RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 TRIP10Q15642 601 aa14.63□□□□□ -0.07
PCDHA11-201ENST00000398640 CACHD1Q5VU97 1274 aa14.63□□□□□ -0.07
PCDHA11-201ENST00000398640 GAD1Q99259 594 aa14.63□□□□□ -0.07
PCDHA11-201ENST00000398640 BTBD7Q9P203 1132 aa14.63□□□□□ -0.07
PCDHA11-201ENST00000398640 XPO1O14980 1071 aaKnown RBP14.63□□□□□ -0.07
PCDHA11-201ENST00000398640 SLITRK3O94933 977 aa14.63□□□□□ -0.07
PCDHA11-201ENST00000398640 S100A5P33763 92 aa14.63□□□□□ -0.07
PCDHA11-201ENST00000398640 GUCA1AP43080 201 aaPredicted RBP14.63□□□□□ -0.07
PCDHA11-201ENST00000398640 NCKAP1LP55160 1127 aa14.63□□□□□ -0.07
PCDHA11-201ENST00000398640 TPCN2Q8NHX9 752 aa14.63□□□□□ -0.07
PCDHA11-201ENST00000398640 RIN3Q8TB24 985 aa14.63□□□□□ -0.07
PCDHA11-201ENST00000398640 RNF186Q9NXI6 227 aa14.63□□□□□ -0.07
PCDHA11-201ENST00000398640 AKAP7Q9P0M2 348 aaPredicted RBP14.63□□□□□ -0.07
PCDHA11-201ENST00000398640 MTO1Q9Y2Z2 717 aaKnown RBP14.63□□□□□ -0.07
PCDHA11-201ENST00000398640 AAR2Q9Y312 384 aaKnown RBP14.63□□□□□ -0.07
PCDHA11-201ENST00000398640 SF3B1O75533 1304 aaKnown RBP eCLIP14.62□□□□□ -0.07
PCDHA11-201ENST00000398640 LOC102724159A0A0B4J2E5 919 aa14.62□□□□□ -0.07
PCDHA11-201ENST00000398640 C16orf96A6NNT2 1141 aa14.62□□□□□ -0.07
PCDHA11-201ENST00000398640 FBXO21O94952 628 aa14.62□□□□□ -0.07
PCDHA11-201ENST00000398640 SCNN1GP51170 649 aa14.62□□□□□ -0.07
PCDHA11-201ENST00000398640 PWP2Q15269 919 aaKnown RBP14.62□□□□□ -0.07
PCDHA11-201ENST00000398640 POM121L1PQ3SYA9 428 aa14.62□□□□□ -0.07
PCDHA11-201ENST00000398640 MTSS1LQ765P7 747 aa14.62□□□□□ -0.07
PCDHA11-201ENST00000398640 LRRC8DQ7L1W4 858 aa14.62□□□□□ -0.07
PCDHA11-201ENST00000398640 OTOP2Q7RTS6 562 aa14.62□□□□□ -0.07
PCDHA11-201ENST00000398640 SGSM3Q96HU1 749 aa14.62□□□□□ -0.07
PCDHA11-201ENST00000398640 USP20Q9Y2K6 914 aa14.62□□□□□ -0.07
PCDHA11-201ENST00000398640 ZNF711Q9Y462 761 aa14.62□□□□□ -0.07
PCDHA11-201ENST00000398640 AFDNP55196 1824 aaKnown RBP14.62□□□□□ -0.07
PCDHA11-201ENST00000398640 RPS7P62081 194 aaKnown RBP14.62□□□□□ -0.07
PCDHA11-201ENST00000398640 LRP10Q7Z4F1 713 aa14.62□□□□□ -0.07
PCDHA11-201ENST00000398640 FAR2Q96K12 515 aa14.62□□□□□ -0.07
PCDHA11-201ENST00000398640 RBBP8Q99708 897 aa14.62□□□□□ -0.07
PCDHA11-201ENST00000398640 ST3GAL5Q9UNP4 418 aa14.62□□□□□ -0.07
PCDHA11-201ENST00000398640 CTSEP14091 401 aa14.62□□□□□ -0.07
PCDHA11-201ENST00000398640 TFE3P19532 575 aaPredicted RBP14.62□□□□□ -0.07
PCDHA11-201ENST00000398640 PRKAA1Q13131 559 aa14.62□□□□□ -0.07
PCDHA11-201ENST00000398640 EMC1Q8N766 993 aa14.62□□□□□ -0.07
PCDHA11-201ENST00000398640 FBXO36Q8NEA4 188 aa14.62□□□□□ -0.07
PCDHA11-201ENST00000398640 TNIP2Q8NFZ5 429 aa14.62□□□□□ -0.07
PCDHA11-201ENST00000398640 SEC16BQ96JE7 1060 aa14.62□□□□□ -0.07
PCDHA11-201ENST00000398640 FBXO44Q9H4M3 255 aa14.62□□□□□ -0.07
PCDHA11-201ENST00000398640 VPS9D1Q9Y2B5 631 aa14.62□□□□□ -0.07
PCDHA11-201ENST00000398640 TBX4P57082 545 aa14.62□□□□□ -0.07
PCDHA11-201ENST00000398640 MRPS15P82914 257 aaKnown RBP14.62□□□□□ -0.07
PCDHA11-201ENST00000398640 P3H2Q8IVL5 708 aa14.62□□□□□ -0.07
PCDHA11-201ENST00000398640 SERAC1Q96JX3 654 aa14.62□□□□□ -0.07
PCDHA11-201ENST00000398640 OMDQ99983 421 aa14.62□□□□□ -0.07
PCDHA11-201ENST00000398640 ZFYVE1Q9HBF4 777 aa14.62□□□□□ -0.07
PCDHA11-201ENST00000398640 ZMYM2Q9UBW7 1377 aa14.62□□□□□ -0.07
PCDHA11-201ENST00000398640 RTN3O95197 1032 aaPredicted RBP14.62□□□□□ -0.07
PCDHA11-201ENST00000398640 CYP24A1Q07973 514 aa14.62□□□□□ -0.07
PCDHA11-201ENST00000398640 CYP51A1Q16850 503 aa14.62□□□□□ -0.07
PCDHA11-201ENST00000398640 CAMKK1Q8N5S9 505 aa14.62□□□□□ -0.07
PCDHA11-201ENST00000398640 TEX9Q8N6V9 391 aa14.62□□□□□ -0.07
PCDHA11-201ENST00000398640 TMEM176AQ96HP8 235 aa14.62□□□□□ -0.07
PCDHA11-201ENST00000398640 ADGRE3Q9BY15 652 aa14.62□□□□□ -0.07
PCDHA11-201ENST00000398640 PPCSQ9HAB8 311 aa14.62□□□□□ -0.07
PCDHA11-201ENST00000398640 CYP3A43Q9HB55 503 aa14.62□□□□□ -0.07
PCDHA11-201ENST00000398640 DUSP10Q9Y6W6 482 aa14.62□□□□□ -0.07
PCDHA11-201ENST00000398640 KPNA3O00505 521 aaPredicted RBP14.61□□□□□ -0.07
PCDHA11-201ENST00000398640 LAG3P18627 525 aa14.61□□□□□ -0.07
PCDHA11-201ENST00000398640 PTAR1Q7Z6K3 402 aaPredicted RBP14.61□□□□□ -0.07
PCDHA11-201ENST00000398640 AMIGO3Q86WK7 504 aa14.61□□□□□ -0.07
PCDHA11-201ENST00000398640 ARID3BQ8IVW6 561 aaPredicted RBP14.61□□□□□ -0.07
PCDHA11-201ENST00000398640 B3GALNT2Q8NCR0 500 aa14.61□□□□□ -0.07
PCDHA11-201ENST00000398640 EPS8L3Q8TE67 593 aaKnown RBP14.61□□□□□ -0.07
PCDHA11-201ENST00000398640 CEP41Q9BYV8 373 aa14.61□□□□□ -0.07
PCDHA11-201ENST00000398640 COL1A2P08123 1366 aa14.61□□□□□ -0.07
PCDHA11-201ENST00000398640 EIF4BP23588 611 aaKnown RBP14.61□□□□□ -0.07
PCDHA11-201ENST00000398640 FPGSQ05932 587 aa14.61□□□□□ -0.07
PCDHA11-201ENST00000398640 DNAJC3Q13217 504 aa14.61□□□□□ -0.07
PCDHA11-201ENST00000398640 AASDHQ4L235 1098 aaPredicted RBP14.61□□□□□ -0.07
PCDHA11-201ENST00000398640 CEP68Q76N32 757 aa14.61□□□□□ -0.07
PCDHA11-201ENST00000398640 ZNF720Q7Z2F6 126 aa14.61□□□□□ -0.07
PCDHA11-201ENST00000398640 SLC47A2Q86VL8 602 aa14.61□□□□□ -0.07
PCDHA11-201ENST00000398640 SLC13A5Q86YT5 568 aaPredicted RBP14.61□□□□□ -0.07
PCDHA11-201ENST00000398640 MMGT1Q8N4V1 131 aa14.61□□□□□ -0.07
PCDHA11-201ENST00000398640 MAF1Q9H063 256 aa14.61□□□□□ -0.07
PCDHA11-201ENST00000398640 GNG14A0A1W2PPG7 69 aa14.61□□□□□ -0.07
PCDHA11-201ENST00000398640 TMEM150BA6NC51 233 aa14.61□□□□□ -0.07
PCDHA11-201ENST00000398640 TRPC5OSA6NMA1 111 aa14.61□□□□□ -0.07
PCDHA11-201ENST00000398640 PSTPIP1O43586 416 aa14.61□□□□□ -0.07
PCDHA11-201ENST00000398640 ALDH9A1P49189 494 aa14.61□□□□□ -0.07
PCDHA11-201ENST00000398640 C4orf22Q6V702 233 aa14.61□□□□□ -0.07
PCDHA11-201ENST00000398640 KIRREL3Q8IZU9 778 aa14.61□□□□□ -0.07
PCDHA11-201ENST00000398640 CORO1BQ9BR76 489 aa14.61□□□□□ -0.07
PCDHA11-201ENST00000398640 ASB7Q9H672 318 aa14.61□□□□□ -0.07
PCDHA11-201ENST00000398640 CAB39Q9Y376 341 aaPredicted RBP14.61□□□□□ -0.07
PCDHA11-201ENST00000398640 ZW10O43264 779 aa14.61□□□□□ -0.07
PCDHA11-201ENST00000398640 RECQL4O94761 1208 aa14.61□□□□□ -0.07
PCDHA11-201ENST00000398640 CYP11B1P15538 503 aa14.61□□□□□ -0.07
PCDHA11-201ENST00000398640 USP41Q3LFD5 358 aa14.61□□□□□ -0.07
PCDHA11-201ENST00000398640 ZPBP2Q6X784 338 aa14.61□□□□□ -0.07
PCDHA11-201ENST00000398640 EFL1Q7Z2Z2 1120 aaKnown RBP14.61□□□□□ -0.07
PCDHA11-201ENST00000398640 LGI2Q8N0V4 545 aa14.61□□□□□ -0.07
PCDHA11-201ENST00000398640 ZNF333Q96JL9 665 aa14.61□□□□□ -0.07
PCDHA11-201ENST00000398640 VIPAS39Q9H9C1 493 aa14.61□□□□□ -0.07
PCDHA11-201ENST00000398640 SCN3BQ9NY72 215 aa14.61□□□□□ -0.07
PCDHA11-201ENST00000398640 AP4E1Q9UPM8 1137 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms