RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 ACOT1Q86TX2 421 aa13.49□□□□□ -0.25
CHRNA1-203ENST00000409219 EID2Q8N6I1 236 aa13.49□□□□□ -0.25
CHRNA1-203ENST00000409219 RDH13Q8NBN7 331 aa13.49□□□□□ -0.25
CHRNA1-203ENST00000409219 ZNF516Q92618 1163 aa13.49□□□□□ -0.25
CHRNA1-203ENST00000409219 SYAP1Q96A49 352 aaPredicted RBP13.49□□□□□ -0.25
CHRNA1-203ENST00000409219 ELMO3Q96BJ8 720 aa13.49□□□□□ -0.25
CHRNA1-203ENST00000409219 CCDC127Q96BQ5 260 aa13.49□□□□□ -0.25
CHRNA1-203ENST00000409219 NAF1Q96HR8 494 aaKnown RBP13.49□□□□□ -0.25
CHRNA1-203ENST00000409219 ARID3AQ99856 593 aa13.49□□□□□ -0.25
CHRNA1-203ENST00000409219 TMEM245Q9H330 911 aa13.49□□□□□ -0.25
CHRNA1-203ENST00000409219 VRTNQ9H8Y1 702 aa13.49□□□□□ -0.25
CHRNA1-203ENST00000409219 CPNE5Q9HCH3 593 aa13.49□□□□□ -0.25
CHRNA1-203ENST00000409219 KIAA1586Q9HCI6 787 aa13.49□□□□□ -0.25
CHRNA1-203ENST00000409219 PANK4Q9NVE7 773 aa13.49□□□□□ -0.25
CHRNA1-203ENST00000409219 HMGXB4Q9UGU5 601 aa13.49□□□□□ -0.25
CHRNA1-203ENST00000409219 BSNQ9UPA5 3926 aa13.49□□□□□ -0.25
CHRNA1-203ENST00000409219 H3BQV1 296 aa13.48□□□□□ -0.25
CHRNA1-203ENST00000409219 WISP1O95388 367 aa13.48□□□□□ -0.25
CHRNA1-203ENST00000409219 DNTTP04053 509 aa13.48□□□□□ -0.25
CHRNA1-203ENST00000409219 C6P13671 934 aa13.48□□□□□ -0.25
CHRNA1-203ENST00000409219 GLDCP23378 1020 aa13.48□□□□□ -0.25
CHRNA1-203ENST00000409219 ATICP31939 592 aa13.48□□□□□ -0.25
CHRNA1-203ENST00000409219 TMPRSS3P57727 454 aa13.48□□□□□ -0.25
CHRNA1-203ENST00000409219 RPS14P62263 151 aaKnown RBP13.48□□□□□ -0.25
CHRNA1-203ENST00000409219 ARID5AQ03989 594 aa13.48□□□□□ -0.25
CHRNA1-203ENST00000409219 CYP24A1Q07973 514 aa13.48□□□□□ -0.25
CHRNA1-203ENST00000409219 TRPC3Q13507 836 aa13.48□□□□□ -0.25
CHRNA1-203ENST00000409219 ARHGAP40Q5TG30 622 aa13.48□□□□□ -0.25
CHRNA1-203ENST00000409219 KIAA0895LQ68EN5 471 aa13.48□□□□□ -0.25
CHRNA1-203ENST00000409219 CLEC20AQ6ZU45 233 aa13.48□□□□□ -0.25
CHRNA1-203ENST00000409219 ZNF248Q8NDW4 579 aa13.48□□□□□ -0.25
CHRNA1-203ENST00000409219 TTC9Q92623 222 aa13.48□□□□□ -0.25
CHRNA1-203ENST00000409219 JAKMIP2Q96AA8 810 aa13.48□□□□□ -0.25
CHRNA1-203ENST00000409219 SGK2Q9HBY8 427 aa13.48□□□□□ -0.25
CHRNA1-203ENST00000409219 FAM49BQ9NUQ9 324 aa13.48□□□□□ -0.25
CHRNA1-203ENST00000409219 CLCA2Q9UQC9 943 aa13.48□□□□□ -0.25
CHRNA1-203ENST00000409219 ZNF510Q9Y2H8 683 aa13.48□□□□□ -0.25
CHRNA1-203ENST00000409219 A0A1W2PPC4 97 aa13.48□□□□□ -0.25
CHRNA1-203ENST00000409219 CORO1AP31146 461 aaKnown RBP13.48□□□□□ -0.25
CHRNA1-203ENST00000409219 PCBP4P57723 403 aaKnown RBP13.48□□□□□ -0.25
CHRNA1-203ENST00000409219 ZBTB16Q05516 673 aa13.48□□□□□ -0.25
CHRNA1-203ENST00000409219 ZNF699Q32M78 642 aa13.48□□□□□ -0.25
CHRNA1-203ENST00000409219 TTC31Q49AM3 519 aaPredicted RBP13.48□□□□□ -0.25
CHRNA1-203ENST00000409219 FNDC3BQ53EP0 1204 aaKnown RBP13.48□□□□□ -0.25
CHRNA1-203ENST00000409219 SFMBT2Q5VUG0 894 aa13.48□□□□□ -0.25
CHRNA1-203ENST00000409219 CACTIN-AS1Q8N1I8 211 aa13.48□□□□□ -0.25
CHRNA1-203ENST00000409219 DCBLD1Q8N8Z6 715 aa13.48□□□□□ -0.25
CHRNA1-203ENST00000409219 CYB5D2Q8WUJ1 264 aa13.48□□□□□ -0.25
CHRNA1-203ENST00000409219 RFFLQ8WZ73 363 aa13.48□□□□□ -0.25
CHRNA1-203ENST00000409219 HPS3Q969F9 1004 aa13.48□□□□□ -0.25
CHRNA1-203ENST00000409219 FBRSQ9HAH7 460 aa13.48□□□□□ -0.25
CHRNA1-203ENST00000409219 EBF2Q9HAK2 575 aa13.48□□□□□ -0.25
CHRNA1-203ENST00000409219 CCDC39Q9UFE4 941 aa13.48□□□□□ -0.25
CHRNA1-203ENST00000409219 NAGPAQ9UK23 515 aa13.48□□□□□ -0.25
CHRNA1-203ENST00000409219 AGO1Q9UL18 857 aaKnown RBP13.48□□□□□ -0.25
CHRNA1-203ENST00000409219 SLC28A2O43868 658 aa13.47□□□□□ -0.25
CHRNA1-203ENST00000409219 HMBSP08397 361 aa13.47□□□□□ -0.25
CHRNA1-203ENST00000409219 FAM200BP0CF97 657 aa13.47□□□□□ -0.25
CHRNA1-203ENST00000409219 HLA-FP30511 346 aa13.47□□□□□ -0.25
CHRNA1-203ENST00000409219 INSM1Q01101 510 aaPredicted RBP13.47□□□□□ -0.25
CHRNA1-203ENST00000409219 SRSF1Q07955 248 aaKnown RBP eCLIP13.47□□□□□ -0.25
CHRNA1-203ENST00000409219 ILKQ13418 452 aa13.47□□□□□ -0.25
CHRNA1-203ENST00000409219 BECN1Q14457 450 aa13.47□□□□□ -0.25
CHRNA1-203ENST00000409219 ZNF667Q5HYK9 610 aa13.47□□□□□ -0.25
CHRNA1-203ENST00000409219 RRAGBQ5VZM2 374 aa13.47□□□□□ -0.25
CHRNA1-203ENST00000409219 SCD5Q86SK9 330 aa13.47□□□□□ -0.25
CHRNA1-203ENST00000409219 DENND1CQ8IV53 801 aa13.47□□□□□ -0.25
CHRNA1-203ENST00000409219 CPXM2Q8N436 756 aa13.47□□□□□ -0.25
CHRNA1-203ENST00000409219 C12orf29Q8N999 325 aa13.47□□□□□ -0.25
CHRNA1-203ENST00000409219 HIC2Q96JB3 615 aa13.47□□□□□ -0.25
CHRNA1-203ENST00000409219 SLC2A11Q9BYW1 496 aa13.47□□□□□ -0.25
CHRNA1-203ENST00000409219 PRSS16Q9NQE7 514 aa13.47□□□□□ -0.25
CHRNA1-203ENST00000409219 AGPAT3Q9NRZ7 376 aa13.47□□□□□ -0.25
CHRNA1-203ENST00000409219 RASAL2Q9UJF2 1139 aa13.47□□□□□ -0.25
CHRNA1-203ENST00000409219 PCDHB1Q9Y5F3 818 aa13.47□□□□□ -0.25
CHRNA1-203ENST00000409219 PCDHA5Q9Y5H7 936 aa13.47□□□□□ -0.25
CHRNA1-203ENST00000409219 FAM47DPA6NHR8 397 aa13.46□□□□□ -0.25
CHRNA1-203ENST00000409219 YKT6O15498 198 aa13.46□□□□□ -0.25
CHRNA1-203ENST00000409219 TIMM44O43615 452 aa13.46□□□□□ -0.25
CHRNA1-203ENST00000409219 CLSTN1O94985 981 aa13.46□□□□□ -0.25
CHRNA1-203ENST00000409219 CYBBP04839 570 aa13.46□□□□□ -0.25
CHRNA1-203ENST00000409219 HOXD9P28356 352 aaPredicted RBP13.46□□□□□ -0.25
CHRNA1-203ENST00000409219 GJB2P29033 226 aa13.46□□□□□ -0.25
CHRNA1-203ENST00000409219 ADORA2BP29275 332 aa13.46□□□□□ -0.25
CHRNA1-203ENST00000409219 CYP2J2P51589 502 aa13.46□□□□□ -0.25
CHRNA1-203ENST00000409219 UCNP55089 124 aa13.46□□□□□ -0.25
CHRNA1-203ENST00000409219 BNIP3Q12983 259 aa13.46□□□□□ -0.25
CHRNA1-203ENST00000409219 BROXQ5VW32 411 aa13.46□□□□□ -0.25
CHRNA1-203ENST00000409219 KDM7AQ6ZMT4 941 aa13.46□□□□□ -0.25
CHRNA1-203ENST00000409219 KANSL1Q7Z3B3 1105 aa13.46□□□□□ -0.25
CHRNA1-203ENST00000409219 CCDC186Q7Z3E2 898 aa13.46□□□□□ -0.25
CHRNA1-203ENST00000409219 ZNF276Q8N554 614 aa13.46□□□□□ -0.25
CHRNA1-203ENST00000409219 DDI1Q8WTU0 396 aa13.46□□□□□ -0.25
CHRNA1-203ENST00000409219 HNRNPABQ99729 332 aaKnown RBP13.46□□□□□ -0.25
CHRNA1-203ENST00000409219 DCLK3Q9C098 648 aa13.46□□□□□ -0.25
CHRNA1-203ENST00000409219 GDF3Q9NR23 364 aa13.46□□□□□ -0.25
CHRNA1-203ENST00000409219 SERGEFQ9UGK8 458 aa13.46□□□□□ -0.25
CHRNA1-203ENST00000409219 PIEZO2Q9H5I5 2752 aa13.46□□□□□ -0.26
CHRNA1-203ENST00000409219 NYNRINQ9P2P1 1898 aaKnown RBP13.45□□□□□ -0.26
CHRNA1-203ENST00000409219 A0A087X0B3 334 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms