RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 RBM15Q96T37 977 aaKnown RBP eCLIP11.99□□□□□ -0.49
RFFL-205ENST00000415395 FRMD8P1Q9BZ68 369 aaPredicted RBP11.99□□□□□ -0.49
RFFL-205ENST00000415395 SSU72Q9NP77 194 aaKnown RBP11.99□□□□□ -0.49
RFFL-205ENST00000415395 RRN3Q9NYV6 651 aa11.99□□□□□ -0.49
RFFL-205ENST00000415395 SLC24A2Q9UI40 661 aa11.99□□□□□ -0.49
RFFL-205ENST00000415395 STAP1Q9ULZ2 295 aa11.99□□□□□ -0.49
RFFL-205ENST00000415395 ZNF487B1APH4 448 aa11.98□□□□□ -0.49
RFFL-205ENST00000415395 H7C4K7 107 aa11.98□□□□□ -0.49
RFFL-205ENST00000415395 SMAPO00193 183 aa11.98□□□□□ -0.49
RFFL-205ENST00000415395 DNALI1O14645 258 aaPredicted RBP11.98□□□□□ -0.49
RFFL-205ENST00000415395 LIN7AO14910 233 aaPredicted RBP11.98□□□□□ -0.49
RFFL-205ENST00000415395 MDM4O15151 490 aa11.98□□□□□ -0.49
RFFL-205ENST00000415395 GRAP2O75791 330 aa11.98□□□□□ -0.49
RFFL-205ENST00000415395 UNC5CO95185 931 aa11.98□□□□□ -0.49
RFFL-205ENST00000415395 ANP32DO95626 131 aa11.98□□□□□ -0.49
RFFL-205ENST00000415395 RAG1P15918 1043 aa11.98□□□□□ -0.49
RFFL-205ENST00000415395 ATP2A2P16615 1042 aaKnown RBP11.98□□□□□ -0.49
RFFL-205ENST00000415395 IL1R2P27930 398 aa11.98□□□□□ -0.49
RFFL-205ENST00000415395 NOS2P35228 1153 aa11.98□□□□□ -0.49
RFFL-205ENST00000415395 GJC1P36383 396 aa11.98□□□□□ -0.49
RFFL-205ENST00000415395 CDKN2BP42772 138 aa11.98□□□□□ -0.49
RFFL-205ENST00000415395 GATMP50440 423 aa11.98□□□□□ -0.49
RFFL-205ENST00000415395 DAOAP59103 153 aa11.98□□□□□ -0.49
RFFL-205ENST00000415395 NAA25Q14CX7 972 aa11.98□□□□□ -0.49
RFFL-205ENST00000415395 MORF4L2Q15014 288 aa11.98□□□□□ -0.49
RFFL-205ENST00000415395 ZKSCAN8Q15776 578 aaPredicted RBP11.98□□□□□ -0.49
RFFL-205ENST00000415395 SLC25A52Q3SY17 297 aa11.98□□□□□ -0.49
RFFL-205ENST00000415395 FYB2Q5VWT5 728 aa11.98□□□□□ -0.49
RFFL-205ENST00000415395 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.98□□□□□ -0.49
RFFL-205ENST00000415395 CENPUQ71F23 418 aa11.98□□□□□ -0.49
RFFL-205ENST00000415395 BEND5Q7L4P6 421 aa11.98□□□□□ -0.49
RFFL-205ENST00000415395 ANKS1BQ7Z6G8 1248 aa11.98□□□□□ -0.49
RFFL-205ENST00000415395 LRRTM3Q86VH5 581 aa11.98□□□□□ -0.49
RFFL-205ENST00000415395 ZNF398Q8TD17 642 aa11.98□□□□□ -0.49
RFFL-205ENST00000415395 LRRC8CQ8TDW0 803 aa11.98□□□□□ -0.49
RFFL-205ENST00000415395 CLEC4CQ8WTT0 213 aa11.98□□□□□ -0.49
RFFL-205ENST00000415395 FAM172AQ8WUF8 416 aa11.98□□□□□ -0.49
RFFL-205ENST00000415395 ATG4AQ8WYN0 398 aa11.98□□□□□ -0.49
RFFL-205ENST00000415395 NT5C3BQ969T7 300 aa11.98□□□□□ -0.49
RFFL-205ENST00000415395 TMEM237Q96Q45 408 aa11.98□□□□□ -0.49
RFFL-205ENST00000415395 SLC2A13Q96QE2 648 aa11.98□□□□□ -0.49
RFFL-205ENST00000415395 POPDC2Q9HBU9 364 aa11.98□□□□□ -0.49
RFFL-205ENST00000415395 TMLHEQ9NVH6 421 aa11.98□□□□□ -0.49
RFFL-205ENST00000415395 FETUBQ9UGM5 382 aa11.98□□□□□ -0.49
RFFL-205ENST00000415395 SUFUQ9UMX1 484 aa11.98□□□□□ -0.49
RFFL-205ENST00000415395 DRG1Q9Y295 367 aaKnown RBP11.98□□□□□ -0.49
RFFL-205ENST00000415395 NEU2Q9Y3R4 380 aa11.98□□□□□ -0.49
RFFL-205ENST00000415395 hCG_1818297A0A087WSY0 165 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 LRRD1A4D1F6 860 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 TRIM43BA6NCK2 446 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 C3orf70A6NLC5 250 aaPredicted RBP11.97□□□□□ -0.49
RFFL-205ENST00000415395 TP73O15350 636 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 ENDOD1O94919 500 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 ZBED1O96006 694 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 LMNAP02545 664 aaKnown RBP11.97□□□□□ -0.49
RFFL-205ENST00000415395 BDNFP23560 247 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 KDELR1P24390 212 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 MAGEA11P43364 429 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 ALDH7A1P49419 539 aaKnown RBP11.97□□□□□ -0.49
RFFL-205ENST00000415395 BCAR1P56945 870 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 KCNJ2P63252 427 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 PDK2Q15119 407 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 TAF5Q15542 800 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 TRIP13Q15645 432 aaPredicted RBP11.97□□□□□ -0.49
RFFL-205ENST00000415395 C15orf59Q2T9L4 293 aaPredicted RBP11.97□□□□□ -0.49
RFFL-205ENST00000415395 P3H1Q32P28 736 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 CTXN3Q4LDR2 81 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 ATP13A4Q4VNC1 1196 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 FAM171A1Q5VUB5 890 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 TXNRD3NBQ6F5E7 133 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 PM20D1Q6GTS8 502 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 MFSD7Q6UXD7 560 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 ANKS3Q6ZW76 656 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 BNIPLQ7Z465 357 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 TRABD2AQ86V40 505 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 PSTKQ8IV42 348 aaKnown RBP11.97□□□□□ -0.49
RFFL-205ENST00000415395 MAP7D3Q8IWC1 876 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 AGAP11Q8TF27 550 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 C2orf15Q8WU43 125 aaKnown RBP11.97□□□□□ -0.49
RFFL-205ENST00000415395 NSMCE1Q8WV22 266 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 FAM149B1Q96BN6 582 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 TRIM43Q96BQ3 446 aaPredicted RBP11.97□□□□□ -0.49
RFFL-205ENST00000415395 ZNF689Q96CS4 500 aaPredicted RBP11.97□□□□□ -0.49
RFFL-205ENST00000415395 STAMBPL1Q96FJ0 436 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 LRRC37BQ96QE4 947 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 TMEM209Q96SK2 561 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 KCNK16Q96T55 309 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 TUBB6Q9BUF5 446 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 GPR62Q9BZJ7 368 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 ULBP1Q9BZM6 244 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 LRMDAQ9H2I8 198 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 ZWILCHQ9H900 591 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 SAYSD1Q9NPB0 183 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 NGRNQ9NPE2 291 aaKnown RBP11.97□□□□□ -0.49
RFFL-205ENST00000415395 SHOC2Q9UQ13 582 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 USP3Q9Y6I4 520 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 PLXNA3P51805 1871 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 EFEMP2O95967 443 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 KRT15P19012 456 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 TAC1P20366 129 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms