RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 BATF3Q9NR55 127 aa14.61□□□□□ -0.07
PCDHGA11-201ENST00000398587 VPS28Q9UK41 221 aa14.61□□□□□ -0.07
PCDHGA11-201ENST00000398587 SYCE1LA8MT33 242 aa14.61□□□□□ -0.07
PCDHGA11-201ENST00000398587 M0R2N6 131 aa14.61□□□□□ -0.07
PCDHGA11-201ENST00000398587 SKAP2O75563 359 aaPredicted RBP14.61□□□□□ -0.07
PCDHGA11-201ENST00000398587 USP17L7P0C7H9 530 aa14.61□□□□□ -0.07
PCDHGA11-201ENST00000398587 CALB2P22676 271 aa14.61□□□□□ -0.07
PCDHGA11-201ENST00000398587 EEF1DP29692 281 aaKnown RBP14.61□□□□□ -0.07
PCDHGA11-201ENST00000398587 CD151P48509 253 aa14.61□□□□□ -0.07
PCDHGA11-201ENST00000398587 FOXD4Q12950 439 aaPredicted RBP14.61□□□□□ -0.07
PCDHGA11-201ENST00000398587 DUSP28Q4G0W2 176 aa14.61□□□□□ -0.07
PCDHGA11-201ENST00000398587 PRAMEF19Q5SWL8 479 aa14.61□□□□□ -0.07
PCDHGA11-201ENST00000398587 TMCO4Q5TGY1 634 aa14.61□□□□□ -0.07
PCDHGA11-201ENST00000398587 MTDHQ86UE4 582 aaKnown RBP14.61□□□□□ -0.07
PCDHGA11-201ENST00000398587 PCDHB18PQ96TA0 734 aa14.61□□□□□ -0.07
PCDHGA11-201ENST00000398587 SNRNP25Q9BV90 132 aaKnown RBP14.61□□□□□ -0.07
PCDHGA11-201ENST00000398587 TMEM120AQ9BXJ8 343 aa14.61□□□□□ -0.07
PCDHGA11-201ENST00000398587 MRPL9Q9BYD2 267 aaKnown RBP14.61□□□□□ -0.07
PCDHGA11-201ENST00000398587 SAE1Q9UBE0 346 aaPredicted RBP14.61□□□□□ -0.07
PCDHGA11-201ENST00000398587 ADGRA2Q96PE1 1338 aa14.6□□□□□ -0.07
PCDHGA11-201ENST00000398587 ARHGAP10A1A4S6 786 aa14.6□□□□□ -0.07
PCDHGA11-201ENST00000398587 ERI2A8K979 691 aaKnown RBP14.6□□□□□ -0.07
PCDHGA11-201ENST00000398587 CHADO15335 359 aa14.6□□□□□ -0.07
PCDHGA11-201ENST00000398587 DGKIO75912 1065 aa14.6□□□□□ -0.07
PCDHGA11-201ENST00000398587 GLP2RO95838 553 aa14.6□□□□□ -0.07
PCDHGA11-201ENST00000398587 TRUB2O95900 331 aaKnown RBP14.6□□□□□ -0.07
PCDHGA11-201ENST00000398587 ITGAVP06756 1048 aa14.6□□□□□ -0.07
PCDHGA11-201ENST00000398587 EPHB3P54753 998 aa14.6□□□□□ -0.07
PCDHGA11-201ENST00000398587 LRRC36Q1X8D7 754 aa14.6□□□□□ -0.07
PCDHGA11-201ENST00000398587 GRTP1Q5TC63 336 aa14.6□□□□□ -0.07
PCDHGA11-201ENST00000398587 ALLCQ8N6M5 410 aa14.6□□□□□ -0.07
PCDHGA11-201ENST00000398587 PPTC7Q8NI37 304 aa14.6□□□□□ -0.07
PCDHGA11-201ENST00000398587 TKTL2Q9H0I9 626 aa14.6□□□□□ -0.07
PCDHGA11-201ENST00000398587 WDR27A2RRH5 827 aa14.6□□□□□ -0.07
PCDHGA11-201ENST00000398587 RTN3O95197 1032 aaPredicted RBP14.6□□□□□ -0.07
PCDHGA11-201ENST00000398587 MPOP05164 745 aa14.6□□□□□ -0.07
PCDHGA11-201ENST00000398587 MMP8P22894 467 aa14.6□□□□□ -0.07
PCDHGA11-201ENST00000398587 MLH1P40692 756 aa14.6□□□□□ -0.07
PCDHGA11-201ENST00000398587 ZNF280AP59817 542 aaPredicted RBP14.6□□□□□ -0.07
PCDHGA11-201ENST00000398587 ILF2Q12905 390 aaKnown RBP14.6□□□□□ -0.07
PCDHGA11-201ENST00000398587 PARP6Q2NL67 630 aa14.6□□□□□ -0.07
PCDHGA11-201ENST00000398587 TTMPQ5BVD1 217 aa14.6□□□□□ -0.07
PCDHGA11-201ENST00000398587 WNK4Q96J92 1243 aa14.6□□□□□ -0.07
PCDHGA11-201ENST00000398587 SRPK1Q96SB4 655 aaKnown RBP14.6□□□□□ -0.07
PCDHGA11-201ENST00000398587 ADGRE3Q9BY15 652 aa14.6□□□□□ -0.07
PCDHGA11-201ENST00000398587 SCUBE2Q9NQ36 999 aa14.6□□□□□ -0.07
PCDHGA11-201ENST00000398587 COL1A2P08123 1366 aa14.6□□□□□ -0.07
PCDHGA11-201ENST00000398587 hCG_1818297A0A087WSY0 165 aa14.6□□□□□ -0.07
PCDHGA11-201ENST00000398587 NUDT2P50583 147 aa14.6□□□□□ -0.07
PCDHGA11-201ENST00000398587 ATN1P54259 1190 aaPredicted RBP14.6□□□□□ -0.07
PCDHGA11-201ENST00000398587 RHOAP61586 193 aa14.6□□□□□ -0.07
PCDHGA11-201ENST00000398587 MRPS6P82932 125 aaKnown RBP14.6□□□□□ -0.07
PCDHGA11-201ENST00000398587 RASA2Q15283 850 aa14.6□□□□□ -0.07
PCDHGA11-201ENST00000398587 AASDHQ4L235 1098 aaPredicted RBP14.6□□□□□ -0.07
PCDHGA11-201ENST00000398587 TTC30AQ86WT1 665 aa14.6□□□□□ -0.07
PCDHGA11-201ENST00000398587 B3GALNT2Q8NCR0 500 aa14.6□□□□□ -0.07
PCDHGA11-201ENST00000398587 ZSWIM2Q8NEG5 633 aa14.6□□□□□ -0.07
PCDHGA11-201ENST00000398587 C18orf25Q96B23 403 aaPredicted RBP14.6□□□□□ -0.07
PCDHGA11-201ENST00000398587 SHCBP1LQ9BZQ2 653 aa14.6□□□□□ -0.07
PCDHGA11-201ENST00000398587 EFCAB1Q9HAE3 211 aa14.6□□□□□ -0.07
PCDHGA11-201ENST00000398587 RNF19AQ9NV58 838 aa14.6□□□□□ -0.07
PCDHGA11-201ENST00000398587 ETNK2Q9NVF9 386 aa14.6□□□□□ -0.07
PCDHGA11-201ENST00000398587 RNF112Q9ULX5 631 aa14.6□□□□□ -0.07
PCDHGA11-201ENST00000398587 A0A0A0MRY4 1105 aa14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 TBKBP1A7MCY6 615 aa14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 AKAP10O43572 662 aa14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 NUDT17P0C025 328 aa14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 PAX3P23760 479 aa14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 RPL22P35268 128 aaKnown RBP14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 CRYBB1P53674 252 aaPredicted RBP14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 FAAP100Q0VG06 881 aa14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 NAB1Q13506 487 aa14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 N4BP2L1Q5TBK1 243 aaPredicted RBP14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 CAPRIN2Q6IMN6 1127 aaKnown RBP14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 TFAP2DQ7Z6R9 452 aa14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 TEX9Q8N6V9 391 aa14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 HELQQ8TDG4 1101 aa14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 ART4Q93070 314 aa14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 TUBGCP3Q96CW5 907 aa14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 FAM84AQ96KN4 292 aa14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 SPATA13Q96N96 652 aa14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 TRIM45Q9H8W5 580 aaPredicted RBP14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 DMAC2Q9NW81 257 aa14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 RASSF10A6NK89 507 aa14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 TPH1P17752 444 aa14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 DAB2IPQ5VWQ8 1189 aa14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 KCNMB4Q86W47 210 aa14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 HOMEZQ8IX15 550 aa14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 RASGEF1CQ8N431 466 aa14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 DDI1Q8WTU0 396 aa14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 PGLYRP2Q96PD5 576 aa14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 C10orf88Q9H8K7 445 aa14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 CDH9Q9ULB4 789 aa14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 KLRG2A4D1S0 409 aaPredicted RBP14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 TMEM191CA6NGB0 347 aa14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 CBX4O00257 560 aa14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 ZNF862O60290 1169 aa14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 SERPINE1P05121 402 aa14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 ATXN8OSP0DMR3 200 aa14.59□□□□□ -0.07
PCDHGA11-201ENST00000398587 ITGALP20701 1170 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms