RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 ZC3H18Q86VM9 953 aaKnown RBP14.59□□□□□ -0.07
LIMS2-206ENST00000409754 PYROXD2Q8N2H3 581 aa14.59□□□□□ -0.07
LIMS2-206ENST00000409754 FAM71DQ8N9W8 422 aa14.59□□□□□ -0.07
LIMS2-206ENST00000409754 FAM76AQ8TAV0 307 aa14.59□□□□□ -0.07
LIMS2-206ENST00000409754 TIFAQ96CG3 184 aa14.59□□□□□ -0.07
LIMS2-206ENST00000409754 RTP4Q96DX8 246 aa14.59□□□□□ -0.07
LIMS2-206ENST00000409754 ATP6V1G3Q96LB4 118 aa14.59□□□□□ -0.07
LIMS2-206ENST00000409754 C8orf48Q96LL4 319 aa14.59□□□□□ -0.07
LIMS2-206ENST00000409754 YME1L1Q96TA2 773 aa14.59□□□□□ -0.07
LIMS2-206ENST00000409754 TMEM109Q9BVC6 243 aa14.59□□□□□ -0.07
LIMS2-206ENST00000409754 MAGEB5Q9BZ81 275 aa14.59□□□□□ -0.07
LIMS2-206ENST00000409754 GPR62Q9BZJ7 368 aa14.59□□□□□ -0.07
LIMS2-206ENST00000409754 DDIT4Q9NX09 232 aa14.59□□□□□ -0.07
LIMS2-206ENST00000409754 ABI2Q9NYB9 513 aaPredicted RBP14.59□□□□□ -0.07
LIMS2-206ENST00000409754 COX16Q9P0S2 106 aa14.59□□□□□ -0.07
LIMS2-206ENST00000409754 FBXW11Q9UKB1 542 aa14.59□□□□□ -0.07
LIMS2-206ENST00000409754 FARP1Q9Y4F1 1045 aaPredicted RBP14.59□□□□□ -0.07
LIMS2-206ENST00000409754 INSL6Q9Y581 213 aa14.59□□□□□ -0.07
LIMS2-206ENST00000409754 PCDHB5Q9Y5E4 795 aa14.59□□□□□ -0.07
LIMS2-206ENST00000409754 HEY1Q9Y5J3 304 aa14.59□□□□□ -0.07
LIMS2-206ENST00000409754 TRIM66O15016 1216 aa14.59□□□□□ -0.07
LIMS2-206ENST00000409754 GOT1P17174 413 aa14.59□□□□□ -0.07
LIMS2-206ENST00000409754 ARL13BQ3SXY8 428 aa14.59□□□□□ -0.07
LIMS2-206ENST00000409754 AGBL2Q5U5Z8 902 aa14.59□□□□□ -0.07
LIMS2-206ENST00000409754 Q7L0L9 218 aa14.59□□□□□ -0.07
LIMS2-206ENST00000409754 HOOK3Q86VS8 718 aa14.59□□□□□ -0.07
LIMS2-206ENST00000409754 CEP57Q86XR8 500 aa14.59□□□□□ -0.07
LIMS2-206ENST00000409754 CDKL3Q8IVW4 592 aaPredicted RBP14.59□□□□□ -0.07
LIMS2-206ENST00000409754 PPIL6Q8IXY8 311 aa14.59□□□□□ -0.07
LIMS2-206ENST00000409754 CMTR2Q8IYT2 770 aaKnown RBP14.59□□□□□ -0.07
LIMS2-206ENST00000409754 SCAMP5Q8TAC9 235 aa14.59□□□□□ -0.07
LIMS2-206ENST00000409754 RNF139Q8WU17 664 aa14.59□□□□□ -0.07
LIMS2-206ENST00000409754 C17orf80Q9BSJ5 609 aa14.59□□□□□ -0.07
LIMS2-206ENST00000409754 ZBED2Q9BTP6 218 aa14.59□□□□□ -0.07
LIMS2-206ENST00000409754 OXCT2Q9BYC2 517 aaPredicted RBP14.59□□□□□ -0.07
LIMS2-206ENST00000409754 USP29Q9HBJ7 922 aa14.59□□□□□ -0.07
LIMS2-206ENST00000409754 TTC4O95801 387 aa14.58□□□□□ -0.08
LIMS2-206ENST00000409754 AMPD1P23109 780 aa14.58□□□□□ -0.08
LIMS2-206ENST00000409754 PBX3P40426 434 aa14.58□□□□□ -0.08
LIMS2-206ENST00000409754 CXCR3P49682 368 aa14.58□□□□□ -0.08
LIMS2-206ENST00000409754 ZNF135P52742 658 aaPredicted RBP14.58□□□□□ -0.08
LIMS2-206ENST00000409754 YWHAGP61981 247 aaKnown RBP eCLIP14.58□□□□□ -0.08
LIMS2-206ENST00000409754 SMARCB1Q12824 385 aa14.58□□□□□ -0.08
LIMS2-206ENST00000409754 KRT71Q3SY84 523 aa14.58□□□□□ -0.08
LIMS2-206ENST00000409754 NCBP2-AS2Q69YL0 99 aa14.58□□□□□ -0.08
LIMS2-206ENST00000409754 BZW1Q7L1Q6 419 aaKnown RBP14.58□□□□□ -0.08
LIMS2-206ENST00000409754 TAC4Q86UU9 113 aa14.58□□□□□ -0.08
LIMS2-206ENST00000409754 ADAM32Q8TC27 787 aa14.58□□□□□ -0.08
LIMS2-206ENST00000409754 EDEM1Q92611 657 aa14.58□□□□□ -0.08
LIMS2-206ENST00000409754 PRCCQ92733 491 aaPredicted RBP14.58□□□□□ -0.08
LIMS2-206ENST00000409754 CLP1Q92989 425 aaKnown RBP14.58□□□□□ -0.08
LIMS2-206ENST00000409754 RBM15Q96T37 977 aaKnown RBP eCLIP14.58□□□□□ -0.08
LIMS2-206ENST00000409754 PHACTR1Q9C0D0 580 aa14.58□□□□□ -0.08
LIMS2-206ENST00000409754 ARHGEF4Q9NR80 690 aa14.58□□□□□ -0.08
LIMS2-206ENST00000409754 ABCC13Q9NSE7 274 aa14.58□□□□□ -0.08
LIMS2-206ENST00000409754 PSD3Q9NYI0 1048 aa14.58□□□□□ -0.08
LIMS2-206ENST00000409754 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.58□□□□□ -0.08
LIMS2-206ENST00000409754 VWA8A3KMH1 1905 aa14.58□□□□□ -0.08
LIMS2-206ENST00000409754 XIRP2A4UGR9 3374 aa14.57□□□□□ -0.08
LIMS2-206ENST00000409754 H7C4K7 107 aa14.57□□□□□ -0.08
LIMS2-206ENST00000409754 TBC1D4O60343 1298 aa14.57□□□□□ -0.08
LIMS2-206ENST00000409754 IGLV3-25P01717 112 aa14.57□□□□□ -0.08
LIMS2-206ENST00000409754 SHBGP04278 402 aa14.57□□□□□ -0.08
LIMS2-206ENST00000409754 ACTN2P35609 894 aa14.57□□□□□ -0.08
LIMS2-206ENST00000409754 HCAR3P49019 387 aa14.57□□□□□ -0.08
LIMS2-206ENST00000409754 GBE1Q04446 702 aa14.57□□□□□ -0.08
LIMS2-206ENST00000409754 SLC10A2Q12908 348 aaPredicted RBP14.57□□□□□ -0.08
LIMS2-206ENST00000409754 SEMA3BQ13214 749 aa14.57□□□□□ -0.08
LIMS2-206ENST00000409754 RAB30Q15771 203 aa14.57□□□□□ -0.08
LIMS2-206ENST00000409754 SLC45A4Q5BKX6 768 aa14.57□□□□□ -0.08
LIMS2-206ENST00000409754 TMEM173Q86WV6 379 aaPredicted RBP14.57□□□□□ -0.08
LIMS2-206ENST00000409754 SCN4BQ8IWT1 228 aa14.57□□□□□ -0.08
LIMS2-206ENST00000409754 NAT8LQ8N9F0 302 aa14.57□□□□□ -0.08
LIMS2-206ENST00000409754 DQX1Q8TE96 717 aaKnown RBP14.57□□□□□ -0.08
LIMS2-206ENST00000409754 CPT1BQ92523 772 aa14.57□□□□□ -0.08
LIMS2-206ENST00000409754 PWWP2AQ96N64 755 aa14.57□□□□□ -0.08
LIMS2-206ENST00000409754 CERS4Q9HA82 394 aa14.57□□□□□ -0.08
LIMS2-206ENST00000409754 TMPRSS4Q9NRS4 437 aa14.57□□□□□ -0.08
LIMS2-206ENST00000409754 TMEM51Q9NW97 253 aa14.57□□□□□ -0.08
LIMS2-206ENST00000409754 NINJ2Q9NZG7 142 aa14.57□□□□□ -0.08
LIMS2-206ENST00000409754 PAK5Q9P286 719 aa14.57□□□□□ -0.08
LIMS2-206ENST00000409754 MYO7AQ13402 2215 aa14.56□□□□□ -0.08
LIMS2-206ENST00000409754 HACD1B0YJ81 288 aa14.56□□□□□ -0.08
LIMS2-206ENST00000409754 EEF2KO00418 725 aaKnown RBP14.56□□□□□ -0.08
LIMS2-206ENST00000409754 KCNN4O15554 427 aa14.56□□□□□ -0.08
LIMS2-206ENST00000409754 RBL1P28749 1068 aa14.56□□□□□ -0.08
LIMS2-206ENST00000409754 EIF4EBP2Q13542 120 aaPredicted RBP14.56□□□□□ -0.08
LIMS2-206ENST00000409754 DPYSQ14117 519 aa14.56□□□□□ -0.08
LIMS2-206ENST00000409754 BTG3Q14201 252 aaPredicted RBP14.56□□□□□ -0.08
LIMS2-206ENST00000409754 UBAP2Q5T6F2 1119 aaKnown RBP14.56□□□□□ -0.08
LIMS2-206ENST00000409754 BTBD8Q5XKL5 378 aa14.56□□□□□ -0.08
LIMS2-206ENST00000409754 PPP2R2DQ66LE6 453 aa14.56□□□□□ -0.08
LIMS2-206ENST00000409754 KCTD16Q68DU8 428 aa14.56□□□□□ -0.08
LIMS2-206ENST00000409754 C4orf22Q6V702 233 aa14.56□□□□□ -0.08
LIMS2-206ENST00000409754 RFX8Q6ZV50 586 aa14.56□□□□□ -0.08
LIMS2-206ENST00000409754 ANKS3Q6ZW76 656 aa14.56□□□□□ -0.08
LIMS2-206ENST00000409754 NUP93Q8N1F7 819 aa14.56□□□□□ -0.08
LIMS2-206ENST00000409754 BCL7CQ8WUZ0 217 aaPredicted RBP14.56□□□□□ -0.08
LIMS2-206ENST00000409754 OLFM3Q96PB7 478 aa14.56□□□□□ -0.08
LIMS2-206ENST00000409754 QKIQ96PU8 341 aaKnown RBP eCLIP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms