RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 FLRT2O43155 660 aa16.28■□□□□ 0.2
SBDSP1-201ENST00000415772 ZBED1O96006 694 aa16.28■□□□□ 0.2
SBDSP1-201ENST00000415772 DNTTP04053 509 aa16.28■□□□□ 0.2
SBDSP1-201ENST00000415772 GTF2H1P32780 548 aa16.28■□□□□ 0.2
SBDSP1-201ENST00000415772 AFF3P51826 1226 aaKnown RBP16.28■□□□□ 0.2
SBDSP1-201ENST00000415772 TKTL1P51854 596 aa16.28■□□□□ 0.2
SBDSP1-201ENST00000415772 ZNF445P59923 1031 aa16.28■□□□□ 0.2
SBDSP1-201ENST00000415772 HLA-BQ31612 363 aa16.28■□□□□ 0.2
SBDSP1-201ENST00000415772 C1orf220Q5T0J3 134 aa16.28■□□□□ 0.2
SBDSP1-201ENST00000415772 TCERG1LQ5VWI1 586 aa16.28■□□□□ 0.2
SBDSP1-201ENST00000415772 C19orf48Q6RUI8 117 aa16.28■□□□□ 0.2
SBDSP1-201ENST00000415772 PIGZQ86VD9 579 aa16.28■□□□□ 0.2
SBDSP1-201ENST00000415772 SIX6OS1Q8N1H7 587 aa16.28■□□□□ 0.2
SBDSP1-201ENST00000415772 FBXL13Q8NEE6 735 aa16.28■□□□□ 0.2
SBDSP1-201ENST00000415772 OR2T3Q8NH03 318 aa16.28■□□□□ 0.2
SBDSP1-201ENST00000415772 WFIKKN2Q8TEU8 576 aa16.28■□□□□ 0.2
SBDSP1-201ENST00000415772 SORCS1Q8WY21 1168 aa16.28■□□□□ 0.2
SBDSP1-201ENST00000415772 PIWIL1Q96J94 861 aaKnown RBP16.28■□□□□ 0.2
SBDSP1-201ENST00000415772 UBXN6Q9BZV1 441 aa16.28■□□□□ 0.2
SBDSP1-201ENST00000415772 PCED1AQ9H1Q7 454 aa16.28■□□□□ 0.2
SBDSP1-201ENST00000415772 ASCC3Q8N3C0 2202 aaKnown RBP16.28■□□□□ 0.2
SBDSP1-201ENST00000415772 A0A1W2PQ27 194 aa16.27■□□□□ 0.2
SBDSP1-201ENST00000415772 A0A1W2PQ64 194 aa16.27■□□□□ 0.2
SBDSP1-201ENST00000415772 ZNF883P0CG24 379 aa16.27■□□□□ 0.2
SBDSP1-201ENST00000415772 EPB41P11171 864 aaKnown RBP16.27■□□□□ 0.2
SBDSP1-201ENST00000415772 HOXB3P14651 431 aaPredicted RBP16.27■□□□□ 0.2
SBDSP1-201ENST00000415772 PRKCHP24723 683 aa16.27■□□□□ 0.2
SBDSP1-201ENST00000415772 COPAP53621 1224 aa16.27■□□□□ 0.2
SBDSP1-201ENST00000415772 YWHAEP62258 255 aaKnown RBP16.27■□□□□ 0.2
SBDSP1-201ENST00000415772 ENPEPQ07075 957 aa16.27■□□□□ 0.2
SBDSP1-201ENST00000415772 ENPP2Q13822 863 aa16.27■□□□□ 0.2
SBDSP1-201ENST00000415772 NFIL3Q16649 462 aa16.27■□□□□ 0.2
SBDSP1-201ENST00000415772 TTC31Q49AM3 519 aaPredicted RBP16.27■□□□□ 0.2
SBDSP1-201ENST00000415772 FMNL3Q8IVF7 1028 aa16.27■□□□□ 0.2
SBDSP1-201ENST00000415772 GANCQ8TET4 914 aa16.27■□□□□ 0.2
SBDSP1-201ENST00000415772 FAXDC2Q96IV6 333 aa16.27■□□□□ 0.2
SBDSP1-201ENST00000415772 ULBP1Q9BZM6 244 aa16.27■□□□□ 0.2
SBDSP1-201ENST00000415772 IL21RQ9HBE5 538 aa16.27■□□□□ 0.2
SBDSP1-201ENST00000415772 RAB20Q9NX57 234 aa16.27■□□□□ 0.2
SBDSP1-201ENST00000415772 PI4KAP42356 2102 aa16.27■□□□□ 0.19
SBDSP1-201ENST00000415772 FAM237AA0A1B0GTK4 181 aa16.26■□□□□ 0.19
SBDSP1-201ENST00000415772 A0A1B0GVT2 93 aa16.26■□□□□ 0.19
SBDSP1-201ENST00000415772 EIF4E1BA6NMX2 242 aaKnown RBP16.26■□□□□ 0.19
SBDSP1-201ENST00000415772 RHOBTB3O94955 611 aa16.26■□□□□ 0.19
SBDSP1-201ENST00000415772 ATP5BP06576 529 aaKnown RBP16.26■□□□□ 0.19
SBDSP1-201ENST00000415772 HLA-EP13747 358 aa16.26■□□□□ 0.19
SBDSP1-201ENST00000415772 CD19P15391 556 aa16.26■□□□□ 0.19
SBDSP1-201ENST00000415772 CSNK1EP49674 416 aaKnown RBP16.26■□□□□ 0.19
SBDSP1-201ENST00000415772 BCAT1P54687 386 aa16.26■□□□□ 0.19
SBDSP1-201ENST00000415772 GOLGA7BQ2TAP0 167 aa16.26■□□□□ 0.19
SBDSP1-201ENST00000415772 INAVAQ3KP66 663 aa16.26■□□□□ 0.19
SBDSP1-201ENST00000415772 SGO2Q562F6 1265 aa16.26■□□□□ 0.19
SBDSP1-201ENST00000415772 CCDC157Q569K6 752 aa16.26■□□□□ 0.19
SBDSP1-201ENST00000415772 CCNI2Q6ZMN8 369 aaPredicted RBP16.26■□□□□ 0.19
SBDSP1-201ENST00000415772 CHST9Q7L1S5 443 aa16.26■□□□□ 0.19
SBDSP1-201ENST00000415772 GLRX5Q86SX6 157 aa16.26■□□□□ 0.19
SBDSP1-201ENST00000415772 CCDC117Q8IWD4 279 aaPredicted RBP16.26■□□□□ 0.19
SBDSP1-201ENST00000415772 GUF1Q8N442 669 aaKnown RBP16.26■□□□□ 0.19
SBDSP1-201ENST00000415772 ANKRD52Q8NB46 1076 aa16.26■□□□□ 0.19
SBDSP1-201ENST00000415772 SLC4A11Q8NBS3 891 aa16.26■□□□□ 0.19
SBDSP1-201ENST00000415772 GOLGA1Q92805 767 aa16.26■□□□□ 0.19
SBDSP1-201ENST00000415772 TMA16Q96EY4 203 aaKnown RBP16.26■□□□□ 0.19
SBDSP1-201ENST00000415772 BTBD1Q9H0C5 482 aa16.26■□□□□ 0.19
SBDSP1-201ENST00000415772 FBRSQ9HAH7 460 aa16.26■□□□□ 0.19
SBDSP1-201ENST00000415772 NCKAP1Q9Y2A7 1128 aa16.26■□□□□ 0.19
SBDSP1-201ENST00000415772 HBS1LQ9Y450 684 aaKnown RBP16.26■□□□□ 0.19
SBDSP1-201ENST00000415772 MYO18AQ92614 2054 aaKnown RBP16.26■□□□□ 0.19
SBDSP1-201ENST00000415772 TYW5A2RUC4 315 aaKnown RBP16.25■□□□□ 0.19
SBDSP1-201ENST00000415772 CETN3O15182 167 aa16.25■□□□□ 0.19
SBDSP1-201ENST00000415772 FSBPO95073 299 aa16.25■□□□□ 0.19
SBDSP1-201ENST00000415772 IGLV3-19P01714 112 aa16.25■□□□□ 0.19
SBDSP1-201ENST00000415772 POLR2EP19388 210 aaKnown RBP16.25■□□□□ 0.19
SBDSP1-201ENST00000415772 RAD23BP54727 409 aa16.25■□□□□ 0.19
SBDSP1-201ENST00000415772 ST8SIA6P61647 398 aa16.25■□□□□ 0.19
SBDSP1-201ENST00000415772 BST2Q10589 180 aaKnown RBP16.25■□□□□ 0.19
SBDSP1-201ENST00000415772 SFSWAPQ12872 951 aaKnown RBP16.25■□□□□ 0.19
SBDSP1-201ENST00000415772 DCAF17Q5H9S7 520 aaPredicted RBP16.25■□□□□ 0.19
SBDSP1-201ENST00000415772 ARHGAP17Q68EM7 881 aa16.25■□□□□ 0.19
SBDSP1-201ENST00000415772 AHI1Q8N157 1196 aa16.25■□□□□ 0.19
SBDSP1-201ENST00000415772 GALNT15Q8N3T1 639 aa16.25■□□□□ 0.19
SBDSP1-201ENST00000415772 ZNF557Q8N988 423 aaPredicted RBP16.25■□□□□ 0.19
SBDSP1-201ENST00000415772 CYB5D2Q8WUJ1 264 aa16.25■□□□□ 0.19
SBDSP1-201ENST00000415772 ABCB8Q9NUT2 735 aa16.25■□□□□ 0.19
SBDSP1-201ENST00000415772 KIAA1522Q9P206 1035 aaPredicted RBP16.25■□□□□ 0.19
SBDSP1-201ENST00000415772 TSPAN16Q9UKR8 245 aa16.25■□□□□ 0.19
SBDSP1-201ENST00000415772 HPSEQ9Y251 543 aa16.25■□□□□ 0.19
SBDSP1-201ENST00000415772 FNDC3AQ9Y2H6 1198 aaKnown RBP16.25■□□□□ 0.19
SBDSP1-201ENST00000415772 PCDHGB2Q9Y5G2 931 aa16.25■□□□□ 0.19
SBDSP1-201ENST00000415772 XPO1O14980 1071 aaKnown RBP16.24■□□□□ 0.19
SBDSP1-201ENST00000415772 RNASEH1O60930 286 aaKnown RBP16.24■□□□□ 0.19
SBDSP1-201ENST00000415772 SEMA4FO95754 770 aa16.24■□□□□ 0.19
SBDSP1-201ENST00000415772 PRR29P0C7W0 189 aa16.24■□□□□ 0.19
SBDSP1-201ENST00000415772 HOXD9P28356 352 aaPredicted RBP16.24■□□□□ 0.19
SBDSP1-201ENST00000415772 C21orf59P57076 290 aa16.24■□□□□ 0.19
SBDSP1-201ENST00000415772 PDE4CQ08493 712 aa16.24■□□□□ 0.19
SBDSP1-201ENST00000415772 ADIGQ0VDE8 80 aa16.24■□□□□ 0.19
SBDSP1-201ENST00000415772 CAMK2GQ13555 558 aaPredicted RBP16.24■□□□□ 0.19
SBDSP1-201ENST00000415772 TRIP4Q15650 581 aaPredicted RBP16.24■□□□□ 0.19
SBDSP1-201ENST00000415772 RAB41Q5JT25 222 aa16.24■□□□□ 0.19
SBDSP1-201ENST00000415772 SLCO6A1Q86UG4 719 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms