Q8TAC2 188 aa15.08■□□□□ 0
SGCE-202ENST00000415788 DQX1Q8TE96 717 aaKnown RBP15.08■□□□□ 0
SGCE-202ENST00000415788 ATXN2LQ8WWM7 1075 aaKnown RBP15.08■□□□□ 0
SGCE-202ENST00000415788 RXFP2Q8WXD0 754 aa15.08■□□□□ 0
SGCE-202ENST00000415788 SMARCD2Q92925 531 aa15.08■□□□□ 0
SGCE-202ENST00000415788 NT5C3BQ969T7 300 aa15.08■□□□□ 0
SGCE-202ENST00000415788 ARHGEF26Q96DR7 871 aa15.08■□□□□ 0
SGCE-202ENST00000415788 CALR3Q96L12 384 aaKnown RBP15.08■□□□□ 0
SGCE-202ENST00000415788 ZSWIM3Q96MP5 696 aa15.08■□□□□ 0
SGCE-202ENST00000415788 ASB16Q96NS5 453 aa15.08■□□□□ 0
SGCE-202ENST00000415788 TRPV4Q9HBA0 871 aa15.08■□□□□ 0
SGCE-202ENST00000415788 PRDM6Q9NQX0 595 aa15.08■□□□□ 0
SGCE-202ENST00000415788 TDP1Q9NUW8 608 aa15.08■□□□□ 0
SGCE-202ENST00000415788 RASAL2Q9UJF2 1139 aa15.08■□□□□ 0
SGCE-202ENST00000415788 MYO16Q9Y6X6 1858 aa15.07■□□□□ 0
SGCE-202ENST00000415788 NOTCH4Q99466 2003 aa15.07■□□□□ 0
SGCE-202ENST00000415788 ZNF638Q14966 1978 aaKnown RBP15.07■□□□□ 0
SGCE-202ENST00000415788 F9P00740 461 aa15.07■□□□□ 0
SGCE-202ENST00000415788 ZNF143P52747 638 aaPredicted RBP15.07■□□□□ 0
SGCE-202ENST00000415788 RPL7AP62424 266 aaKnown RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms