RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 CIPCQ9C0C6 399 aa8.85□□□□□ -0.99
SCFD1-202ENST00000396629 FBRSQ9HAH7 460 aa8.85□□□□□ -0.99
SCFD1-202ENST00000396629 PNPLA8Q9NP80 782 aa8.85□□□□□ -0.99
SCFD1-202ENST00000396629 AGPAT3Q9NRZ7 376 aa8.85□□□□□ -0.99
SCFD1-202ENST00000396629 AGO1Q9UL18 857 aaKnown RBP8.85□□□□□ -0.99
SCFD1-202ENST00000396629 NAV2Q8IVL1 2488 aa8.85□□□□□ -0.99
SCFD1-202ENST00000396629 BRINP1O60477 761 aa8.85□□□□□ -0.99
SCFD1-202ENST00000396629 CYBBP04839 570 aa8.85□□□□□ -0.99
SCFD1-202ENST00000396629 ACTN2P35609 894 aa8.85□□□□□ -0.99
SCFD1-202ENST00000396629 PSEN1P49768 467 aa8.85□□□□□ -0.99
SCFD1-202ENST00000396629 C21orf59P57076 290 aa8.85□□□□□ -0.99
SCFD1-202ENST00000396629 SNRPFP62306 86 aaKnown RBP8.85□□□□□ -0.99
SCFD1-202ENST00000396629 CXADRP78310 365 aa8.85□□□□□ -0.99
SCFD1-202ENST00000396629 COG7P83436 770 aa8.85□□□□□ -0.99
SCFD1-202ENST00000396629 ILKQ13418 452 aa8.85□□□□□ -0.99
SCFD1-202ENST00000396629 ZNF699Q32M78 642 aa8.85□□□□□ -0.99
SCFD1-202ENST00000396629 TBC1D25Q3MII6 688 aa8.85□□□□□ -0.99
SCFD1-202ENST00000396629 KIAA0895LQ68EN5 471 aa8.85□□□□□ -0.99
SCFD1-202ENST00000396629 CCDC73Q6ZRK6 1079 aa8.85□□□□□ -0.99
SCFD1-202ENST00000396629 CLEC20AQ6ZU45 233 aa8.85□□□□□ -0.99
SCFD1-202ENST00000396629 TADA2BQ86TJ2 420 aa8.85□□□□□ -0.99
SCFD1-202ENST00000396629 ERICH1Q86X53 443 aa8.85□□□□□ -0.99
SCFD1-202ENST00000396629 FAM217AQ8IXS0 508 aa8.85□□□□□ -0.99
SCFD1-202ENST00000396629 PIP4P2Q8N4L2 257 aa8.85□□□□□ -0.99
SCFD1-202ENST00000396629 XXYLT1Q8NBI6 393 aa8.85□□□□□ -0.99
SCFD1-202ENST00000396629 RFFLQ8WZ73 363 aa8.85□□□□□ -0.99
SCFD1-202ENST00000396629 HPS3Q969F9 1004 aa8.85□□□□□ -0.99
SCFD1-202ENST00000396629 ACE2Q9BYF1 805 aaPredicted RBP8.85□□□□□ -0.99
SCFD1-202ENST00000396629 CLMPQ9H6B4 373 aa8.85□□□□□ -0.99
SCFD1-202ENST00000396629 CLIC5Q9NZA1 410 aa8.85□□□□□ -0.99
SCFD1-202ENST00000396629 CLIC4Q9Y696 253 aa8.85□□□□□ -0.99
SCFD1-202ENST00000396629 A0A087X0B3 334 aa8.84□□□□□ -0.99
SCFD1-202ENST00000396629 A0A1W2PPC4 97 aa8.84□□□□□ -0.99
SCFD1-202ENST00000396629 C10orf142B7Z368 130 aa8.84□□□□□ -0.99
SCFD1-202ENST00000396629 CLIC2O15247 247 aa8.84□□□□□ -0.99
SCFD1-202ENST00000396629 YKT6O15498 198 aa8.84□□□□□ -0.99
SCFD1-202ENST00000396629 PHACTR2O75167 634 aa8.84□□□□□ -0.99
SCFD1-202ENST00000396629 WNT1P04628 370 aa8.84□□□□□ -0.99
SCFD1-202ENST00000396629 ITGAVP06756 1048 aa8.84□□□□□ -0.99
SCFD1-202ENST00000396629 FAM200BP0CF97 657 aa8.84□□□□□ -0.99
SCFD1-202ENST00000396629 CORO1AP31146 461 aaKnown RBP8.84□□□□□ -0.99
SCFD1-202ENST00000396629 TXLNAP40222 546 aa8.84□□□□□ -0.99
SCFD1-202ENST00000396629 KIF11P52732 1056 aa8.84□□□□□ -0.99
SCFD1-202ENST00000396629 RHDQ02161 417 aa8.84□□□□□ -0.99
SCFD1-202ENST00000396629 ARID5AQ03989 594 aa8.84□□□□□ -0.99
SCFD1-202ENST00000396629 CCDC173Q0VFZ6 552 aa8.84□□□□□ -0.99
SCFD1-202ENST00000396629 PKDCCQ504Y2 493 aa8.84□□□□□ -0.99
SCFD1-202ENST00000396629 SCARA5Q6ZMJ2 495 aa8.84□□□□□ -0.99
SCFD1-202ENST00000396629 CCDC186Q7Z3E2 898 aa8.84□□□□□ -0.99
SCFD1-202ENST00000396629 KIAA0907Q7Z7F0 614 aaPredicted RBP8.84□□□□□ -0.99
SCFD1-202ENST00000396629 UNC93AQ86WB7 457 aa8.84□□□□□ -0.99
SCFD1-202ENST00000396629 EID2Q8N6I1 236 aa8.84□□□□□ -0.99
SCFD1-202ENST00000396629 C12orf29Q8N999 325 aa8.84□□□□□ -0.99
SCFD1-202ENST00000396629 PLEKHO2Q8TD55 490 aa8.84□□□□□ -0.99
SCFD1-202ENST00000396629 CLIC6Q96NY7 704 aa8.84□□□□□ -0.99
SCFD1-202ENST00000396629 CDK5RAP1Q96SZ6 601 aaKnown RBP8.84□□□□□ -0.99
SCFD1-202ENST00000396629 HNRNPABQ99729 332 aaKnown RBP8.84□□□□□ -0.99
SCFD1-202ENST00000396629 PRSS16Q9NQE7 514 aa8.84□□□□□ -0.99
SCFD1-202ENST00000396629 HMGXB4Q9UGU5 601 aa8.84□□□□□ -0.99
SCFD1-202ENST00000396629 NAGPAQ9UK23 515 aa8.84□□□□□ -0.99
SCFD1-202ENST00000396629 USP3Q9Y6I4 520 aa8.84□□□□□ -0.99
SCFD1-202ENST00000396629 MGAQ8IWI9 3026 aa8.84□□□□□ -0.99
SCFD1-202ENST00000396629 ARID1BQ8NFD5 2236 aaPredicted RBP8.84□□□□□ -0.99
SCFD1-202ENST00000396629 ATMQ13315 3056 aa8.83□□□□□ -1
SCFD1-202ENST00000396629 ARHGAP6O43182 974 aa8.83□□□□□ -1
SCFD1-202ENST00000396629 VNN1O95497 513 aa8.83□□□□□ -1
SCFD1-202ENST00000396629 C4BPAP04003 597 aaKnown RBP8.83□□□□□ -1
SCFD1-202ENST00000396629 DNTTP04053 509 aa8.83□□□□□ -1
SCFD1-202ENST00000396629 RALAP11233 206 aa8.83□□□□□ -1
SCFD1-202ENST00000396629 ABCB4P21439 1286 aa8.83□□□□□ -1
SCFD1-202ENST00000396629 ADORA2BP29275 332 aa8.83□□□□□ -1
SCFD1-202ENST00000396629 STAT6P42226 847 aa8.83□□□□□ -1
SCFD1-202ENST00000396629 CYP2J2P51589 502 aa8.83□□□□□ -1
SCFD1-202ENST00000396629 NDST1P52848 882 aa8.83□□□□□ -1
SCFD1-202ENST00000396629 AP3M2P53677 418 aa8.83□□□□□ -1
SCFD1-202ENST00000396629 CLDN10P78369 228 aa8.83□□□□□ -1
SCFD1-202ENST00000396629 KCNH2Q12809 1159 aa8.83□□□□□ -1
SCFD1-202ENST00000396629 FNDC3BQ53EP0 1204 aaKnown RBP8.83□□□□□ -1
SCFD1-202ENST00000396629 TAF1BQ53T94 588 aaPredicted RBP8.83□□□□□ -1
SCFD1-202ENST00000396629 PRAMEF14Q5SWL7 426 aa8.83□□□□□ -1
SCFD1-202ENST00000396629 FMNL3Q8IVF7 1028 aa8.83□□□□□ -1
SCFD1-202ENST00000396629 WFIKKN2Q8TEU8 576 aa8.83□□□□□ -1
SCFD1-202ENST00000396629 SKA1Q96BD8 255 aa8.83□□□□□ -1
SCFD1-202ENST00000396629 ELMO3Q96BJ8 720 aa8.83□□□□□ -1
SCFD1-202ENST00000396629 SLC6A18Q96N87 628 aa8.83□□□□□ -1
SCFD1-202ENST00000396629 EBF2Q9HAK2 575 aa8.83□□□□□ -1
SCFD1-202ENST00000396629 FAM49BQ9NUQ9 324 aa8.83□□□□□ -1
SCFD1-202ENST00000396629 RASAL2Q9UJF2 1139 aa8.83□□□□□ -1
SCFD1-202ENST00000396629 NYNRINQ9P2P1 1898 aaKnown RBP8.83□□□□□ -1
SCFD1-202ENST00000396629 UBE4BO95155 1302 aa8.83□□□□□ -1
SCFD1-202ENST00000396629 A0A1W2PR77 199 aa8.83□□□□□ -1
SCFD1-202ENST00000396629 B8ZZF3 427 aa8.83□□□□□ -1
SCFD1-202ENST00000396629 HMBSP08397 361 aa8.83□□□□□ -1
SCFD1-202ENST00000396629 GLDCP23378 1020 aa8.83□□□□□ -1
SCFD1-202ENST00000396629 EPHA8P29322 1005 aaPredicted RBP8.83□□□□□ -1
SCFD1-202ENST00000396629 CASP4P49662 377 aa8.83□□□□□ -1
SCFD1-202ENST00000396629 KCNC4Q03721 635 aa8.83□□□□□ -1
SCFD1-202ENST00000396629 NCOA4Q13772 614 aa8.83□□□□□ -1
SCFD1-202ENST00000396629 TTC31Q49AM3 519 aaPredicted RBP8.83□□□□□ -1
SCFD1-202ENST00000396629 USP30Q70CQ3 517 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms