RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 SEMA3BQ13214 749 aa14.78□□□□□ -0.04
SF3B1-204ENST00000414963 CLUL1Q15846 466 aa14.78□□□□□ -0.04
SF3B1-204ENST00000414963 PPP2R5EQ16537 467 aa14.78□□□□□ -0.04
SF3B1-204ENST00000414963 SMTNL2Q2TAL5 461 aa14.78□□□□□ -0.04
SF3B1-204ENST00000414963 EFHC2Q5JST6 749 aa14.78□□□□□ -0.04
SF3B1-204ENST00000414963 DNTTIP2Q5QJE6 756 aaKnown RBP14.78□□□□□ -0.04
SF3B1-204ENST00000414963 GPR158Q5T848 1215 aa14.78□□□□□ -0.04
SF3B1-204ENST00000414963 CREG2Q8IUH2 290 aa14.78□□□□□ -0.04
SF3B1-204ENST00000414963 CMTM8Q8IZV2 173 aa14.78□□□□□ -0.04
SF3B1-204ENST00000414963 MAB21L3Q8N8X9 362 aa14.78□□□□□ -0.04
SF3B1-204ENST00000414963 ACTRT1Q8TDG2 376 aa14.78□□□□□ -0.04
SF3B1-204ENST00000414963 TSC1Q92574 1164 aa14.78□□□□□ -0.04
SF3B1-204ENST00000414963 HSPH1Q92598 858 aa14.78□□□□□ -0.04
SF3B1-204ENST00000414963 BTN2A3PQ96KV6 586 aa14.78□□□□□ -0.04
SF3B1-204ENST00000414963 PCDH18Q9HCL0 1135 aa14.78□□□□□ -0.04
SF3B1-204ENST00000414963 RRAGDQ9NQL2 400 aaPredicted RBP14.78□□□□□ -0.04
SF3B1-204ENST00000414963 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.78□□□□□ -0.04
SF3B1-204ENST00000414963 RCOR3Q9P2K3 495 aaPredicted RBP14.78□□□□□ -0.04
SF3B1-204ENST00000414963 CDC23Q9UJX2 597 aa14.78□□□□□ -0.04
SF3B1-204ENST00000414963 ARHGAP26Q9UNA1 814 aa14.78□□□□□ -0.04
SF3B1-204ENST00000414963 NOTCH4Q99466 2003 aa14.77□□□□□ -0.04
SF3B1-204ENST00000414963 SRGAP2O75044 1071 aa14.77□□□□□ -0.05
SF3B1-204ENST00000414963 TBX10O75333 385 aa14.77□□□□□ -0.05
SF3B1-204ENST00000414963 PAGE1O75459 146 aa14.77□□□□□ -0.05
SF3B1-204ENST00000414963 STC2O76061 302 aa14.77□□□□□ -0.05
SF3B1-204ENST00000414963 LATS1O95835 1130 aa14.77□□□□□ -0.05
SF3B1-204ENST00000414963 MBL2P11226 248 aaPredicted RBP14.77□□□□□ -0.05
SF3B1-204ENST00000414963 TCF3P15923 654 aa14.77□□□□□ -0.05
SF3B1-204ENST00000414963 FSHRP23945 695 aa14.77□□□□□ -0.05
SF3B1-204ENST00000414963 IL4RP24394 825 aa14.77□□□□□ -0.05
SF3B1-204ENST00000414963 HTR7P34969 479 aa14.77□□□□□ -0.05
SF3B1-204ENST00000414963 GJC1P36383 396 aa14.77□□□□□ -0.05
SF3B1-204ENST00000414963 CETN2P41208 172 aa14.77□□□□□ -0.05
SF3B1-204ENST00000414963 CDKN2BP42772 138 aa14.77□□□□□ -0.05
SF3B1-204ENST00000414963 HARS2P49590 506 aaKnown RBP14.77□□□□□ -0.05
SF3B1-204ENST00000414963 DNA2P51530 1060 aa14.77□□□□□ -0.05
SF3B1-204ENST00000414963 KCNQ1P51787 676 aa14.77□□□□□ -0.05
SF3B1-204ENST00000414963 DLX2Q07687 328 aaPredicted RBP14.77□□□□□ -0.05
SF3B1-204ENST00000414963 CA9Q16790 459 aa14.77□□□□□ -0.05
SF3B1-204ENST00000414963 ATAT1Q5SQI0 421 aa14.77□□□□□ -0.05
SF3B1-204ENST00000414963 STXBP5Q5T5C0 1151 aa14.77□□□□□ -0.05
SF3B1-204ENST00000414963 CES5AQ6NT32 575 aa14.77□□□□□ -0.05
SF3B1-204ENST00000414963 MFSD7Q6UXD7 560 aa14.77□□□□□ -0.05
SF3B1-204ENST00000414963 SPOCD1Q6ZMY3 1216 aa14.77□□□□□ -0.05
SF3B1-204ENST00000414963 KIAA1958Q8N8K9 716 aa14.77□□□□□ -0.05
SF3B1-204ENST00000414963 ATP6V0D2Q8N8Y2 350 aa14.77□□□□□ -0.05
SF3B1-204ENST00000414963 ITFG1Q8TB96 612 aa14.77□□□□□ -0.05
SF3B1-204ENST00000414963 ADAMTS19Q8TE59 1207 aa14.77□□□□□ -0.05
SF3B1-204ENST00000414963 ACSF2Q96CM8 615 aaPredicted RBP14.77□□□□□ -0.05
SF3B1-204ENST00000414963 FAF2Q96CS3 445 aa14.77□□□□□ -0.05
SF3B1-204ENST00000414963 FAM161BQ96MY7 647 aa14.77□□□□□ -0.05
SF3B1-204ENST00000414963 KCTD15Q96SI1 283 aaPredicted RBP14.77□□□□□ -0.05
SF3B1-204ENST00000414963 PSMB7Q99436 277 aa14.77□□□□□ -0.05
SF3B1-204ENST00000414963 CDX2Q99626 313 aaPredicted RBP14.77□□□□□ -0.05
SF3B1-204ENST00000414963 DCLK3Q9C098 648 aa14.77□□□□□ -0.05
SF3B1-204ENST00000414963 DHX35Q9H5Z1 703 aaKnown RBP14.77□□□□□ -0.05
SF3B1-204ENST00000414963 L2HGDHQ9H9P8 463 aa14.77□□□□□ -0.05
SF3B1-204ENST00000414963 PRDM16Q9HAZ2 1276 aa14.77□□□□□ -0.05
SF3B1-204ENST00000414963 GKN1Q9NS71 199 aa14.77□□□□□ -0.05
SF3B1-204ENST00000414963 GPATCH2LQ9NWQ4 482 aa14.77□□□□□ -0.05
SF3B1-204ENST00000414963 CLDND1Q9NY35 253 aa14.77□□□□□ -0.05
SF3B1-204ENST00000414963 STOML2Q9UJZ1 356 aa14.77□□□□□ -0.05
SF3B1-204ENST00000414963 ANAPC1Q9H1A4 1944 aa14.76□□□□□ -0.05
SF3B1-204ENST00000414963 LRRD1A4D1F6 860 aa14.76□□□□□ -0.05
SF3B1-204ENST00000414963 PI4K2BG5E9Z4 385 aa14.76□□□□□ -0.05
SF3B1-204ENST00000414963 ZNF185O15231 689 aa14.76□□□□□ -0.05
SF3B1-204ENST00000414963 CEP104O60308 925 aa14.76□□□□□ -0.05
SF3B1-204ENST00000414963 GREM1O60565 184 aa14.76□□□□□ -0.05
SF3B1-204ENST00000414963 CKMP06732 381 aa14.76□□□□□ -0.05
SF3B1-204ENST00000414963 CEBPBP17676 345 aa14.76□□□□□ -0.05
SF3B1-204ENST00000414963 CDH6P55285 790 aa14.76□□□□□ -0.05
SF3B1-204ENST00000414963 ZXDBP98169 803 aa14.76□□□□□ -0.05
SF3B1-204ENST00000414963 ZNF211Q13398 564 aaPredicted RBP14.76□□□□□ -0.05
SF3B1-204ENST00000414963 DPYSL3Q14195 570 aa14.76□□□□□ -0.05
SF3B1-204ENST00000414963 WHAMMP3Q1A5X7 153 aa14.76□□□□□ -0.05
SF3B1-204ENST00000414963 ODF2Q5BJF6 829 aa14.76□□□□□ -0.05
SF3B1-204ENST00000414963 TFDP3Q5H9I0 405 aa14.76□□□□□ -0.05
SF3B1-204ENST00000414963 HABP4Q5JVS0 413 aaKnown RBP14.76□□□□□ -0.05
SF3B1-204ENST00000414963 ARTNQ5T4W7 220 aa14.76□□□□□ -0.05
SF3B1-204ENST00000414963 POTEHQ6S545 545 aa14.76□□□□□ -0.05
SF3B1-204ENST00000414963 HTR3DQ70Z44 454 aa14.76□□□□□ -0.05
SF3B1-204ENST00000414963 ANKS1BQ7Z6G8 1248 aa14.76□□□□□ -0.05
SF3B1-204ENST00000414963 DDX42Q86XP3 938 aaKnown RBP eCLIP14.76□□□□□ -0.05
SF3B1-204ENST00000414963 RNF25Q96BH1 459 aaPredicted RBP14.76□□□□□ -0.05
SF3B1-204ENST00000414963 RIPOR3Q96MK2 946 aa14.76□□□□□ -0.05
SF3B1-204ENST00000414963 ZNF670Q9BS34 389 aa14.76□□□□□ -0.05
SF3B1-204ENST00000414963 TMPRSS4Q9NRS4 437 aa14.76□□□□□ -0.05
SF3B1-204ENST00000414963 GDE1Q9NZC3 331 aa14.76□□□□□ -0.05
SF3B1-204ENST00000414963 OR12D3Q9UGF7 316 aa14.76□□□□□ -0.05
SF3B1-204ENST00000414963 MRFAP1Q9Y605 127 aa14.76□□□□□ -0.05
SF3B1-204ENST00000414963 CPQQ9Y646 472 aa14.76□□□□□ -0.05
SF3B1-204ENST00000414963 hCG_1818297A0A087WSY0 165 aa14.75□□□□□ -0.05
SF3B1-204ENST00000414963 KLKB1P03952 638 aa14.75□□□□□ -0.05
SF3B1-204ENST00000414963 CD48P09326 243 aa14.75□□□□□ -0.05
SF3B1-204ENST00000414963 AVPR1AP37288 418 aa14.75□□□□□ -0.05
SF3B1-204ENST00000414963 MTHFRP42898 656 aa14.75□□□□□ -0.05
SF3B1-204ENST00000414963 SLC11A2P49281 568 aa14.75□□□□□ -0.05
SF3B1-204ENST00000414963 KRT81Q14533 505 aa14.75□□□□□ -0.05
SF3B1-204ENST00000414963 ZFYVE27Q5T4F4 411 aa14.75□□□□□ -0.05
SF3B1-204ENST00000414963 SEL1L2Q5TEA6 688 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms