RNA–Protein interactions for RNA: ENST00000400556.7

PPP4R1-203, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-203ENST00000400556 NEMP1O14524 444 aa10.9□□□□□ -0.66
PPP4R1-203ENST00000400556 NDC80O14777 642 aa10.9□□□□□ -0.66
PPP4R1-203ENST00000400556 DCXO43602 365 aa10.9□□□□□ -0.66
PPP4R1-203ENST00000400556 CCDC130P13994 396 aa10.9□□□□□ -0.66
PPP4R1-203ENST00000400556 ICAM3P32942 547 aa10.9□□□□□ -0.66
PPP4R1-203ENST00000400556 CCR10P46092 362 aa10.9□□□□□ -0.66
PPP4R1-203ENST00000400556 SLC1A6P48664 564 aa10.9□□□□□ -0.66
PPP4R1-203ENST00000400556 FAM47CQ5HY64 1035 aa10.9□□□□□ -0.66
PPP4R1-203ENST00000400556 ILDR2Q71H61 639 aa10.9□□□□□ -0.66
PPP4R1-203ENST00000400556 MAVSQ7Z434 540 aa10.9□□□□□ -0.66
PPP4R1-203ENST00000400556 OR6B3Q8NGW1 331 aa10.9□□□□□ -0.66
PPP4R1-203ENST00000400556 FAM149B1Q96BN6 582 aa10.9□□□□□ -0.66
PPP4R1-203ENST00000400556 FGD4Q96M96 766 aa10.9□□□□□ -0.66
PPP4R1-203ENST00000400556 C7orf26Q96N11 449 aa10.9□□□□□ -0.66
PPP4R1-203ENST00000400556 GBP5Q96PP8 586 aa10.9□□□□□ -0.66
PPP4R1-203ENST00000400556 TUBB6Q9BUF5 446 aa10.9□□□□□ -0.66
PPP4R1-203ENST00000400556 TMEM216Q9P0N5 145 aa10.9□□□□□ -0.66
PPP4R1-203ENST00000400556 EMCNQ9ULC0 261 aa10.9□□□□□ -0.66
PPP4R1-203ENST00000400556 NME7Q9Y5B8 376 aa10.9□□□□□ -0.66
PPP4R1-203ENST00000400556 RLFQ13129 1914 aa10.9□□□□□ -0.66
PPP4R1-203ENST00000400556 A0A088AWK7 358 aa10.9□□□□□ -0.66
PPP4R1-203ENST00000400556 DGKIO75912 1065 aa10.9□□□□□ -0.66
PPP4R1-203ENST00000400556 LYNP07948 512 aa10.9□□□□□ -0.66
PPP4R1-203ENST00000400556 VDRP11473 427 aa10.9□□□□□ -0.66
PPP4R1-203ENST00000400556 ARF4P18085 180 aaPredicted RBP10.9□□□□□ -0.66
PPP4R1-203ENST00000400556 OAZ1P54368 228 aa10.9□□□□□ -0.66
PPP4R1-203ENST00000400556 ASPHQ12797 758 aa10.9□□□□□ -0.66
PPP4R1-203ENST00000400556 PDE1CQ14123 709 aaPredicted RBP10.9□□□□□ -0.66
PPP4R1-203ENST00000400556 TMEM132DQ14C87 1099 aa10.9□□□□□ -0.66
PPP4R1-203ENST00000400556 HEATR6Q6AI08 1181 aaKnown RBP10.9□□□□□ -0.66
PPP4R1-203ENST00000400556 KLRG1Q96E93 195 aa10.9□□□□□ -0.66
PPP4R1-203ENST00000400556 FZD8Q9H461 694 aa10.9□□□□□ -0.66
PPP4R1-203ENST00000400556 A6NJR5 290 aa10.9□□□□□ -0.66
PPP4R1-203ENST00000400556 CREB3O43889 395 aa10.9□□□□□ -0.66
PPP4R1-203ENST00000400556 OPHN1O60890 802 aa10.9□□□□□ -0.66
PPP4R1-203ENST00000400556 ENDOD1O94919 500 aa10.9□□□□□ -0.66
PPP4R1-203ENST00000400556 ZNF286BP0CG31 522 aa10.9□□□□□ -0.66
PPP4R1-203ENST00000400556 VAV1P15498 845 aa10.9□□□□□ -0.66
PPP4R1-203ENST00000400556 PRKCHP24723 683 aa10.9□□□□□ -0.66
PPP4R1-203ENST00000400556 PEX2P28328 305 aa10.9□□□□□ -0.66
PPP4R1-203ENST00000400556 CUL3Q13618 768 aa10.9□□□□□ -0.66
PPP4R1-203ENST00000400556 HIC1Q14526 733 aa10.9□□□□□ -0.66
PPP4R1-203ENST00000400556 SURF1Q15526 300 aa10.9□□□□□ -0.66
PPP4R1-203ENST00000400556 MOB2Q70IA6 237 aa10.9□□□□□ -0.66
PPP4R1-203ENST00000400556 RASSF3Q86WH2 238 aa10.9□□□□□ -0.66
PPP4R1-203ENST00000400556 KHSRPQ92945 711 aaKnown RBP eCLIP10.9□□□□□ -0.661e-7■■■□□ 17.8
PPP4R1-203ENST00000400556 NT5C1AQ9BXI3 368 aa10.9□□□□□ -0.66
PPP4R1-203ENST00000400556 IFT122Q9HBG6 1241 aa10.9□□□□□ -0.66
PPP4R1-203ENST00000400556 DPP3Q9NY33 737 aa10.9□□□□□ -0.66
PPP4R1-203ENST00000400556 ZNF212Q9UDV6 495 aa10.9□□□□□ -0.66
PPP4R1-203ENST00000400556 PROZP22891 400 aa10.9□□□□□ -0.67
PPP4R1-203ENST00000400556 ACTR3P61158 418 aa10.9□□□□□ -0.67
PPP4R1-203ENST00000400556 AP2B1P63010 937 aa10.9□□□□□ -0.67
PPP4R1-203ENST00000400556 DSG1Q02413 1049 aa10.9□□□□□ -0.67
PPP4R1-203ENST00000400556 SOWAHAQ2M3V2 549 aa10.9□□□□□ -0.67
PPP4R1-203ENST00000400556 SFT2D3Q587I9 215 aa10.9□□□□□ -0.67
PPP4R1-203ENST00000400556 TEDDM1Q5T9Z0 273 aa10.9□□□□□ -0.67
PPP4R1-203ENST00000400556 OLFML1Q6UWY5 402 aa10.9□□□□□ -0.67
PPP4R1-203ENST00000400556 WDR75Q8IWA0 830 aaKnown RBP10.9□□□□□ -0.67
PPP4R1-203ENST00000400556 DEFB107AQ8IZN7 70 aa10.9□□□□□ -0.67
PPP4R1-203ENST00000400556 NME8Q8N427 588 aa10.9□□□□□ -0.67
PPP4R1-203ENST00000400556 ANKRD27Q96NW4 1050 aa10.9□□□□□ -0.67
PPP4R1-203ENST00000400556 ECSITQ9BQ95 431 aa10.9□□□□□ -0.67
PPP4R1-203ENST00000400556 XPNPEP3Q9NQH7 507 aa10.9□□□□□ -0.67
PPP4R1-203ENST00000400556 ANGPTL2Q9UKU9 493 aa10.9□□□□□ -0.67
PPP4R1-203ENST00000400556 BARX2Q9UMQ3 279 aaPredicted RBP10.9□□□□□ -0.67
PPP4R1-203ENST00000400556 RGPD3A6NKT7 1758 aaPredicted RBP10.89□□□□□ -0.67
PPP4R1-203ENST00000400556 RGPD4Q7Z3J3 1758 aa10.89□□□□□ -0.67
PPP4R1-203ENST00000400556 GSRP00390 522 aa10.89□□□□□ -0.67
PPP4R1-203ENST00000400556 TXNP10599 105 aaKnown RBP10.89□□□□□ -0.67
PPP4R1-203ENST00000400556 INSRRP14616 1297 aa10.89□□□□□ -0.67
PPP4R1-203ENST00000400556 INHBEP58166 350 aa10.89□□□□□ -0.67
PPP4R1-203ENST00000400556 SPDYAQ5MJ70 313 aa10.89□□□□□ -0.67
PPP4R1-203ENST00000400556 FAM219BQ5XKK7 198 aa10.89□□□□□ -0.67
PPP4R1-203ENST00000400556 DNERQ8NFT8 737 aa10.89□□□□□ -0.67
PPP4R1-203ENST00000400556 PIWIL2Q8TC59 973 aaKnown RBP10.89□□□□□ -0.67
PPP4R1-203ENST00000400556 NLRP7Q8WX94 980 aa10.89□□□□□ -0.67
PPP4R1-203ENST00000400556 GATA6Q92908 595 aa10.89□□□□□ -0.67
PPP4R1-203ENST00000400556 C18orf25Q96B23 403 aaPredicted RBP10.89□□□□□ -0.67
PPP4R1-203ENST00000400556 FRMD8P1Q9BZ68 369 aaPredicted RBP10.89□□□□□ -0.67
PPP4R1-203ENST00000400556 TRIM4Q9C037 500 aa10.89□□□□□ -0.67
PPP4R1-203ENST00000400556 GBA2Q9HCG7 927 aaPredicted RBP10.89□□□□□ -0.67
PPP4R1-203ENST00000400556 SOX13Q9UN79 622 aa10.89□□□□□ -0.67
PPP4R1-203ENST00000400556 AP4E1Q9UPM8 1137 aa10.89□□□□□ -0.67
PPP4R1-203ENST00000400556 APOBEC2Q9Y235 224 aaKnown RBP10.89□□□□□ -0.67
PPP4R1-203ENST00000400556 LCTP09848 1927 aa10.89□□□□□ -0.67
PPP4R1-203ENST00000400556 SDR42E2A6NKP2 422 aa10.89□□□□□ -0.67
PPP4R1-203ENST00000400556 SIN3BO75182 1162 aa10.89□□□□□ -0.67
PPP4R1-203ENST00000400556 SPAG6O75602 509 aa10.89□□□□□ -0.67
PPP4R1-203ENST00000400556 FGF3P11487 239 aaPredicted RBP10.89□□□□□ -0.67
PPP4R1-203ENST00000400556 TYK2P29597 1187 aa10.89□□□□□ -0.67
PPP4R1-203ENST00000400556 ZRSR2Q15696 482 aaKnown RBP10.89□□□□□ -0.67
PPP4R1-203ENST00000400556 ZNF618Q5T7W0 954 aa10.89□□□□□ -0.67
PPP4R1-203ENST00000400556 CTU1Q7Z7A3 348 aaKnown RBP10.89□□□□□ -0.67
PPP4R1-203ENST00000400556 PLD6Q8N2A8 252 aaKnown RBP10.89□□□□□ -0.67
PPP4R1-203ENST00000400556 CXorf38Q8TB03 319 aa10.89□□□□□ -0.67
PPP4R1-203ENST00000400556 OTUD5Q96G74 571 aa10.89□□□□□ -0.67
PPP4R1-203ENST00000400556 MARK4Q96L34 752 aa10.89□□□□□ -0.67
PPP4R1-203ENST00000400556 SPATC1LQ9H0A9 340 aa10.89□□□□□ -0.67
PPP4R1-203ENST00000400556 TXNRD2Q9NNW7 524 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms