RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 ZNF778Q96MU6 729 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 ECSITQ9BQ95 431 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 SLC4A5Q9BY07 1137 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 NRDE2Q9H7Z3 1164 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 PDP2Q9P2J9 529 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 DCDC2Q9UHG0 476 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 TSPAN16Q9UKR8 245 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 LRRC37A2A6NM11 1700 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 WDR90Q96KV7 1748 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 GLRA3O75311 464 aa10.1□□□□□ -0.79
CD44-206ENST00000415148 MYL4P12829 197 aa10.1□□□□□ -0.79
CD44-206ENST00000415148 CRABP2P29373 138 aa10.1□□□□□ -0.79
CD44-206ENST00000415148 GSTT1P30711 240 aa10.1□□□□□ -0.79
CD44-206ENST00000415148 CPOXP36551 454 aa10.1□□□□□ -0.79
CD44-206ENST00000415148 PHKA2P46019 1235 aa10.1□□□□□ -0.79
CD44-206ENST00000415148 NDST1P52848 882 aa10.1□□□□□ -0.79
CD44-206ENST00000415148 CDO1Q16878 200 aa10.1□□□□□ -0.79
CD44-206ENST00000415148 HSDL1Q3SXM5 330 aa10.1□□□□□ -0.79
CD44-206ENST00000415148 PKDCCQ504Y2 493 aa10.1□□□□□ -0.79
CD44-206ENST00000415148 SFT2D3Q587I9 215 aa10.1□□□□□ -0.79
CD44-206ENST00000415148 TRMT10BQ6PF06 316 aaKnown RBP10.1□□□□□ -0.79
CD44-206ENST00000415148 OLFML1Q6UWY5 402 aa10.1□□□□□ -0.79
CD44-206ENST00000415148 ZNF534Q76KX8 674 aa10.1□□□□□ -0.79
CD44-206ENST00000415148 ADGRF2Q8IZF7 708 aa10.1□□□□□ -0.79
CD44-206ENST00000415148 CCDC33Q8N5R6 958 aa10.1□□□□□ -0.79
CD44-206ENST00000415148 PIWIL2Q8TC59 973 aaKnown RBP10.1□□□□□ -0.79
CD44-206ENST00000415148 FAM172AQ8WUF8 416 aa10.1□□□□□ -0.79
CD44-206ENST00000415148 DEPDC1BQ8WUY9 529 aa10.1□□□□□ -0.79
CD44-206ENST00000415148 ZFAND2BQ8WV99 257 aa10.1□□□□□ -0.79
CD44-206ENST00000415148 RILPQ96NA2 401 aa10.1□□□□□ -0.79
CD44-206ENST00000415148 CAMKK2Q96RR4 588 aa10.1□□□□□ -0.79
CD44-206ENST00000415148 SNRNP25Q9BV90 132 aaKnown RBP10.1□□□□□ -0.79
CD44-206ENST00000415148 FAM192AQ9GZU8 254 aa10.1□□□□□ -0.79
CD44-206ENST00000415148 ASCC2Q9H1I8 757 aaPredicted RBP10.1□□□□□ -0.79
CD44-206ENST00000415148 BTBD7Q9P203 1132 aa10.1□□□□□ -0.79
CD44-206ENST00000415148 MORF4L1Q9UBU8 362 aa10.1□□□□□ -0.79
CD44-206ENST00000415148 SOX13Q9UN79 622 aa10.1□□□□□ -0.79
CD44-206ENST00000415148 A0A088AWK7 358 aa10.1□□□□□ -0.79
CD44-206ENST00000415148 HACD1B0YJ81 288 aa10.1□□□□□ -0.79
CD44-206ENST00000415148 ITM2AO43736 263 aa10.1□□□□□ -0.79
CD44-206ENST00000415148 METTL18O95568 372 aa10.1□□□□□ -0.79
CD44-206ENST00000415148 CYP3A5P20815 502 aa10.1□□□□□ -0.79
CD44-206ENST00000415148 SCNN1AP37088 669 aa10.1□□□□□ -0.79
CD44-206ENST00000415148 FDFT1P37268 417 aa10.1□□□□□ -0.79
CD44-206ENST00000415148 PTPN9P43378 593 aa10.1□□□□□ -0.79
CD44-206ENST00000415148 MSLNQ13421 630 aaPredicted RBP10.1□□□□□ -0.79
CD44-206ENST00000415148 TMEM132DQ14C87 1099 aa10.1□□□□□ -0.79
CD44-206ENST00000415148 DPYSL2Q16555 572 aa10.1□□□□□ -0.79
CD44-206ENST00000415148 INSCQ1MX18 579 aa10.1□□□□□ -0.79
CD44-206ENST00000415148 SLC10A6Q3KNW5 377 aa10.1□□□□□ -0.79
CD44-206ENST00000415148 MROH9Q5TGP6 573 aa10.1□□□□□ -0.79
CD44-206ENST00000415148 SESTD1Q86VW0 696 aa10.1□□□□□ -0.79
CD44-206ENST00000415148 UNC5BQ8IZJ1 945 aa10.1□□□□□ -0.79
CD44-206ENST00000415148 MPP5Q8N3R9 675 aa10.1□□□□□ -0.79
CD44-206ENST00000415148 KHSRPQ92945 711 aaKnown RBP eCLIP10.1□□□□□ -0.79
CD44-206ENST00000415148 ATP2A3Q93084 1043 aa10.1□□□□□ -0.79
CD44-206ENST00000415148 EPAS1Q99814 870 aa10.1□□□□□ -0.79
CD44-206ENST00000415148 UBE2OQ9C0C9 1292 aaKnown RBP10.1□□□□□ -0.79
CD44-206ENST00000415148 MINDY3Q9H8M7 445 aa10.1□□□□□ -0.79
CD44-206ENST00000415148 CPSF2Q9P2I0 782 aaKnown RBP10.1□□□□□ -0.79
CD44-206ENST00000415148 MAD1L1Q9Y6D9 718 aa10.1□□□□□ -0.79
CD44-206ENST00000415148 CAPN15O75808 1086 aa10.09□□□□□ -0.79
CD44-206ENST00000415148 PDE5AO76074 875 aa10.09□□□□□ -0.79
CD44-206ENST00000415148 STK10O94804 968 aaKnown RBP10.09□□□□□ -0.79
CD44-206ENST00000415148 IQCF3P0C7M6 154 aa10.09□□□□□ -0.79
CD44-206ENST00000415148 CYP2F1P24903 491 aa10.09□□□□□ -0.79
CD44-206ENST00000415148 GRK2P25098 689 aa10.09□□□□□ -0.79
CD44-206ENST00000415148 L1CAMP32004 1257 aa10.09□□□□□ -0.79
CD44-206ENST00000415148 FASTKD1Q53R41 847 aaKnown RBP10.09□□□□□ -0.79
CD44-206ENST00000415148 ZNF484Q5JVG2 852 aa10.09□□□□□ -0.79
CD44-206ENST00000415148 C16orf46Q6P387 395 aa10.09□□□□□ -0.79
CD44-206ENST00000415148 SLC35F5Q8WV83 523 aa10.09□□□□□ -0.79
CD44-206ENST00000415148 CENPIQ92674 756 aaPredicted RBP10.09□□□□□ -0.79
CD44-206ENST00000415148 CDKL2Q92772 493 aa10.09□□□□□ -0.79
CD44-206ENST00000415148 PIWIL1Q96J94 861 aaKnown RBP10.09□□□□□ -0.79
CD44-206ENST00000415148 ZNF668Q96K58 619 aaPredicted RBP10.09□□□□□ -0.79
CD44-206ENST00000415148 QKIQ96PU8 341 aaKnown RBP eCLIP10.09□□□□□ -0.79
CD44-206ENST00000415148 GORASP1Q9BQQ3 440 aa10.09□□□□□ -0.79
CD44-206ENST00000415148 NAT9Q9BTE0 207 aa10.09□□□□□ -0.79
CD44-206ENST00000415148 SPATC1LQ9H0A9 340 aa10.09□□□□□ -0.79
CD44-206ENST00000415148 NGRNQ9NPE2 291 aaKnown RBP10.09□□□□□ -0.79
CD44-206ENST00000415148 DPP3Q9NY33 737 aa10.09□□□□□ -0.79
CD44-206ENST00000415148 ADAMTS6Q9UKP5 1117 aa10.09□□□□□ -0.79
CD44-206ENST00000415148 APOBEC2Q9Y235 224 aaKnown RBP10.09□□□□□ -0.79
CD44-206ENST00000415148 NR2E3Q9Y5X4 410 aa10.09□□□□□ -0.79
CD44-206ENST00000415148 A6NJR5 290 aa10.09□□□□□ -0.79
CD44-206ENST00000415148 SOCS7O14512 581 aa10.09□□□□□ -0.79
CD44-206ENST00000415148 OR6B1O95007 311 aa10.09□□□□□ -0.79
CD44-206ENST00000415148 ARIH2O95376 493 aa10.09□□□□□ -0.79
CD44-206ENST00000415148 GSRP00390 522 aa10.09□□□□□ -0.79
CD44-206ENST00000415148 DSG1Q02413 1049 aa10.09□□□□□ -0.79
CD44-206ENST00000415148 TUBB3Q13509 450 aa10.09□□□□□ -0.79
CD44-206ENST00000415148 HIC1Q14526 733 aa10.09□□□□□ -0.79
CD44-206ENST00000415148 AMHR2Q16671 573 aa10.09□□□□□ -0.79
CD44-206ENST00000415148 GOLGA7BQ2TAP0 167 aa10.09□□□□□ -0.79
CD44-206ENST00000415148 DALRD3Q5D0E6 543 aaKnown RBP10.09□□□□□ -0.79
CD44-206ENST00000415148 C1orf146Q5VVC0 180 aa10.09□□□□□ -0.79
CD44-206ENST00000415148 MBLAC2Q68D91 279 aa10.09□□□□□ -0.79
CD44-206ENST00000415148 CDR2LQ86X02 465 aaPredicted RBP10.09□□□□□ -0.79
CD44-206ENST00000415148 NCAPG2Q86XI2 1143 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms