RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 STXBP5Q5T5C0 1151 aa10.96□□□□□ -0.65
NIF3L1-204ENST00000409357 RNASEH2BQ5TBB1 312 aaKnown RBP10.96□□□□□ -0.65
NIF3L1-204ENST00000409357 IRAK1BP1Q5VVH5 260 aa10.96□□□□□ -0.65
NIF3L1-204ENST00000409357 TTBK2Q6IQ55 1244 aa10.96□□□□□ -0.65
NIF3L1-204ENST00000409357 AGMOQ6ZNB7 445 aa10.96□□□□□ -0.65
NIF3L1-204ENST00000409357 ZNF354CQ86Y25 554 aa10.96□□□□□ -0.65
NIF3L1-204ENST00000409357 CRLF3Q8IUI8 442 aa10.96□□□□□ -0.65
NIF3L1-204ENST00000409357 TPH2Q8IWU9 490 aa10.96□□□□□ -0.65
NIF3L1-204ENST00000409357 COLGALT2Q8IYK4 626 aa10.96□□□□□ -0.65
NIF3L1-204ENST00000409357 FAM71AQ8IYT1 594 aa10.96□□□□□ -0.65
NIF3L1-204ENST00000409357 TRIML2Q8N7C3 387 aa10.96□□□□□ -0.65
NIF3L1-204ENST00000409357 PDPRQ8NCN5 879 aa10.96□□□□□ -0.65
NIF3L1-204ENST00000409357 EXD1Q8NHP7 514 aa10.96□□□□□ -0.65
NIF3L1-204ENST00000409357 PPP4R1Q8TF05 950 aa10.96□□□□□ -0.65
NIF3L1-204ENST00000409357 PAWRQ96IZ0 340 aaKnown RBP10.96□□□□□ -0.65
NIF3L1-204ENST00000409357 TEX13BQ9BXU2 312 aa10.96□□□□□ -0.65
NIF3L1-204ENST00000409357 FRMD8P1Q9BZ68 369 aaPredicted RBP10.96□□□□□ -0.65
NIF3L1-204ENST00000409357 GLT8D2Q9H1C3 349 aa10.96□□□□□ -0.65
NIF3L1-204ENST00000409357 VPS37BQ9H9H4 285 aa10.96□□□□□ -0.65
NIF3L1-204ENST00000409357 HOMER2Q9NSB8 354 aa10.96□□□□□ -0.65
NIF3L1-204ENST00000409357 SLC17A7Q9P2U7 560 aa10.96□□□□□ -0.65
NIF3L1-204ENST00000409357 SEL1LQ9UBV2 794 aa10.96□□□□□ -0.65
NIF3L1-204ENST00000409357 STK39Q9UEW8 545 aa10.96□□□□□ -0.65
NIF3L1-204ENST00000409357 RIMS3Q9UJD0 308 aa10.96□□□□□ -0.65
NIF3L1-204ENST00000409357 FEM1BQ9UK73 627 aa10.96□□□□□ -0.65
NIF3L1-204ENST00000409357 SLC8A2Q9UPR5 921 aa10.96□□□□□ -0.65
NIF3L1-204ENST00000409357 FRMPD2Q68DX3 1309 aaPredicted RBP10.96□□□□□ -0.66
NIF3L1-204ENST00000409357 DENND3A2RUS2 1198 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 ARHGAP42A6NI28 874 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 PRR5-ARHGAP8B1AHC4 643 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 E9PMD0 336 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 MCF2LO15068 1137 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 TBX3O15119 743 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 SIN3BO75182 1162 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 TDP2O95551 362 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 SLC25A27O95847 323 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 KRT18P05783 430 aaKnown RBP10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 ALOX5P09917 674 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 C6orf222P0C671 652 aaPredicted RBP10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 CYBAP13498 195 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 SLC16A2P36021 539 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 CPA2P48052 419 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 CASP4P49662 377 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 ADCY7P51828 1080 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 CASP5P51878 434 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 STAT2P52630 851 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 GPX6P59796 221 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 ARHGAP8P85298 464 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 MYL7Q01449 175 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 KDSRQ06136 332 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 CETN1Q12798 172 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 ACAD10Q6JQN1 1059 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 RFX8Q6ZV50 586 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 SLFN12Q8IYM2 578 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 ARL10Q8N8L6 244 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 STON2Q8WXE9 905 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 SLC5A5Q92911 643 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 PWWP2AQ96N64 755 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 PAFAH2Q99487 392 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 MMP19Q99542 508 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 SERPINI1Q99574 410 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 OSBPL11Q9BXB4 747 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 IMPG2Q9BZV3 1241 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 PNPLA8Q9NP80 782 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 PNPLA3Q9NST1 481 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 DNAJC17Q9NVM6 304 aaKnown RBP10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 HACD3Q9P035 362 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 SEPT3Q9UH03 358 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 OGDHLQ9ULD0 1010 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 KIAA1024Q9UPX6 916 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 GNEQ9Y223 722 aaKnown RBP10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 ERGIC3Q9Y282 383 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 CARD8Q9Y2G2 431 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 IFT52Q9Y366 437 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 AP4S1Q9Y587 144 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 A0A0B4J269 797 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 C19orf67A6NJJ6 358 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 KPNA4O00629 521 aaPredicted RBP10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 AQP9O43315 295 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 RSL1D1O76021 490 aaKnown RBP10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 ATP6V1B1P15313 513 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 PSMC3P17980 439 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 BGNP21810 368 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 SERPINB6P35237 376 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 TIE1P35590 1138 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 STT3AP46977 705 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 RXRGP48443 463 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 GSSP48637 474 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 IKQ13123 557 aaPredicted RBP10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 TUBB3Q13509 450 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 PSMD6Q15008 389 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 TRIP13Q15645 432 aaPredicted RBP10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 PHKG1Q16816 387 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 RGS21Q2M5E4 152 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 TEX44Q53QW1 395 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 MFSD14CQ5VZR4 134 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 KRT39Q6A163 491 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 STXBP4Q6ZWJ1 553 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 EEPD1Q7L9B9 569 aa10.95□□□□□ -0.66
NIF3L1-204ENST00000409357 CARM1Q86X55 608 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms