RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 PTPN2P17706 415 aa15.48■□□□□ 0.07
CAPN3-207ENST00000397200 LMAN1P49257 510 aa15.48■□□□□ 0.07
CAPN3-207ENST00000397200 PSEN1P49768 467 aa15.48■□□□□ 0.07
CAPN3-207ENST00000397200 SLC25A11Q02978 314 aaKnown RBP15.48■□□□□ 0.07
CAPN3-207ENST00000397200 ADAM15Q13444 863 aa15.48■□□□□ 0.07
CAPN3-207ENST00000397200 TAZQ16635 292 aa15.48■□□□□ 0.07
CAPN3-207ENST00000397200 BSPRYQ5W0U4 402 aa15.48■□□□□ 0.07
CAPN3-207ENST00000397200 BTBD8Q5XKL5 378 aa15.48■□□□□ 0.07
CAPN3-207ENST00000397200 HFE2Q6ZVN8 426 aa15.48■□□□□ 0.07
CAPN3-207ENST00000397200 Q7L0L9 218 aa15.48■□□□□ 0.07
CAPN3-207ENST00000397200 C12orf76Q8N812 135 aaPredicted RBP15.48■□□□□ 0.07
CAPN3-207ENST00000397200 CMASQ8NFW8 434 aaPredicted RBP15.48■□□□□ 0.07
CAPN3-207ENST00000397200 JOSD2Q8TAC2 188 aa15.48■□□□□ 0.07
CAPN3-207ENST00000397200 KHSRPQ92945 711 aaKnown RBP eCLIP15.48■□□□□ 0.07
CAPN3-207ENST00000397200 ATP6V1G3Q96LB4 118 aa15.48■□□□□ 0.07
CAPN3-207ENST00000397200 PIDD1Q9HB75 910 aa15.48■□□□□ 0.07
CAPN3-207ENST00000397200 ZNF334Q9HCZ1 680 aaPredicted RBP15.48■□□□□ 0.07
CAPN3-207ENST00000397200 TRPM5Q9NZQ8 1165 aa15.48■□□□□ 0.07
CAPN3-207ENST00000397200 FEZ2Q9UHY8 353 aaPredicted RBP15.48■□□□□ 0.07
CAPN3-207ENST00000397200 CAPN9O14815 690 aa15.47■□□□□ 0.07
CAPN3-207ENST00000397200 IVDP26440 423 aa15.47■□□□□ 0.07
CAPN3-207ENST00000397200 RFC1P35251 1148 aaPredicted RBP15.47■□□□□ 0.07
CAPN3-207ENST00000397200 CETN2P41208 172 aa15.47■□□□□ 0.07
CAPN3-207ENST00000397200 PPP3CCP48454 512 aa15.47■□□□□ 0.07
CAPN3-207ENST00000397200 PLTPP55058 493 aa15.47■□□□□ 0.07
CAPN3-207ENST00000397200 EIF3BP55884 814 aaKnown RBP15.47■□□□□ 0.07
CAPN3-207ENST00000397200 ACAP1Q15027 740 aa15.47■□□□□ 0.07
CAPN3-207ENST00000397200 KCTD19Q17RG1 926 aaPredicted RBP15.47■□□□□ 0.07
CAPN3-207ENST00000397200 ANKRD54Q6NXT1 300 aa15.47■□□□□ 0.07
CAPN3-207ENST00000397200 TMC5Q6UXY8 1006 aa15.47■□□□□ 0.07
CAPN3-207ENST00000397200 ARCQ7LC44 396 aa15.47■□□□□ 0.07
CAPN3-207ENST00000397200 SCD5Q86SK9 330 aa15.47■□□□□ 0.07
CAPN3-207ENST00000397200 TMC8Q8IU68 726 aa15.47■□□□□ 0.07
CAPN3-207ENST00000397200 CCDC50Q8IVM0 306 aa15.47■□□□□ 0.07
CAPN3-207ENST00000397200 HS6ST3Q8IZP7 471 aa15.47■□□□□ 0.07
CAPN3-207ENST00000397200 EMC1Q8N766 993 aa15.47■□□□□ 0.07
CAPN3-207ENST00000397200 MYLIPQ8WY64 445 aa15.47■□□□□ 0.07
CAPN3-207ENST00000397200 SMG7Q92540 1137 aaKnown RBP15.47■□□□□ 0.07
CAPN3-207ENST00000397200 ZNF707Q96C28 371 aaPredicted RBP15.47■□□□□ 0.07
CAPN3-207ENST00000397200 PABPC3Q9H361 631 aaKnown RBP15.47■□□□□ 0.07
CAPN3-207ENST00000397200 NMUR1Q9HB89 426 aa15.47■□□□□ 0.07
CAPN3-207ENST00000397200 ABCC13Q9NSE7 274 aa15.47■□□□□ 0.07
CAPN3-207ENST00000397200 HCFC1R1Q9NWW0 138 aa15.47■□□□□ 0.07
CAPN3-207ENST00000397200 CLDND1Q9NY35 253 aa15.47■□□□□ 0.07
CAPN3-207ENST00000397200 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.47■□□□□ 0.07
CAPN3-207ENST00000397200 MTRF1LQ9UGC7 380 aaKnown RBP15.47■□□□□ 0.07
CAPN3-207ENST00000397200 EFR3BQ9Y2G0 817 aa15.47■□□□□ 0.07
CAPN3-207ENST00000397200 OBSL1O75147 1896 aa15.47■□□□□ 0.07
CAPN3-207ENST00000397200 FGF19O95750 216 aa15.46■□□□□ 0.07
CAPN3-207ENST00000397200 GAS8O95995 478 aa15.46■□□□□ 0.07
CAPN3-207ENST00000397200 KRT1P04264 644 aa15.46■□□□□ 0.07
CAPN3-207ENST00000397200 ZDHHC11BP0C7U3 371 aa15.46■□□□□ 0.07
CAPN3-207ENST00000397200 MYL4P12829 197 aa15.46■□□□□ 0.07
CAPN3-207ENST00000397200 NCAM1P13591 858 aa15.46■□□□□ 0.07
CAPN3-207ENST00000397200 PDGFRAP16234 1089 aa15.46■□□□□ 0.07
CAPN3-207ENST00000397200 GPD1P21695 349 aa15.46■□□□□ 0.07
CAPN3-207ENST00000397200 GABRR2P28476 465 aa15.46■□□□□ 0.07
CAPN3-207ENST00000397200 PABPC1LQ4VXU2 614 aaKnown RBP15.46■□□□□ 0.07
CAPN3-207ENST00000397200 CEP85LQ5SZL2 805 aa15.46■□□□□ 0.07
CAPN3-207ENST00000397200 RARS2Q5T160 578 aaKnown RBP15.46■□□□□ 0.07
CAPN3-207ENST00000397200 AGBL2Q5U5Z8 902 aa15.46■□□□□ 0.07
CAPN3-207ENST00000397200 KDM7AQ6ZMT4 941 aa15.46■□□□□ 0.07
CAPN3-207ENST00000397200 SPOCD1Q6ZMY3 1216 aa15.46■□□□□ 0.07
CAPN3-207ENST00000397200 EP400NLQ6ZTU2 488 aa15.46■□□□□ 0.07
CAPN3-207ENST00000397200 DEFB106AQ8N104 65 aa15.46■□□□□ 0.07
CAPN3-207ENST00000397200 DEFB123Q8N688 67 aa15.46■□□□□ 0.07
CAPN3-207ENST00000397200 LEMD2Q8NC56 503 aa15.46■□□□□ 0.07
CAPN3-207ENST00000397200 ATL2Q8NHH9 583 aa15.46■□□□□ 0.07
CAPN3-207ENST00000397200 UBLCP1Q8WVY7 318 aaPredicted RBP15.46■□□□□ 0.07
CAPN3-207ENST00000397200 ATG4AQ8WYN0 398 aa15.46■□□□□ 0.07
CAPN3-207ENST00000397200 EDEM1Q92611 657 aa15.46■□□□□ 0.07
CAPN3-207ENST00000397200 SLC2A13Q96QE2 648 aa15.46■□□□□ 0.07
CAPN3-207ENST00000397200 GCNAQ96QF7 691 aa15.46■□□□□ 0.07
CAPN3-207ENST00000397200 CDX2Q99626 313 aaPredicted RBP15.46■□□□□ 0.07
CAPN3-207ENST00000397200 LRRC3Q9BY71 257 aa15.46■□□□□ 0.07
CAPN3-207ENST00000397200 CLIC5Q9NZA1 410 aa15.46■□□□□ 0.07
CAPN3-207ENST00000397200 DNMT3BQ9UBC3 853 aaKnown RBP15.46■□□□□ 0.07
CAPN3-207ENST00000397200 DENND4CQ5VZ89 1909 aa15.46■□□□□ 0.07
CAPN3-207ENST00000397200 hCG_1818297A0A087WSY0 165 aa15.46■□□□□ 0.06
CAPN3-207ENST00000397200 ZNF840PA6NDX5 716 aa15.46■□□□□ 0.06
CAPN3-207ENST00000397200 C3orf70A6NLC5 250 aaPredicted RBP15.46■□□□□ 0.06
CAPN3-207ENST00000397200 C2CD4BA6NLJ0 364 aa15.46■□□□□ 0.06
CAPN3-207ENST00000397200 LRCH4O75427 683 aa15.46■□□□□ 0.06
CAPN3-207ENST00000397200 PAPLNO95428 1278 aa15.46■□□□□ 0.06
CAPN3-207ENST00000397200 F11P03951 625 aa15.46■□□□□ 0.06
CAPN3-207ENST00000397200 RHOP08100 348 aa15.46■□□□□ 0.06
CAPN3-207ENST00000397200 HOXB8P17481 243 aaPredicted RBP15.46■□□□□ 0.06
CAPN3-207ENST00000397200 DESP17661 470 aa15.46■□□□□ 0.06
CAPN3-207ENST00000397200 ITIH2P19823 946 aa15.46■□□□□ 0.06
CAPN3-207ENST00000397200 PSMA2P25787 234 aa15.46■□□□□ 0.06
CAPN3-207ENST00000397200 CDC25CP30307 473 aa15.46■□□□□ 0.06
CAPN3-207ENST00000397200 SDC4P31431 198 aa15.46■□□□□ 0.06
CAPN3-207ENST00000397200 NOS2P35228 1153 aa15.46■□□□□ 0.06
CAPN3-207ENST00000397200 MATKP42679 507 aa15.46■□□□□ 0.06
CAPN3-207ENST00000397200 CDKN2BP42772 138 aa15.46■□□□□ 0.06
CAPN3-207ENST00000397200 PGFP49763 221 aa15.46■□□□□ 0.06
CAPN3-207ENST00000397200 PMS2P54278 862 aa15.46■□□□□ 0.06
CAPN3-207ENST00000397200 PPP1R7Q15435 360 aa15.46■□□□□ 0.06
CAPN3-207ENST00000397200 ATP13A4Q4VNC1 1196 aa15.46■□□□□ 0.06
CAPN3-207ENST00000397200 DCAF6Q58WW2 860 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms