RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 OSER1Q9NX31 292 aa13.4□□□□□ -0.26
SNORD88B-201ENST00000408454 RRN3Q9NYV6 651 aa13.4□□□□□ -0.26
SNORD88B-201ENST00000408454 KIAA1468Q9P260 1216 aa13.4□□□□□ -0.26
SNORD88B-201ENST00000408454 THAP10Q9P2Z0 257 aaPredicted RBP13.4□□□□□ -0.26
SNORD88B-201ENST00000408454 TJP2Q9UDY2 1190 aa13.4□□□□□ -0.26
SNORD88B-201ENST00000408454 NCKAP1Q9Y2A7 1128 aa13.4□□□□□ -0.26
SNORD88B-201ENST00000408454 TLR6Q9Y2C9 796 aa13.4□□□□□ -0.26
SNORD88B-201ENST00000408454 KIAA1549LQ6ZVL6 1849 aa13.39□□□□□ -0.27
SNORD88B-201ENST00000408454 LNP1A1A4G5 178 aa13.39□□□□□ -0.27
SNORD88B-201ENST00000408454 GOLGA6L22H0YM25 854 aa13.39□□□□□ -0.27
SNORD88B-201ENST00000408454 GREM1O60565 184 aa13.39□□□□□ -0.27
SNORD88B-201ENST00000408454 OPHN1O60890 802 aa13.39□□□□□ -0.27
SNORD88B-201ENST00000408454 NCAM1P13591 858 aa13.39□□□□□ -0.27
SNORD88B-201ENST00000408454 NOVA1P51513 510 aaKnown RBP13.39□□□□□ -0.27
SNORD88B-201ENST00000408454 SLC12A1Q13621 1099 aa13.39□□□□□ -0.27
SNORD88B-201ENST00000408454 CDH18Q13634 790 aa13.39□□□□□ -0.27
SNORD88B-201ENST00000408454 TEAD4Q15561 434 aa13.39□□□□□ -0.27
SNORD88B-201ENST00000408454 EXOC3L4Q17RC7 722 aa13.39□□□□□ -0.27
SNORD88B-201ENST00000408454 ZDHHC17Q8IUH5 632 aa13.39□□□□□ -0.27
SNORD88B-201ENST00000408454 ATP6V0D2Q8N8Y2 350 aa13.39□□□□□ -0.27
SNORD88B-201ENST00000408454 ANKRD20A12PQ8NF67 263 aa13.39□□□□□ -0.27
SNORD88B-201ENST00000408454 BHMTQ93088 406 aa13.39□□□□□ -0.27
SNORD88B-201ENST00000408454 ELMO3Q96BJ8 720 aa13.39□□□□□ -0.27
SNORD88B-201ENST00000408454 THAP9Q9H5L6 903 aa13.39□□□□□ -0.27
SNORD88B-201ENST00000408454 NUDT5Q9UKK9 219 aa13.39□□□□□ -0.27
SNORD88B-201ENST00000408454 DAAM1Q9Y4D1 1078 aa13.39□□□□□ -0.27
SNORD88B-201ENST00000408454 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.38□□□□□ -0.27
SNORD88B-201ENST00000408454 UPK3BL1B0FP48 263 aa13.38□□□□□ -0.27
SNORD88B-201ENST00000408454 UPK3BL2E5RIL1 263 aa13.38□□□□□ -0.27
SNORD88B-201ENST00000408454 DCLK1O15075 740 aa13.38□□□□□ -0.27
SNORD88B-201ENST00000408454 MDM4O15151 490 aa13.38□□□□□ -0.27
SNORD88B-201ENST00000408454 DNTTP04053 509 aa13.38□□□□□ -0.27
SNORD88B-201ENST00000408454 EPHX1P07099 455 aa13.38□□□□□ -0.27
SNORD88B-201ENST00000408454 CISD3P0C7P0 127 aa13.38□□□□□ -0.27
SNORD88B-201ENST00000408454 NDUFV2P19404 249 aa13.38□□□□□ -0.27
SNORD88B-201ENST00000408454 ABCB4P21439 1286 aa13.38□□□□□ -0.27
SNORD88B-201ENST00000408454 GNA15P30679 374 aa13.38□□□□□ -0.27
SNORD88B-201ENST00000408454 MTIF2P46199 727 aaKnown RBP13.38□□□□□ -0.27
SNORD88B-201ENST00000408454 PMS1P54277 932 aaKnown RBP13.38□□□□□ -0.27
SNORD88B-201ENST00000408454 SHC2P98077 582 aa13.38□□□□□ -0.27
SNORD88B-201ENST00000408454 SULT2A1Q06520 285 aa13.38□□□□□ -0.27
SNORD88B-201ENST00000408454 CCDC15Q0P6D6 951 aa13.38□□□□□ -0.27
SNORD88B-201ENST00000408454 INAVAQ3KP66 663 aa13.38□□□□□ -0.27
SNORD88B-201ENST00000408454 FNDC3BQ53EP0 1204 aaKnown RBP13.38□□□□□ -0.27
SNORD88B-201ENST00000408454 EFHC1Q5JVL4 640 aa13.38□□□□□ -0.27
SNORD88B-201ENST00000408454 RABGAP1LQ5R372 815 aa13.38□□□□□ -0.27
SNORD88B-201ENST00000408454 EMC10Q5UCC4 262 aa13.38□□□□□ -0.27
SNORD88B-201ENST00000408454 CREBRFQ8IUR6 639 aa13.38□□□□□ -0.27
SNORD88B-201ENST00000408454 MFN1Q8IWA4 741 aa13.38□□□□□ -0.27
SNORD88B-201ENST00000408454 TMEFF1Q8IYR6 380 aa13.38□□□□□ -0.27
SNORD88B-201ENST00000408454 UBA3Q8TBC4 463 aa13.38□□□□□ -0.27
SNORD88B-201ENST00000408454 MRGPRX1Q96LB2 322 aa13.38□□□□□ -0.27
SNORD88B-201ENST00000408454 INTS2Q9H0H0 1204 aaKnown RBP13.38□□□□□ -0.27
SNORD88B-201ENST00000408454 PDCL3Q9H2J4 239 aa13.38□□□□□ -0.27
SNORD88B-201ENST00000408454 SYNCQ9H7C4 482 aa13.38□□□□□ -0.27
SNORD88B-201ENST00000408454 POPDC2Q9HBU9 364 aa13.38□□□□□ -0.27
SNORD88B-201ENST00000408454 UBE2TQ9NPD8 197 aaPredicted RBP13.38□□□□□ -0.27
SNORD88B-201ENST00000408454 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.38□□□□□ -0.27
SNORD88B-201ENST00000408454 CACNA2D2Q9NY47 1150 aa13.38□□□□□ -0.27
SNORD88B-201ENST00000408454 PLK2Q9NYY3 685 aa13.38□□□□□ -0.27
SNORD88B-201ENST00000408454 APEX2Q9UBZ4 518 aa13.38□□□□□ -0.27
SNORD88B-201ENST00000408454 PILRBQ9UKJ0 227 aa13.38□□□□□ -0.27
SNORD88B-201ENST00000408454 CNTN6Q9UQ52 1028 aa13.38□□□□□ -0.27
SNORD88B-201ENST00000408454 SPTBN4Q9H254 2564 aa13.37□□□□□ -0.27
SNORD88B-201ENST00000408454 RALGAPA1Q6GYQ0 2036 aa13.37□□□□□ -0.27
SNORD88B-201ENST00000408454 CACNA1AO00555 2505 aa13.37□□□□□ -0.27
SNORD88B-201ENST00000408454 IGHV1OR15-9A0A0B4J2B8 117 aa13.37□□□□□ -0.27
SNORD88B-201ENST00000408454 A0A1B0GTW7 788 aa13.37□□□□□ -0.27
SNORD88B-201ENST00000408454 A0A1W2PQF6 199 aa13.37□□□□□ -0.27
SNORD88B-201ENST00000408454 YJEFN3A6XGL0 299 aa13.37□□□□□ -0.27
SNORD88B-201ENST00000408454 C4orf47A7E2U8 309 aa13.37□□□□□ -0.27
SNORD88B-201ENST00000408454 PPP1R3GB7ZBB8 358 aa13.37□□□□□ -0.27
SNORD88B-201ENST00000408454 E7ENQ6 273 aa13.37□□□□□ -0.27
SNORD88B-201ENST00000408454 BIN1O00499 593 aa13.37□□□□□ -0.27
SNORD88B-201ENST00000408454 THAP12O43422 761 aa13.37□□□□□ -0.27
SNORD88B-201ENST00000408454 GDF9O60383 454 aa13.37□□□□□ -0.27
SNORD88B-201ENST00000408454 ACSL4O60488 711 aa13.37□□□□□ -0.27
SNORD88B-201ENST00000408454 KCNK5O95279 499 aa13.37□□□□□ -0.27
SNORD88B-201ENST00000408454 CER1O95813 267 aa13.37□□□□□ -0.27
SNORD88B-201ENST00000408454 KLKB1P03952 638 aa13.37□□□□□ -0.27
SNORD88B-201ENST00000408454 DLDP09622 509 aaKnown RBP13.37□□□□□ -0.27
SNORD88B-201ENST00000408454 PABPC1P11940 636 aaKnown RBP13.37□□□□□ -0.27
SNORD88B-201ENST00000408454 KRT9P35527 623 aa13.37□□□□□ -0.27
SNORD88B-201ENST00000408454 YWHAZP63104 245 aaKnown RBP13.37□□□□□ -0.27
SNORD88B-201ENST00000408454 CDK17Q00537 523 aa13.37□□□□□ -0.27
SNORD88B-201ENST00000408454 ENPP2Q13822 863 aa13.37□□□□□ -0.27
SNORD88B-201ENST00000408454 SUZ12Q15022 739 aaKnown RBP13.37□□□□□ -0.27
SNORD88B-201ENST00000408454 PKDCCQ504Y2 493 aa13.37□□□□□ -0.27
SNORD88B-201ENST00000408454 ISM2Q6H9L7 571 aa13.37□□□□□ -0.27
SNORD88B-201ENST00000408454 SND1Q7KZF4 910 aaKnown RBP eCLIP13.37□□□□□ -0.27
SNORD88B-201ENST00000408454 DSG4Q86SJ6 1040 aa13.37□□□□□ -0.27
SNORD88B-201ENST00000408454 TMPRSS6Q8IU80 811 aa13.37□□□□□ -0.27
SNORD88B-201ENST00000408454 UBR7Q8N806 425 aa13.37□□□□□ -0.27
SNORD88B-201ENST00000408454 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.37□□□□□ -0.27
SNORD88B-201ENST00000408454 OR2T3Q8NH03 318 aa13.37□□□□□ -0.27
SNORD88B-201ENST00000408454 EDEM1Q92611 657 aa13.37□□□□□ -0.27
SNORD88B-201ENST00000408454 ZNF419Q96HQ0 510 aaPredicted RBP13.37□□□□□ -0.27
SNORD88B-201ENST00000408454 BTN2A3PQ96KV6 586 aa13.37□□□□□ -0.27
SNORD88B-201ENST00000408454 HSPA12BQ96MM6 686 aa13.37□□□□□ -0.27
SNORD88B-201ENST00000408454 ITM2CQ9NQX7 267 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms