RNA–Protein interactions for RNA: ENST00000400227.7

CSNK2A1-204, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK2A1, Length 1,499 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-204ENST00000400227 LSP1P33241 339 aa7.18□□□□□ -1.26
CSNK2A1-204ENST00000400227 QARSP47897 775 aaKnown RBP7.18□□□□□ -1.26
CSNK2A1-204ENST00000400227 MLLT6P55198 1093 aaPredicted RBP7.18□□□□□ -1.26
CSNK2A1-204ENST00000400227 TMEM132BQ14DG7 1078 aa7.18□□□□□ -1.26
CSNK2A1-204ENST00000400227 TNIP1Q15025 636 aa7.18□□□□□ -1.26
CSNK2A1-204ENST00000400227 PTGISQ16647 500 aa7.18□□□□□ -1.26
CSNK2A1-204ENST00000400227 UGCGQ16739 394 aa7.18□□□□□ -1.26
CSNK2A1-204ENST00000400227 CEP85LQ5SZL2 805 aa7.18□□□□□ -1.26
CSNK2A1-204ENST00000400227 PHF19Q5T6S3 580 aa7.18□□□□□ -1.26
CSNK2A1-204ENST00000400227 PRAMEF18Q5VWM3 479 aa7.18□□□□□ -1.26
CSNK2A1-204ENST00000400227 DUPD1Q68J44 220 aa7.18□□□□□ -1.26
CSNK2A1-204ENST00000400227 MIGA2Q7L4E1 593 aa7.18□□□□□ -1.26
CSNK2A1-204ENST00000400227 RHOT2Q8IXI1 618 aa7.18□□□□□ -1.26
CSNK2A1-204ENST00000400227 FAM71AQ8IYT1 594 aa7.18□□□□□ -1.26
CSNK2A1-204ENST00000400227 RTKN2Q8IZC4 609 aa7.18□□□□□ -1.26
CSNK2A1-204ENST00000400227 SAMD3Q8N6K7 520 aa7.18□□□□□ -1.26
CSNK2A1-204ENST00000400227 XXYLT1Q8NBI6 393 aa7.18□□□□□ -1.26
CSNK2A1-204ENST00000400227 ASB15Q8WXK1 588 aa7.18□□□□□ -1.26
CSNK2A1-204ENST00000400227 KCNC2Q96PR1 638 aa7.18□□□□□ -1.26
CSNK2A1-204ENST00000400227 PCDHB18PQ96TA0 734 aa7.18□□□□□ -1.26
CSNK2A1-204ENST00000400227 SPATA25Q9BR10 227 aa7.18□□□□□ -1.26
CSNK2A1-204ENST00000400227 CBWD1Q9BRT8 395 aa7.18□□□□□ -1.26
CSNK2A1-204ENST00000400227 TRIM51Q9BSJ1 452 aa7.18□□□□□ -1.26
CSNK2A1-204ENST00000400227 PAGR1Q9BTK6 254 aa7.18□□□□□ -1.26
CSNK2A1-204ENST00000400227 KRTAP4-2Q9BYR5 136 aa7.18□□□□□ -1.26
CSNK2A1-204ENST00000400227 FAM107BQ9H098 131 aa7.18□□□□□ -1.26
CSNK2A1-204ENST00000400227 CARD9Q9H257 536 aa7.18□□□□□ -1.26
CSNK2A1-204ENST00000400227 VEZTQ9HBM0 779 aa7.18□□□□□ -1.26
CSNK2A1-204ENST00000400227 UBE2TQ9NPD8 197 aaPredicted RBP7.18□□□□□ -1.26
CSNK2A1-204ENST00000400227 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.18□□□□□ -1.26
CSNK2A1-204ENST00000400227 LARSQ9P2J5 1176 aaKnown RBP7.18□□□□□ -1.26
CSNK2A1-204ENST00000400227 NOCTQ9UK39 431 aaKnown RBP7.18□□□□□ -1.26
CSNK2A1-204ENST00000400227 ALG6Q9Y672 507 aa7.18□□□□□ -1.26
CSNK2A1-204ENST00000400227 SIP14410 1827 aa7.18□□□□□ -1.26
CSNK2A1-204ENST00000400227 ASTN2O75129 1339 aaPredicted RBP7.18□□□□□ -1.26
CSNK2A1-204ENST00000400227 ATXN2Q99700 1313 aaKnown RBP7.18□□□□□ -1.26
CSNK2A1-204ENST00000400227 DOCK1Q14185 1865 aa7.18□□□□□ -1.26
CSNK2A1-204ENST00000400227 A0A087WUV0 522 aaPredicted RBP7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 ANKRD65E5RJM6 399 aa7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 EBAG9O00559 213 aa7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 WDR46O15213 610 aaKnown RBP7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 RTN2O75298 545 aa7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 SGPL1O95470 568 aa7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 FTLP02792 175 aaPredicted RBP7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 ADRB2P07550 413 aa7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 ASNSP08243 561 aa7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 BMP7P18075 431 aa7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 VCAM1P19320 739 aa7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 MDH1P40925 334 aaKnown RBP7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 GLRBP48167 497 aa7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 GCLMP48507 274 aa7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 KCNC1P48547 511 aa7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 PEX5P50542 639 aa7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 DRG2P55039 364 aaKnown RBP7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 GPC5P78333 572 aa7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 DSG1Q02413 1049 aa7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 BIRC3Q13489 604 aa7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 CLUL1Q15846 466 aa7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 SPDYCQ5MJ68 293 aa7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 CATSPEREQ5SY80 951 aa7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 MAEAQ7L5Y9 396 aa7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 HAUS6Q7Z4H7 955 aa7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 C4orf19Q8IY42 314 aa7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 EFCAB13Q8IY85 973 aa7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 RPUSD2Q8IZ73 545 aaKnown RBP7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 PRPF38AQ8NAV1 312 aaKnown RBP7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 AGBL3Q8NEM8 1001 aa7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 OR2W6PQ8NHA6 318 aa7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 ADAMTS17Q8TE56 1095 aa7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 ZCCHC14Q8WYQ9 949 aaKnown RBP7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 SEMA4DQ92854 862 aa7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 KAT5Q92993 513 aa7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 RPS6KC1Q96S38 1066 aa7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 NAP1L3Q99457 506 aaPredicted RBP7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 ZSWIM1Q9BR11 485 aa7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 ZNF341Q9BYN7 854 aa7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 TMEM117Q9H0C3 514 aa7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 RABEP2Q9H5N1 569 aa7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 SLC38A10Q9HBR0 1119 aa7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 ERVK-5Q9HDB9 667 aa7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 ZNF277Q9NRM2 450 aaPredicted RBP7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 ANKEF1Q9NU02 776 aa7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 TBC1D22BQ9NU19 505 aa7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 ZDHHC18Q9NUE0 388 aa7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 MAP3K20Q9NYL2 800 aaKnown RBP7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 MAPRE3Q9UPY8 281 aa7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 FAM169AQ9Y6X4 670 aa7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 MYH9P35579 1960 aaKnown RBP7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 PHIPQ8WWQ0 1821 aa7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 LCTP09848 1927 aa7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 TMEM150BA6NC51 233 aa7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 MIF4GDA9UHW6 222 aaKnown RBP7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 ANKRD63C9JTQ0 380 aa7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 SLC16A4O15374 487 aa7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 PHF2O75151 1096 aa7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 FBXO21O94952 628 aa7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 GGPS1O95749 300 aa7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 IL18BPO95998 194 aa7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 CCNE2O96020 404 aa7.17□□□□□ -1.26
CSNK2A1-204ENST00000400227 CYP1A2P05177 515 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms