RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 SCUBE3Q8IX30 993 aa9.86□□□□□ -0.83
SMC1B-202ENST00000404354 ZNF512Q96ME7 567 aaPredicted RBP9.86□□□□□ -0.83
SMC1B-202ENST00000404354 NLRP4Q96MN2 994 aa9.86□□□□□ -0.83
SMC1B-202ENST00000404354 KLC2Q9H0B6 622 aa9.86□□□□□ -0.83
SMC1B-202ENST00000404354 HERC5Q9UII4 1024 aaKnown RBP9.86□□□□□ -0.83
SMC1B-202ENST00000404354 PHF24Q9UPV7 400 aa9.86□□□□□ -0.83
SMC1B-202ENST00000404354 NFASCO94856 1347 aa9.86□□□□□ -0.83
SMC1B-202ENST00000404354 B4GALT5O43286 388 aa9.86□□□□□ -0.83
SMC1B-202ENST00000404354 STBD1O95210 358 aa9.86□□□□□ -0.83
SMC1B-202ENST00000404354 CRTAMO95727 393 aa9.86□□□□□ -0.83
SMC1B-202ENST00000404354 HSPA4LO95757 839 aa9.86□□□□□ -0.83
SMC1B-202ENST00000404354 C1QAP02745 245 aa9.86□□□□□ -0.83
SMC1B-202ENST00000404354 ALDOAP04075 364 aaKnown RBP9.86□□□□□ -0.83
SMC1B-202ENST00000404354 GLRBP48167 497 aa9.86□□□□□ -0.83
SMC1B-202ENST00000404354 PLD6Q8N2A8 252 aaKnown RBP9.86□□□□□ -0.83
SMC1B-202ENST00000404354 TRAPPC12Q8WVT3 735 aa9.86□□□□□ -0.83
SMC1B-202ENST00000404354 COG4Q9H9E3 785 aa9.86□□□□□ -0.83
SMC1B-202ENST00000404354 C17orf75Q9HAS0 396 aa9.86□□□□□ -0.83
SMC1B-202ENST00000404354 EMCNQ9ULC0 261 aa9.86□□□□□ -0.83
SMC1B-202ENST00000404354 INO80B-WBP1J3KQ70 363 aa9.86□□□□□ -0.83
SMC1B-202ENST00000404354 DNAJA2O60884 412 aa9.86□□□□□ -0.83
SMC1B-202ENST00000404354 TFPTP0C1Z6 253 aa9.86□□□□□ -0.83
SMC1B-202ENST00000404354 SMIM18P0DKX4 95 aa9.86□□□□□ -0.83
SMC1B-202ENST00000404354 COX4I1P13073 169 aa9.86□□□□□ -0.83
SMC1B-202ENST00000404354 TPP2P29144 1249 aaPredicted RBP9.86□□□□□ -0.83
SMC1B-202ENST00000404354 CDH15P55291 814 aa9.86□□□□□ -0.83
SMC1B-202ENST00000404354 CDKL1Q00532 357 aa9.86□□□□□ -0.83
SMC1B-202ENST00000404354 FLOT2Q14254 428 aa9.86□□□□□ -0.83
SMC1B-202ENST00000404354 NOMO1Q15155 1222 aa9.86□□□□□ -0.83
SMC1B-202ENST00000404354 DUOXA2Q1HG44 320 aa9.86□□□□□ -0.83
SMC1B-202ENST00000404354 MBLAC2Q68D91 279 aa9.86□□□□□ -0.83
SMC1B-202ENST00000404354 TRIM67Q6ZTA4 783 aa9.86□□□□□ -0.83
SMC1B-202ENST00000404354 CPNE9Q8IYJ1 553 aa9.86□□□□□ -0.83
SMC1B-202ENST00000404354 SPATA6LQ8N4H0 392 aa9.86□□□□□ -0.83
SMC1B-202ENST00000404354 DGCR14Q96DF8 476 aaKnown RBP9.86□□□□□ -0.83
SMC1B-202ENST00000404354 APOL2Q9BQE5 337 aa9.86□□□□□ -0.83
SMC1B-202ENST00000404354 DCUN1D5Q9BTE7 237 aa9.86□□□□□ -0.83
SMC1B-202ENST00000404354 INO80BQ9C086 356 aaPredicted RBP9.86□□□□□ -0.83
SMC1B-202ENST00000404354 SDCBP2Q9H190 292 aa9.86□□□□□ -0.83
SMC1B-202ENST00000404354 RSAD1Q9HA92 442 aa9.86□□□□□ -0.83
SMC1B-202ENST00000404354 TXNDC16Q9P2K2 825 aa9.86□□□□□ -0.83
SMC1B-202ENST00000404354 GNEQ9Y223 722 aaKnown RBP9.86□□□□□ -0.83
SMC1B-202ENST00000404354 SSX2IPQ9Y2D8 614 aa9.86□□□□□ -0.83
SMC1B-202ENST00000404354 H3BNX3 289 aa9.85□□□□□ -0.83
SMC1B-202ENST00000404354 SNNO75324 88 aaPredicted RBP9.85□□□□□ -0.83
SMC1B-202ENST00000404354 SUPT3HO75486 399 aa9.85□□□□□ -0.83
SMC1B-202ENST00000404354 CHRNGP07510 517 aa9.85□□□□□ -0.83
SMC1B-202ENST00000404354 RALBP11234 206 aa9.85□□□□□ -0.83
SMC1B-202ENST00000404354 MGAT1P26572 445 aa9.85□□□□□ -0.83
SMC1B-202ENST00000404354 ETFBP38117 255 aa9.85□□□□□ -0.83
SMC1B-202ENST00000404354 THOP1P52888 689 aa9.85□□□□□ -0.83
SMC1B-202ENST00000404354 WASHC5Q12768 1159 aa9.85□□□□□ -0.83
SMC1B-202ENST00000404354 SLC10A2Q12908 348 aaPredicted RBP9.85□□□□□ -0.83
SMC1B-202ENST00000404354 KCTD21Q4G0X4 260 aa9.85□□□□□ -0.83
SMC1B-202ENST00000404354 SNRNP48Q6IEG0 339 aaKnown RBP9.85□□□□□ -0.83
SMC1B-202ENST00000404354 SESTD1Q86VW0 696 aa9.85□□□□□ -0.83
SMC1B-202ENST00000404354 FBXW8Q8N3Y1 598 aa9.85□□□□□ -0.83
SMC1B-202ENST00000404354 RNF149Q8NC42 400 aa9.85□□□□□ -0.83
SMC1B-202ENST00000404354 LGMNQ99538 433 aa9.85□□□□□ -0.83
SMC1B-202ENST00000404354 RPAP3Q9H6T3 665 aaPredicted RBP9.85□□□□□ -0.83
SMC1B-202ENST00000404354 CAAP1Q9H8G2 361 aa9.85□□□□□ -0.83
SMC1B-202ENST00000404354 GPAMQ9HCL2 828 aa9.85□□□□□ -0.83
SMC1B-202ENST00000404354 KLF11O14901 512 aa9.85□□□□□ -0.83
SMC1B-202ENST00000404354 GSRP00390 522 aa9.85□□□□□ -0.83
SMC1B-202ENST00000404354 MT-CO1P00395 513 aa9.85□□□□□ -0.83
SMC1B-202ENST00000404354 CXCL8P10145 99 aa9.85□□□□□ -0.83
SMC1B-202ENST00000404354 AOC1P19801 751 aa9.85□□□□□ -0.83
SMC1B-202ENST00000404354 ZNF132P52740 706 aa9.85□□□□□ -0.83
SMC1B-202ENST00000404354 MAPK10P53779 464 aa9.85□□□□□ -0.83
SMC1B-202ENST00000404354 YWHAEP62258 255 aaKnown RBP9.85□□□□□ -0.83
SMC1B-202ENST00000404354 PRAMEP78395 509 aa9.85□□□□□ -0.83
SMC1B-202ENST00000404354 MS4A2Q01362 244 aa9.85□□□□□ -0.83
SMC1B-202ENST00000404354 CAPSQ13938 189 aa9.85□□□□□ -0.83
SMC1B-202ENST00000404354 LAYNQ6UX15 382 aa9.85□□□□□ -0.83
SMC1B-202ENST00000404354 PQLC1Q8N2U9 271 aa9.85□□□□□ -0.83
SMC1B-202ENST00000404354 BHLHE22Q8NFJ8 381 aaPredicted RBP9.85□□□□□ -0.83
SMC1B-202ENST00000404354 PCDH19Q8TAB3 1148 aa9.85□□□□□ -0.83
SMC1B-202ENST00000404354 CATSPER2Q96P56 530 aa9.85□□□□□ -0.83
SMC1B-202ENST00000404354 NUF2Q9BZD4 464 aa9.85□□□□□ -0.83
SMC1B-202ENST00000404354 PAK5Q9P286 719 aa9.85□□□□□ -0.83
SMC1B-202ENST00000404354 FETUBQ9UGM5 382 aa9.85□□□□□ -0.83
SMC1B-202ENST00000404354 MICAL2O94851 1124 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 SEC24DO94855 1032 aaPredicted RBP9.84□□□□□ -0.83
SMC1B-202ENST00000404354 KLHL2O95198 593 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 FUT4P22083 530 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 EIF4BP23588 611 aaKnown RBP9.84□□□□□ -0.83
SMC1B-202ENST00000404354 CRHR1P34998 444 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 MAGEA10P43363 369 aaPredicted RBP9.84□□□□□ -0.83
SMC1B-202ENST00000404354 STT3AP46977 705 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 ADARP55265 1226 aaKnown RBP9.84□□□□□ -0.83
SMC1B-202ENST00000404354 MYBPC1Q00872 1141 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 IRF9Q00978 393 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 PCLAFQ15004 111 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 NAPRTQ6XQN6 538 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 B3GNT6Q6ZMB0 384 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 TSHZ1Q6ZSZ6 1077 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 CMASQ8NFW8 434 aaPredicted RBP9.84□□□□□ -0.83
SMC1B-202ENST00000404354 SIGLEC10Q96LC7 697 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 RNF157Q96PX1 679 aa9.84□□□□□ -0.83
SMC1B-202ENST00000404354 XPNPEP3Q9NQH7 507 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms