RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 VPS4BO75351 444 aa13.68□□□□□ -0.22
SNED1-205ENST00000405547 LDLRP01130 860 aa13.68□□□□□ -0.22
SNED1-205ENST00000405547 FAM86B2P0C5J1 330 aa13.68□□□□□ -0.22
SNED1-205ENST00000405547 MLNP12872 115 aa13.68□□□□□ -0.22
SNED1-205ENST00000405547 ADRA1DP25100 572 aa13.68□□□□□ -0.22
SNED1-205ENST00000405547 LHX1P48742 406 aa13.68□□□□□ -0.22
SNED1-205ENST00000405547 SLC11A2P49281 568 aa13.68□□□□□ -0.22
SNED1-205ENST00000405547 CCT8P50990 548 aa13.68□□□□□ -0.22
SNED1-205ENST00000405547 WASHC5Q12768 1159 aa13.68□□□□□ -0.22
SNED1-205ENST00000405547 FRG1Q14331 258 aaKnown RBP13.68□□□□□ -0.22
SNED1-205ENST00000405547 ACER1Q8TDN7 264 aa13.68□□□□□ -0.22
SNED1-205ENST00000405547 ADGRE3Q9BY15 652 aa13.68□□□□□ -0.22
SNED1-205ENST00000405547 MEI4A8MW99 385 aa13.67□□□□□ -0.22
SNED1-205ENST00000405547 DYNC1LI2O43237 492 aaPredicted RBP13.67□□□□□ -0.22
SNED1-205ENST00000405547 PLA2G6O60733 806 aa13.67□□□□□ -0.22
SNED1-205ENST00000405547 KRT20P35900 424 aa13.67□□□□□ -0.22
SNED1-205ENST00000405547 NPY2RP49146 381 aa13.67□□□□□ -0.22
SNED1-205ENST00000405547 VPS72Q15906 364 aa13.67□□□□□ -0.22
SNED1-205ENST00000405547 TTC27Q6P3X3 843 aa13.67□□□□□ -0.22
SNED1-205ENST00000405547 ZPBP2Q6X784 338 aa13.67□□□□□ -0.22
SNED1-205ENST00000405547 BAP1Q92560 729 aa13.67□□□□□ -0.22
SNED1-205ENST00000405547 DDX18Q9NVP1 670 aaKnown RBP13.67□□□□□ -0.22
SNED1-205ENST00000405547 TMCC3Q9ULS5 477 aa13.67□□□□□ -0.22
SNED1-205ENST00000405547 ST8SIA6P61647 398 aa13.67□□□□□ -0.22
SNED1-205ENST00000405547 TDRD10Q5VZ19 366 aaKnown RBP13.67□□□□□ -0.22
SNED1-205ENST00000405547 DUPD1Q68J44 220 aa13.67□□□□□ -0.22
SNED1-205ENST00000405547 SVOPQ8N4V2 548 aa13.67□□□□□ -0.22
SNED1-205ENST00000405547 POU5F2Q8N7G0 328 aa13.67□□□□□ -0.22
SNED1-205ENST00000405547 SEPT5Q99719 369 aaPredicted RBP13.67□□□□□ -0.22
SNED1-205ENST00000405547 CLPBQ9H078 707 aa13.67□□□□□ -0.22
SNED1-205ENST00000405547 DSEQ9UL01 958 aa13.67□□□□□ -0.22
SNED1-205ENST00000405547 ASTN2O75129 1339 aaPredicted RBP13.67□□□□□ -0.22
SNED1-205ENST00000405547 B3GAT3O94766 335 aa13.67□□□□□ -0.22
SNED1-205ENST00000405547 MMP14P50281 582 aa13.67□□□□□ -0.22
SNED1-205ENST00000405547 FAAP100Q0VG06 881 aa13.67□□□□□ -0.22
SNED1-205ENST00000405547 CSHL1Q14406 222 aa13.67□□□□□ -0.22
SNED1-205ENST00000405547 TTC30BQ8N4P2 665 aa13.67□□□□□ -0.22
SNED1-205ENST00000405547 SPATA20Q8TB22 786 aa13.67□□□□□ -0.22
SNED1-205ENST00000405547 C1orf232A0A0U1RR37 186 aa13.67□□□□□ -0.22
SNED1-205ENST00000405547 TBC1D12O60347 775 aa13.67□□□□□ -0.22
SNED1-205ENST00000405547 HMGCRP04035 888 aa13.67□□□□□ -0.22
SNED1-205ENST00000405547 TSHRP16473 764 aa13.67□□□□□ -0.22
SNED1-205ENST00000405547 DCTN2Q13561 401 aaKnown RBP13.67□□□□□ -0.22
SNED1-205ENST00000405547 MGAT5BQ3V5L5 792 aa13.67□□□□□ -0.22
SNED1-205ENST00000405547 SCARA3Q6AZY7 606 aa13.67□□□□□ -0.22
SNED1-205ENST00000405547 FAM71AQ8IYT1 594 aa13.67□□□□□ -0.22
SNED1-205ENST00000405547 STN1Q9H668 368 aaKnown RBP13.67□□□□□ -0.22
SNED1-205ENST00000405547 C15orf38-AP3S2A0A0A6YYH1 394 aa13.67□□□□□ -0.22
SNED1-205ENST00000405547 F8W810 466 aa13.67□□□□□ -0.22
SNED1-205ENST00000405547 CLOCKO15516 846 aa13.67□□□□□ -0.22
SNED1-205ENST00000405547 BAIAP3O94812 1187 aa13.67□□□□□ -0.22
SNED1-205ENST00000405547 SERPIND1P05546 499 aa13.67□□□□□ -0.22
SNED1-205ENST00000405547 BACE1P56817 501 aa13.67□□□□□ -0.22
SNED1-205ENST00000405547 DDR2Q16832 855 aa13.67□□□□□ -0.22
SNED1-205ENST00000405547 ARPINQ7Z6K5 226 aa13.67□□□□□ -0.22
SNED1-205ENST00000405547 ATG16L2Q8NAA4 619 aa13.67□□□□□ -0.22
SNED1-205ENST00000405547 CDRT15Q96T59 188 aa13.67□□□□□ -0.22
SNED1-205ENST00000405547 ELP3Q9H9T3 547 aa13.67□□□□□ -0.22
SNED1-205ENST00000405547 CHST7Q9NS84 486 aa13.67□□□□□ -0.22
SNED1-205ENST00000405547 TSPAN16Q9UKR8 245 aa13.67□□□□□ -0.22
SNED1-205ENST00000405547 MON2Q7Z3U7 1717 aa13.67□□□□□ -0.22
SNED1-205ENST00000405547 ADARP55265 1226 aaKnown RBP13.67□□□□□ -0.22
SNED1-205ENST00000405547 LAMTOR4Q0VGL1 99 aa13.67□□□□□ -0.22
SNED1-205ENST00000405547 MIER2Q8N344 545 aa13.67□□□□□ -0.22
SNED1-205ENST00000405547 NUDT12Q9BQG2 462 aa13.67□□□□□ -0.22
SNED1-205ENST00000405547 ENOPH1Q9UHY7 261 aa13.67□□□□□ -0.22
SNED1-205ENST00000405547 TMEM114B3SHH9 223 aa13.66□□□□□ -0.22
SNED1-205ENST00000405547 IL1R1P14778 569 aa13.66□□□□□ -0.22
SNED1-205ENST00000405547 NCALDP61601 193 aa13.66□□□□□ -0.22
SNED1-205ENST00000405547 NFIAQ12857 509 aa13.66□□□□□ -0.22
SNED1-205ENST00000405547 DPYSL3Q14195 570 aa13.66□□□□□ -0.22
SNED1-205ENST00000405547 POU6F1Q14863 301 aa13.66□□□□□ -0.22
SNED1-205ENST00000405547 POLD3Q15054 466 aaPredicted RBP13.66□□□□□ -0.22
SNED1-205ENST00000405547 IQCKQ8N0W5 287 aa13.66□□□□□ -0.22
SNED1-205ENST00000405547 CCDC33Q8N5R6 958 aa13.66□□□□□ -0.22
SNED1-205ENST00000405547 DNERQ8NFT8 737 aa13.66□□□□□ -0.22
SNED1-205ENST00000405547 C1orf50Q9BV19 199 aa13.66□□□□□ -0.22
SNED1-205ENST00000405547 UGT2B28Q9BY64 529 aa13.66□□□□□ -0.22
SNED1-205ENST00000405547 HMG20AQ9NP66 347 aa13.66□□□□□ -0.22
SNED1-205ENST00000405547 A0A0U1RQJ8 604 aa13.66□□□□□ -0.22
SNED1-205ENST00000405547 C6orf222P0C671 652 aaPredicted RBP13.66□□□□□ -0.22
SNED1-205ENST00000405547 ATP6V1C1P21283 382 aa13.66□□□□□ -0.22
SNED1-205ENST00000405547 RAP1GAPP47736 663 aa13.66□□□□□ -0.22
SNED1-205ENST00000405547 NME5P56597 212 aa13.66□□□□□ -0.22
SNED1-205ENST00000405547 KCNJ2P63252 427 aa13.66□□□□□ -0.22
SNED1-205ENST00000405547 CNTN1Q12860 1018 aa13.66□□□□□ -0.22
SNED1-205ENST00000405547 C16orf72Q14CZ0 275 aa13.66□□□□□ -0.22
SNED1-205ENST00000405547 ARCQ7LC44 396 aa13.66□□□□□ -0.22
SNED1-205ENST00000405547 NT5DC4Q86YG4 428 aa13.66□□□□□ -0.22
SNED1-205ENST00000405547 APOL2Q9BQE5 337 aa13.66□□□□□ -0.22
SNED1-205ENST00000405547 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.66□□□□□ -0.22
SNED1-205ENST00000405547 CYB561D2O14569 222 aa13.66□□□□□ -0.22
SNED1-205ENST00000405547 PRRG1O14668 218 aa13.66□□□□□ -0.22
SNED1-205ENST00000405547 KLRC4O43908 158 aa13.66□□□□□ -0.22
SNED1-205ENST00000405547 ZNF862O60290 1169 aa13.66□□□□□ -0.22
SNED1-205ENST00000405547 C21orf59P57076 290 aa13.66□□□□□ -0.22
SNED1-205ENST00000405547 ROR2Q01974 943 aaKnown RBP13.66□□□□□ -0.22
SNED1-205ENST00000405547 ZNF177Q13360 481 aaPredicted RBP13.66□□□□□ -0.22
SNED1-205ENST00000405547 LRRC55Q6ZSA7 311 aa13.66□□□□□ -0.22
SNED1-205ENST00000405547 GPRC5AQ8NFJ5 357 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms