RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 ARHGAP25P42331 645 aa16.56■□□□□ 0.24
HMGA1-204ENST00000401473 HARS2P49590 506 aaKnown RBP16.56■□□□□ 0.24
HMGA1-204ENST00000401473 HADHBP55084 474 aaKnown RBP16.56■□□□□ 0.24
HMGA1-204ENST00000401473 PIGHQ14442 188 aaPredicted RBP16.56■□□□□ 0.24
HMGA1-204ENST00000401473 MESDQ14696 234 aa16.56■□□□□ 0.24
HMGA1-204ENST00000401473 PPP2R5DQ14738 602 aa16.56■□□□□ 0.24
HMGA1-204ENST00000401473 TRIM68Q6AZZ1 485 aa16.56■□□□□ 0.24
HMGA1-204ENST00000401473 DDX42Q86XP3 938 aaKnown RBP eCLIP16.56■□□□□ 0.24
HMGA1-204ENST00000401473 NIPA2Q8N8Q9 360 aa16.56■□□□□ 0.24
HMGA1-204ENST00000401473 RNF34Q969K3 372 aa16.56■□□□□ 0.24
HMGA1-204ENST00000401473 P2RY11Q96G91 374 aa16.56■□□□□ 0.24
HMGA1-204ENST00000401473 FAM83CQ9BQN1 747 aa16.56■□□□□ 0.24
HMGA1-204ENST00000401473 TKTL2Q9H0I9 626 aa16.56■□□□□ 0.24
HMGA1-204ENST00000401473 GOLPH3Q9H4A6 298 aa16.56■□□□□ 0.24
HMGA1-204ENST00000401473 IGSF9Q9P2J2 1179 aa16.56■□□□□ 0.24
HMGA1-204ENST00000401473 PAXBP1Q9Y5B6 917 aa16.56■□□□□ 0.24
HMGA1-204ENST00000401473 WNT6Q9Y6F9 365 aa16.56■□□□□ 0.24
HMGA1-204ENST00000401473 OTOL1A6NHN0 477 aaPredicted RBP16.55■□□□□ 0.24
HMGA1-204ENST00000401473 MOCS2O96007 188 aaPredicted RBP16.55■□□□□ 0.24
HMGA1-204ENST00000401473 SCYL2Q6P3W7 929 aa16.55■□□□□ 0.24
HMGA1-204ENST00000401473 CYP4V2Q6ZWL3 525 aaPredicted RBP16.55■□□□□ 0.24
HMGA1-204ENST00000401473 UNC45BQ8IWX7 931 aa16.55■□□□□ 0.24
HMGA1-204ENST00000401473 NXPE3Q969Y0 559 aa16.55■□□□□ 0.24
HMGA1-204ENST00000401473 ARHGEF38Q9NXL2 777 aa16.55■□□□□ 0.24
HMGA1-204ENST00000401473 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.55■□□□□ 0.242e-259■■■■■ 48.7
HMGA1-204ENST00000401473 KIF26AQ9ULI4 1882 aaPredicted RBP16.54■□□□□ 0.24
HMGA1-204ENST00000401473 GOLGA6L7A0A1B0GV03 622 aa16.54■□□□□ 0.24
HMGA1-204ENST00000401473 BUB1BO60566 1050 aaPredicted RBP16.54■□□□□ 0.24
HMGA1-204ENST00000401473 RNF8O76064 485 aa16.54■□□□□ 0.24
HMGA1-204ENST00000401473 PROSCO94903 275 aa16.54■□□□□ 0.24
HMGA1-204ENST00000401473 IL1R2P27930 398 aa16.54■□□□□ 0.24
HMGA1-204ENST00000401473 MIPP30301 263 aa16.54■□□□□ 0.24
HMGA1-204ENST00000401473 TNK2Q07912 1038 aa16.54■□□□□ 0.24
HMGA1-204ENST00000401473 ACAP1Q15027 740 aa16.54■□□□□ 0.24
HMGA1-204ENST00000401473 NUGGCQ68CJ6 796 aa16.54■□□□□ 0.24
HMGA1-204ENST00000401473 NADSYN1Q6IA69 706 aa16.54■□□□□ 0.24
HMGA1-204ENST00000401473 CCDC185Q8N715 623 aa16.54■□□□□ 0.24
HMGA1-204ENST00000401473 TPCN2Q8NHX9 752 aa16.54■□□□□ 0.24
HMGA1-204ENST00000401473 OSCP1Q8WVF1 389 aa16.54■□□□□ 0.24
HMGA1-204ENST00000401473 PEBP4Q96S96 227 aa16.54■□□□□ 0.24
HMGA1-204ENST00000401473 TRMT61BQ9BVS5 477 aaKnown RBP16.54■□□□□ 0.24
HMGA1-204ENST00000401473 PCSK1NQ9UHG2 260 aa16.54■□□□□ 0.24
HMGA1-204ENST00000401473 STOML2Q9UJZ1 356 aa16.54■□□□□ 0.24
HMGA1-204ENST00000401473 HYOU1Q9Y4L1 999 aa16.54■□□□□ 0.24
HMGA1-204ENST00000401473 MACROD2A1Z1Q3 448 aa16.54■□□□□ 0.24
HMGA1-204ENST00000401473 ARNTLO00327 626 aa16.54■□□□□ 0.24
HMGA1-204ENST00000401473 NARSO43776 548 aaKnown RBP16.54■□□□□ 0.24
HMGA1-204ENST00000401473 GDI1P31150 447 aa16.54■□□□□ 0.24
HMGA1-204ENST00000401473 ADRA1BP35368 520 aa16.54■□□□□ 0.24
HMGA1-204ENST00000401473 EML3Q32P44 896 aa16.54■□□□□ 0.24
HMGA1-204ENST00000401473 FAM133BQ5BKY9 247 aaKnown RBP16.54■□□□□ 0.24
HMGA1-204ENST00000401473 BRMS1LQ5PSV4 323 aa16.54■□□□□ 0.24
HMGA1-204ENST00000401473 ARTNQ5T4W7 220 aa16.54■□□□□ 0.24
HMGA1-204ENST00000401473 TXNRD3NBQ6F5E7 133 aa16.54■□□□□ 0.24
HMGA1-204ENST00000401473 CC2D1AQ6P1N0 951 aaPredicted RBP16.54■□□□□ 0.24
HMGA1-204ENST00000401473 ZNF662Q6ZS27 426 aa16.54■□□□□ 0.24
HMGA1-204ENST00000401473 SND1Q7KZF4 910 aaKnown RBP eCLIP16.54■□□□□ 0.24
HMGA1-204ENST00000401473 DEPDC1BQ8WUY9 529 aa16.54■□□□□ 0.24
HMGA1-204ENST00000401473 AZIN2Q96A70 460 aa16.54■□□□□ 0.24
HMGA1-204ENST00000401473 MYEOVQ96EZ4 313 aa16.54■□□□□ 0.24
HMGA1-204ENST00000401473 BTN2A3PQ96KV6 586 aa16.54■□□□□ 0.24
HMGA1-204ENST00000401473 EBF3Q9H4W6 596 aa16.54■□□□□ 0.24
HMGA1-204ENST00000401473 LZTFL1Q9NQ48 299 aa16.54■□□□□ 0.24
HMGA1-204ENST00000401473 DUS2Q9NX74 493 aaKnown RBP16.54■□□□□ 0.24
HMGA1-204ENST00000401473 MUTYHQ9UIF7 546 aa16.54■□□□□ 0.24
HMGA1-204ENST00000401473 TMEM110-MUSTN1A8MSY1 372 aa16.53■□□□□ 0.24
HMGA1-204ENST00000401473 TRDMT1O14717 391 aaKnown RBP16.53■□□□□ 0.24
HMGA1-204ENST00000401473 ACSL4O60488 711 aa16.53■□□□□ 0.24
HMGA1-204ENST00000401473 PAGE1O75459 146 aa16.53■□□□□ 0.24
HMGA1-204ENST00000401473 SLC2A3P11169 496 aa16.53■□□□□ 0.24
HMGA1-204ENST00000401473 SLC6A4P31645 630 aa16.53■□□□□ 0.24
HMGA1-204ENST00000401473 PCK1P35558 622 aa16.53■□□□□ 0.24
HMGA1-204ENST00000401473 GGCXP38435 758 aa16.53■□□□□ 0.24
HMGA1-204ENST00000401473 ADGRF1Q5T601 910 aa16.53■□□□□ 0.24
HMGA1-204ENST00000401473 PIK3R6Q5UE93 754 aa16.53■□□□□ 0.24
HMGA1-204ENST00000401473 REXO1L1PQ8IX06 675 aa16.53■□□□□ 0.24
HMGA1-204ENST00000401473 DCLK3Q9C098 648 aa16.53■□□□□ 0.24
HMGA1-204ENST00000401473 HPS4Q9NQG7 708 aa16.53■□□□□ 0.24
HMGA1-204ENST00000401473 GTSE1Q9NYZ3 720 aa16.53■□□□□ 0.24
HMGA1-204ENST00000401473 LSM7Q9UK45 103 aaKnown RBP16.53■□□□□ 0.24
HMGA1-204ENST00000401473 USP18Q9UMW8 372 aa16.53■□□□□ 0.24
HMGA1-204ENST00000401473 GUCA1BQ9UMX6 200 aa16.53■□□□□ 0.24
HMGA1-204ENST00000401473 SNX10Q9Y5X0 201 aa16.53■□□□□ 0.24
HMGA1-204ENST00000401473 ALG6Q9Y672 507 aa16.53■□□□□ 0.24
HMGA1-204ENST00000401473 CHADO15335 359 aa16.52■□□□□ 0.24
HMGA1-204ENST00000401473 APOEP02649 317 aa16.52■□□□□ 0.24
HMGA1-204ENST00000401473 ARSAP15289 507 aa16.52■□□□□ 0.24
HMGA1-204ENST00000401473 VCPP55072 806 aaKnown RBP16.52■□□□□ 0.24
HMGA1-204ENST00000401473 MLLT6P55198 1093 aaPredicted RBP16.52■□□□□ 0.24
HMGA1-204ENST00000401473 NAP1L1P55209 391 aaKnown RBP16.52■□□□□ 0.24
HMGA1-204ENST00000401473 TAS2R40P59535 323 aa16.52■□□□□ 0.24
HMGA1-204ENST00000401473 MS4A13Q5J8X5 152 aa16.52■□□□□ 0.24
HMGA1-204ENST00000401473 IER5LQ5T953 404 aa16.52■□□□□ 0.24
HMGA1-204ENST00000401473 RFWD3Q6PCD5 774 aa16.52■□□□□ 0.24
HMGA1-204ENST00000401473 RHBDF2Q6PJF5 856 aa16.52■□□□□ 0.24
HMGA1-204ENST00000401473 TMEM25Q86YD3 366 aa16.52■□□□□ 0.24
HMGA1-204ENST00000401473 FAM217AQ8IXS0 508 aa16.52■□□□□ 0.24
HMGA1-204ENST00000401473 KIAA1958Q8N8K9 716 aa16.52■□□□□ 0.24
HMGA1-204ENST00000401473 SIK2Q9H0K1 926 aa16.52■□□□□ 0.24
HMGA1-204ENST00000401473 THG1LQ9NWX6 298 aaKnown RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms