RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 RRHO14718 337 aa4.75□□□□□ -1.65
CMC1-202ENST00000396610 SLC3A2P08195 630 aaKnown RBP4.75□□□□□ -1.65
CMC1-202ENST00000396610 PEPDP12955 493 aa4.75□□□□□ -1.65
CMC1-202ENST00000396610 DUSP1P28562 367 aa4.75□□□□□ -1.65
CMC1-202ENST00000396610 SLC8A1P32418 973 aa4.75□□□□□ -1.65
CMC1-202ENST00000396610 SERPINF1P36955 418 aa4.75□□□□□ -1.65
CMC1-202ENST00000396610 VPS41P49754 854 aa4.75□□□□□ -1.65
CMC1-202ENST00000396610 FAM3BP58499 235 aaPredicted RBP4.75□□□□□ -1.65
CMC1-202ENST00000396610 YPEL5P62699 121 aa4.75□□□□□ -1.65
CMC1-202ENST00000396610 CBFBQ13951 182 aa4.75□□□□□ -1.65
CMC1-202ENST00000396610 CCDC38Q502W7 563 aa4.75□□□□□ -1.65
CMC1-202ENST00000396610 FAM83BQ5T0W9 1011 aa4.75□□□□□ -1.65
CMC1-202ENST00000396610 ANKRD40Q6AI12 368 aa4.75□□□□□ -1.65
CMC1-202ENST00000396610 SULT6B1Q6IMI4 303 aa4.75□□□□□ -1.65
CMC1-202ENST00000396610 MIS18BP1Q6P0N0 1132 aa4.75□□□□□ -1.65
CMC1-202ENST00000396610 TFAP2DQ7Z6R9 452 aa4.75□□□□□ -1.65
CMC1-202ENST00000396610 NEK8Q86SG6 692 aa4.75□□□□□ -1.65
CMC1-202ENST00000396610 TRABD2AQ86V40 505 aa4.75□□□□□ -1.65
CMC1-202ENST00000396610 CNGA4Q8IV77 575 aa4.75□□□□□ -1.65
CMC1-202ENST00000396610 NRSN1Q8IZ57 195 aa4.75□□□□□ -1.65
CMC1-202ENST00000396610 GLMPQ8WWB7 406 aa4.75□□□□□ -1.65
CMC1-202ENST00000396610 RTKNQ9BST9 563 aa4.75□□□□□ -1.65
CMC1-202ENST00000396610 NUAK2Q9H093 628 aa4.75□□□□□ -1.65
CMC1-202ENST00000396610 ARL8BQ9NVJ2 186 aa4.75□□□□□ -1.65
CMC1-202ENST00000396610 ASNSD1Q9NWL6 643 aa4.75□□□□□ -1.65
CMC1-202ENST00000396610 SPATA31A1Q5TZJ5 1347 aa4.74□□□□□ -1.65
CMC1-202ENST00000396610 WDR17Q8IZU2 1322 aa4.74□□□□□ -1.65
CMC1-202ENST00000396610 LOC105369274A0A096LPK9 316 aa4.74□□□□□ -1.65
CMC1-202ENST00000396610 LOC102723532A0A0G2JNH3 316 aa4.74□□□□□ -1.65
CMC1-202ENST00000396610 SMIM35A0A1B0GVV1 85 aa4.74□□□□□ -1.65
CMC1-202ENST00000396610 FAM90A18PA6NE21 464 aa4.74□□□□□ -1.65
CMC1-202ENST00000396610 FAM90A16PA6NEW6 464 aa4.74□□□□□ -1.65
CMC1-202ENST00000396610 FAM90A9PA6NNJ1 464 aa4.74□□□□□ -1.65
CMC1-202ENST00000396610 FAM90A5PA8MXJ8 464 aa4.74□□□□□ -1.65
CMC1-202ENST00000396610 PPP6R2O75170 966 aa4.74□□□□□ -1.65
CMC1-202ENST00000396610 ACTL6BO94805 426 aa4.74□□□□□ -1.65
CMC1-202ENST00000396610 ITGA2BP08514 1039 aa4.74□□□□□ -1.65
CMC1-202ENST00000396610 FAM90A15PP0C7V4 464 aa4.74□□□□□ -1.65
CMC1-202ENST00000396610 FAM90A14PP0C7W9 464 aa4.74□□□□□ -1.65
CMC1-202ENST00000396610 PRR35P0CG20 571 aa4.74□□□□□ -1.65
CMC1-202ENST00000396610 CHKAP35790 457 aa4.74□□□□□ -1.65
CMC1-202ENST00000396610 AGTR2P50052 363 aa4.74□□□□□ -1.65
CMC1-202ENST00000396610 PNLIPRP1P54315 467 aa4.74□□□□□ -1.65
CMC1-202ENST00000396610 SF3A3Q12874 501 aaKnown RBP eCLIP4.74□□□□□ -1.65
CMC1-202ENST00000396610 EZH2Q15910 746 aaKnown RBP4.74□□□□□ -1.65
CMC1-202ENST00000396610 PFKFB3Q16875 520 aaPredicted RBP4.74□□□□□ -1.65
CMC1-202ENST00000396610 AAK1Q2M2I8 961 aa4.74□□□□□ -1.65
CMC1-202ENST00000396610 SLC18B1Q6NT16 456 aa4.74□□□□□ -1.65
CMC1-202ENST00000396610 SLC2A7Q6PXP3 512 aa4.74□□□□□ -1.65
CMC1-202ENST00000396610 OR4N4Q8N0Y3 316 aa4.74□□□□□ -1.65
CMC1-202ENST00000396610 WDR60Q8WVS4 1066 aa4.74□□□□□ -1.65
CMC1-202ENST00000396610 MAP4K1Q92918 833 aa4.74□□□□□ -1.65
CMC1-202ENST00000396610 FAR2Q96K12 515 aa4.74□□□□□ -1.65
CMC1-202ENST00000396610 MECRQ9BV79 373 aa4.74□□□□□ -1.65
CMC1-202ENST00000396610 SEMA4CQ9C0C4 833 aa4.74□□□□□ -1.65
CMC1-202ENST00000396610 MAGEH1Q9H213 219 aa4.74□□□□□ -1.65
CMC1-202ENST00000396610 MLXIPQ9HAP2 919 aa4.74□□□□□ -1.65
CMC1-202ENST00000396610 SIRT4Q9Y6E7 314 aaPredicted RBP4.74□□□□□ -1.65
CMC1-202ENST00000396610 FNDC1Q4ZHG4 1894 aaPredicted RBP4.74□□□□□ -1.65
CMC1-202ENST00000396610 NKX2-8O15522 239 aa4.73□□□□□ -1.65
CMC1-202ENST00000396610 BCAR3O75815 825 aa4.73□□□□□ -1.65
CMC1-202ENST00000396610 VEGFAP15692 232 aaPredicted RBP4.73□□□□□ -1.65
CMC1-202ENST00000396610 SFPQP23246 707 aaKnown RBP eCLIP4.73□□□□□ -1.65
CMC1-202ENST00000396610 TACR3P29371 465 aa4.73□□□□□ -1.65
CMC1-202ENST00000396610 STAT6P42226 847 aa4.73□□□□□ -1.65
CMC1-202ENST00000396610 ABCG1P45844 678 aa4.73□□□□□ -1.65
CMC1-202ENST00000396610 TAS2R50P59544 299 aa4.73□□□□□ -1.65
CMC1-202ENST00000396610 RNASELQ05823 741 aaKnown RBP4.73□□□□□ -1.65
CMC1-202ENST00000396610 KRT72Q14CN4 511 aa4.73□□□□□ -1.65
CMC1-202ENST00000396610 SRSF7Q16629 238 aaKnown RBP eCLIP4.73□□□□□ -1.65
CMC1-202ENST00000396610 ZNF626Q68DY1 528 aa4.73□□□□□ -1.65
CMC1-202ENST00000396610 ERAP2Q6P179 960 aa4.73□□□□□ -1.65
CMC1-202ENST00000396610 KLHL17Q6TDP4 642 aa4.73□□□□□ -1.65
CMC1-202ENST00000396610 C16orf71Q8IYS4 520 aaPredicted RBP4.73□□□□□ -1.65
CMC1-202ENST00000396610 STT3BQ8TCJ2 826 aa4.73□□□□□ -1.65
CMC1-202ENST00000396610 ASB12Q8WXK4 309 aa4.73□□□□□ -1.65
CMC1-202ENST00000396610 VOPP1Q96AW1 172 aa4.73□□□□□ -1.65
CMC1-202ENST00000396610 EID2BQ96D98 161 aa4.73□□□□□ -1.65
CMC1-202ENST00000396610 TRMT61AQ96FX7 289 aaKnown RBP4.73□□□□□ -1.65
CMC1-202ENST00000396610 REXO5Q96IC2 774 aaKnown RBP4.73□□□□□ -1.65
CMC1-202ENST00000396610 FAM118BQ9BPY3 351 aa4.73□□□□□ -1.65
CMC1-202ENST00000396610 TM2D2Q9BX73 214 aa4.73□□□□□ -1.65
CMC1-202ENST00000396610 CCDC134Q9H6E4 229 aa4.73□□□□□ -1.65
CMC1-202ENST00000396610 MLXIPLQ9NP71 852 aa4.73□□□□□ -1.65
CMC1-202ENST00000396610 RAB21Q9UL25 225 aa4.73□□□□□ -1.65
CMC1-202ENST00000396610 TRPC5Q9UL62 973 aaPredicted RBP4.73□□□□□ -1.65
CMC1-202ENST00000396610 MAFFQ9ULX9 164 aa4.73□□□□□ -1.65
CMC1-202ENST00000396610 NFU1Q9UMS0 254 aa4.73□□□□□ -1.65
CMC1-202ENST00000396610 CNTN6Q9UQ52 1028 aa4.73□□□□□ -1.65
CMC1-202ENST00000396610 HEMK1Q9Y5R4 338 aaPredicted RBP4.73□□□□□ -1.65
CMC1-202ENST00000396610 SLC38A8A6NNN8 435 aa4.72□□□□□ -1.65
CMC1-202ENST00000396610 TTC34A8MYJ7 566 aa4.72□□□□□ -1.65
CMC1-202ENST00000396610 KCNU1A8MYU2 1149 aa4.72□□□□□ -1.65
CMC1-202ENST00000396610 DSCR3O14972 297 aa4.72□□□□□ -1.65
CMC1-202ENST00000396610 INPPL1O15357 1258 aa4.72□□□□□ -1.65
CMC1-202ENST00000396610 KAT7O95251 611 aa4.72□□□□□ -1.65
CMC1-202ENST00000396610 ST6GAL1P15907 406 aa4.72□□□□□ -1.65
CMC1-202ENST00000396610 ATP5F1P24539 256 aaPredicted RBP4.72□□□□□ -1.65
CMC1-202ENST00000396610 HOXD12P35452 270 aa4.72□□□□□ -1.65
CMC1-202ENST00000396610 IDUAP35475 653 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms